Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 7.0e-136 487.3 241 100.0
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 3.5e-111 405.2 270 79.3
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.2e-90 337.0 268 65.3
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 1.2e-87 327.0 269 64.3
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.0e-78 297.4 242 63.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 1.3e-78 297.0 250 61.6
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 3.3e-77 292.4 267 59.2
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 5.6e-77 291.6 265 59.2
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 7.3e-77 291.2 263 56.7
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 2.1e-76 289.7 261 59.0
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 2.1e-76 289.7 262 59.2
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 3.6e-76 288.9 263 55.9
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 8.1e-76 287.7 263 55.5
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.1e-75 287.3 263 58.2
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 2.4e-75 286.2 262 59.9
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 2.4e-75 286.2 262 59.2
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 4.0e-75 285.4 257 58.8
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 5.2e-75 285.0 254 59.8
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 8.9e-75 284.3 267 58.4
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.2e-74 283.9 261 57.5
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 2.0e-74 283.1 258 58.5
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 4.4e-74 282.0 261 56.7
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 4.4e-74 282.0 261 56.3
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 4.4e-74 282.0 258 58.1
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 5.8e-74 281.6 274 55.1
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 5.8e-74 281.6 262 59.2
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 7.6e-74 281.2 249 60.6
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 1.3e-73 280.4 257 56.0
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 1.7e-73 280.0 256 57.4
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 3.8e-73 278.9 248 60.5
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 6.4e-73 278.1 265 57.0
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.1e-72 277.3 262 57.3
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.4e-72 276.9 262 57.6
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 2.4e-72 276.2 259 56.8
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 3.2e-72 275.8 263 55.9
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 4.2e-72 275.4 257 57.2
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 5.4e-72 275.0 254 58.3
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 9.3e-72 274.2 262 57.3
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.6e-71 273.5 267 55.8
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.6e-71 273.5 261 56.3
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 2.1e-71 273.1 271 54.2
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-71 272.7 249 59.4
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 3.5e-71 272.3 258 57.0
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 4.6e-71 271.9 267 54.7
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 7.8e-71 271.2 263 57.8
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 1.3e-70 270.4 247 59.9
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.3e-70 269.6 251 56.6
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 3.0e-70 269.2 260 55.4
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 8.7e-70 267.7 257 54.9
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.5e-69 266.9 254 55.5
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 1.9e-69 266.5 261 54.8
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 1.9e-69 266.5 271 52.0
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.9e-69 266.5 258 54.7
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 2.5e-69 266.2 254 55.5
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 1.6e-68 263.5 296 49.0
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 1.6e-68 263.5 269 52.4
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 2.1e-68 263.1 289 52.6
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 4.8e-68 261.9 249 55.8
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 6.2e-68 261.5 257 52.5
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 8.1e-68 261.2 259 54.1
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 1.1e-67 260.8 251 55.4
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 1.1e-67 260.8 251 55.4
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 1.1e-67 260.8 249 56.2
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 5.3e-67 258.5 261 54.0
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 5.3e-67 258.5 242 56.6
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 5.3e-67 258.5 261 53.6
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 1.2e-66 257.3 244 56.1
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 1.2e-66 257.3 250 55.2
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 1.5e-66 256.9 251 55.0
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 1.5e-66 256.9 268 51.5
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.5e-66 256.9 250 56.8
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 2.0e-66 256.5 249 54.6
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 2.0e-66 256.5 263 54.4
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 2.6e-66 256.1 243 56.0
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 3.4e-66 255.8 249 54.2
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 4.4e-66 255.4 249 54.2
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 7.6e-66 254.6 246 54.5
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 1.3e-65 253.8 270 50.4
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 2.9e-65 252.7 249 54.2
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 3.8e-65 252.3 249 53.8
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 4.9e-65 251.9 269 50.9
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 8.4e-65 251.1 262 52.3
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 7.4e-61 238.0 231 54.5
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 1.4e-59 233.8 239 53.1
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.5e-58 230.3 237 52.3
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 7.6e-58 228.0 237 51.1
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.4e-57 224.6 254 48.4
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 8.4e-57 224.6 254 48.4
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 2.3e-54 216.5 238 49.6
SalBow7G2694 Salvia bowleyana HOM05D002121 ORTHO05D008891 5.6e-53 211.8 193 58.5
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 2.1e-52 209.9 269 43.1
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 4.8e-52 208.8 248 47.6
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.1e-51 207.6 248 44.8
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 5.3e-51 205.3 240 46.7
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 8.4e-49 198.0 192 56.8
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 3.2e-48 196.1 172 60.5
GSVIVG01008832001 Vitis vinifera HOM05D002121 ORTHO05D008891 1.1e-45 187.6 186 53.8
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 1.4e-43 180.6 197 53.3
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 2.6e-42 176.4 186 53.8
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 1.0e-41 174.5 191 51.3
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 1.0e-41 174.5 185 50.8
BcaB03g12777 Brassica carinata HOM05D002121 ORTHO05D008891 6.1e-39 165.2 193 48.7
Oeu032210.1 Olea europaea HOM05D002121 ORTHO05D008891 5.1e-38 162.2 128 65.6
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 1.9e-37 160.2 118 66.1
ECA246G4340 Erigeron canadensis HOM05D002121 ORTHO05D008891 7.4e-37 158.3 170 51.8
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 2.8e-36 156.4 176 48.3
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 9.0e-35 151.4 247 39.3
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 3.9e-30 136.0 98 67.3
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 8.8e-30 134.8 281 33.1
Sc15g0002970 Simmondsia chinensis HOM05D002121 ORTHO05D008891 9.1e-27 124.8 126 54.0
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 1.2e-26 124.4 101 60.4
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 2.0e-26 123.6 313 30.7
Hma1.2p1_0612F.1_g188810 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 2.6e-18 96.7 57 82.5
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 1.0e-17 94.7 220 30.9
HanXRQChr15g0473481 Helianthus annuus HOM05D002121 ORTHO05D008891 1.2e-07 61.2 56 58.9


User provided reference genes

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