Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 3.1e-229 798.1 400 100.0
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.8e-176 622.9 397 78.3
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 3.1e-173 612.1 403 76.9
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 9.4e-146 520.8 359 72.4
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 2.4e-141 506.1 382 68.3
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 9.1e-141 504.2 382 69.1
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 2.7e-140 502.7 391 66.8
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 2.9e-139 499.2 379 70.4
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 2.5e-138 496.1 384 64.6
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.5e-138 496.1 359 70.5
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.2e-137 493.8 393 65.6
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.2e-137 493.8 374 65.8
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 1.2e-135 487.3 385 64.4
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 1.5e-135 486.9 372 67.2
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 4.4e-135 485.3 383 63.7
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 4.4e-135 485.3 372 66.1
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 4.1e-133 478.8 363 67.2
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 4.1e-133 478.8 322 72.4
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 2.0e-132 476.5 362 66.9
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 4.5e-132 475.3 363 66.9
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 3.8e-131 472.2 341 67.7
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 5.0e-131 471.9 382 65.2
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 1.5e-130 470.3 385 62.6
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.9e-130 469.9 373 65.4
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.9e-130 469.9 394 63.2
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.6e-130 468.4 374 64.7
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 5.6e-130 468.4 401 62.3
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 1.2e-129 467.2 372 66.7
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 2.1e-129 466.5 367 63.8
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 3.6e-129 465.7 374 64.4
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 4.7e-129 465.3 339 67.3
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 8.0e-129 464.5 387 63.3
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 8.0e-129 464.5 369 62.3
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 1.0e-128 464.2 397 61.5
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.4e-128 463.8 388 61.9
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 1.4e-128 463.8 376 62.2
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.3e-128 463.0 361 65.9
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 3.0e-128 462.6 360 64.7
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.8e-128 461.5 373 63.8
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 8.9e-128 461.1 396 60.4
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 9.8e-127 457.6 314 70.4
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.3e-126 457.2 387 61.2
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 1.3e-126 457.2 356 67.1
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 2.2e-126 456.4 376 63.0
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.8e-125 453.4 363 64.7
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 2.4e-125 453.0 368 62.0
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 1.2e-124 450.7 376 62.2
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 1.2e-124 450.7 374 61.0
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 1.2e-124 450.7 411 58.2
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.2e-124 450.7 328 64.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 1.6e-124 450.3 426 58.2
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 2.7e-124 449.5 364 63.5
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 3.5e-124 449.1 378 64.0
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 5.9e-124 448.4 359 63.5
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 5.9e-124 448.4 358 61.5
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 1.3e-123 447.2 363 63.9
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 3.0e-123 446.0 365 63.6
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 5.0e-123 445.3 301 70.4
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 6.6e-123 444.9 363 62.5
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 8.6e-123 444.5 366 62.8
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 1.9e-122 443.4 365 62.7
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 3.3e-122 442.6 365 63.3
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.1e-121 439.9 355 64.2
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 6.2e-121 438.3 356 62.9
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 6.2e-121 438.3 374 62.3
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 6.2e-121 438.3 368 60.6
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 6.2e-121 438.3 375 61.9
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 8.0e-121 438.0 355 63.7
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 1.0e-120 437.6 366 60.4
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 1.4e-120 437.2 369 60.7
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.4e-120 437.2 362 61.9
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.4e-120 437.2 357 64.1
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 1.8e-120 436.8 362 62.2
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.8e-120 436.8 369 59.9
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 4.0e-120 435.6 316 67.1
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 1.2e-119 434.1 383 59.8
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 5.8e-119 431.8 393 57.3
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.1e-117 427.6 388 58.5
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.1e-117 427.6 325 65.8
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 1.0e-115 421.0 375 57.9
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 8.1e-113 411.4 315 68.6
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 2.6e-111 406.4 274 71.9
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 4.4e-111 405.6 270 79.3
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.9e-109 400.2 352 59.4
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 6.0e-108 395.2 366 57.4
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 7.3e-106 388.3 332 59.3
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 7.3e-106 388.3 332 59.3
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.2e-103 380.9 372 54.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.9e-101 373.6 304 63.8
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 2.4e-101 373.2 307 63.8
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.6e-100 370.5 318 56.9
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 1.1e-98 364.4 322 57.5
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 9.6e-98 361.3 344 55.2
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.2e-97 360.9 309 56.6
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 4.7e-97 359.0 315 60.3
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 3.1e-96 356.3 309 58.6
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 8.9e-96 354.8 306 58.2
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 2.0e-95 353.6 388 51.3
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 6.0e-92 342.0 388 50.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 2.3e-91 340.1 230 70.9
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 3.0e-91 339.7 207 79.7
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 9.3e-85 318.2 235 64.7
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 7.6e-79 298.5 185 76.2
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 1.3e-70 271.2 167 76.0
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 1.1e-69 268.1 192 70.3
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 1.2e-68 264.6 428 38.6
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 1.1e-66 258.1 366 41.8
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 1.4e-61 241.1 147 78.2
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 4.6e-60 236.1 167 67.7
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.8e-51 207.6 216 52.8
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 5.5e-37 159.5 131 61.1
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 3.8e-30 136.7 97 69.1
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 9.5e-21 105.5 390 26.4
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.3e-19 100.9 57 86.0
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 6.3e-17 92.8 53 77.4
Cfa022494 Carpinus fangiana HOM05D002121 ORTHO05D008891 1.4e-16 91.7 219 31.5
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 1.2e-10 72.0 191 28.8
PRCOL_00004066 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 2.0e-10 71.2 155 31.0


User provided reference genes

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