Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00321 Erythranthe guttata HOM05D004330 ORTHO05D005182 2.3e-154 548.9 280 100.0
Migut.G00904 Erythranthe guttata HOM05D004330 ORTHO05D005182 1.5e-153 546.2 280 99.3
Actinidia16901 Actinidia chinensis HOM05D004330 ORTHO05D005182 1.7e-141 506.1 280 90.7
MSTRG.22475 Avicennia marina HOM05D004330 ORTHO05D005182 3.7e-141 505.0 280 91.8
Actinidia29358 Actinidia chinensis HOM05D004330 ORTHO05D005182 8.3e-141 503.8 280 90.7
Dinv22060 Davidia involucrata HOM05D004330 ORTHO05D005182 1.3e-138 496.5 280 89.3
Gohir.D05G252400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 3.0e-138 495.4 280 88.2
Gorai.009G264800 Gossypium raimondii HOM05D004330 ORTHO05D005182 3.0e-138 495.4 280 88.2
SalBow6G1408 Salvia bowleyana HOM05D004330 ORTHO05D005182 3.9e-138 495.0 269 92.9
SalBow6G7193 Salvia bowleyana HOM05D004330 ORTHO05D005182 3.9e-138 495.0 269 92.9
Gohir.A05G251400 Gossypium hirsutum HOM05D004330 ORTHO05D005182 8.6e-138 493.8 280 87.9
MD15G1440000 Malus domestica HOM05D004330 ORTHO05D005182 1.1e-137 493.4 280 88.2
CANSAT01G1169 Cannabis sativa HOM05D004330 ORTHO05D005182 1.5e-137 493.0 280 87.1
Hma1.2p1_0016F.1_g011010 Hydrangea macrophylla HOM05D004330 ORTHO05D005182 1.5e-137 493.0 280 88.2
HanXRQChr05g0150611 Helianthus annuus HOM05D004330 ORTHO05D005182 4.3e-137 491.5 280 86.8
MD08G1244900 Malus domestica HOM05D004330 ORTHO05D005182 4.3e-137 491.5 280 87.9
GSVIVG01012102001 Vitis vinifera HOM05D004330 ORTHO05D005182 4.3e-137 491.5 280 87.1
Manes.15G103100 Manihot esculenta HOM05D004330 ORTHO05D005182 5.6e-137 491.1 280 88.2
Prupe.1G566400 Prunus persica HOM05D004330 ORTHO05D005182 5.6e-137 491.1 280 88.2
Eucgr.C04264 Eucalyptus grandis HOM05D004330 ORTHO05D005182 9.5e-137 490.3 280 88.2
Thecc.08G188100 Theobroma cacao HOM05D004330 ORTHO05D005182 1.2e-136 490.0 280 87.5
Rhsim01G0101300 Rhododendron simsii HOM05D004330 ORTHO05D005182 1.6e-136 489.6 280 87.1
FAN24G1765 Fragaria x ananassa HOM05D004330 ORTHO05D005182 4.7e-136 488.0 280 87.1
CSS0001083 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 6.2e-136 487.6 280 86.4
FvH4_2g00140 Fragaria vesca HOM05D004330 ORTHO05D005182 6.2e-136 487.6 280 86.8
CiPaw.04G008600 Carya illinoinensis HOM05D004330 ORTHO05D005182 8.1e-136 487.3 280 88.2
vmacro06107 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 8.1e-136 487.3 280 86.8
vmacro23409 Vaccinium macrocarpon HOM05D004330 ORTHO05D005182 8.1e-136 487.3 280 86.8
PSO210G1668 Papaver somniferum HOM05D004330 ORTHO05D005182 1.1e-135 486.9 280 87.5
RcHm_v2.0_Chr6g0249411 Rosa chinensis HOM05D004330 ORTHO05D005182 1.1e-135 486.9 280 86.8
arahy.Tifrunner.gnm1.ann1.7LJM3H Arachis hypogaea HOM05D004330 ORTHO05D005182 1.4e-135 486.5 280 87.9
arahy.Tifrunner.gnm1.ann1.A4ASB6 Arachis hypogaea HOM05D004330 ORTHO05D005182 1.4e-135 486.5 280 87.9
arahy.Tifrunner.gnm1.ann1.KU2W2N Arachis hypogaea HOM05D004330 ORTHO05D005182 1.4e-135 486.5 280 87.9
Lj5g0027584 Lotus japonicus HOM05D004330 ORTHO05D005182 1.8e-135 486.1 280 87.1
Nitab4.5_0007117g0020 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.8e-135 486.1 280 86.4
TAR628G0944 Trochodendron aralioides HOM05D004330 ORTHO05D005182 1.8e-135 486.1 280 86.4
Medtr1g079770 Medicago truncatula HOM05D004330 ORTHO05D005182 6.8e-135 484.2 280 87.1
PSO761G0081 Papaver somniferum HOM05D004330 ORTHO05D005182 6.8e-135 484.2 280 87.1
Cpa.g.sc249.10 Carica papaya HOM05D004330 ORTHO05D005182 8.9e-135 483.8 280 86.4
Nitab4.5_0000079g0120 Nicotiana tabacum HOM05D004330 ORTHO05D005182 2.6e-134 482.3 280 86.1
CAN.G473.93 Capsicum annuum HOM05D004330 ORTHO05D005182 3.4e-134 481.9 280 85.7
TPR.G10262 Trifolium pratense HOM05D004330 ORTHO05D005182 3.4e-134 481.9 280 86.8
Glyma.19G249400 Glycine max HOM05D004330 ORTHO05D005182 5.8e-134 481.1 280 86.4
Cfa008036 Carpinus fangiana HOM05D004330 ORTHO05D005182 9.9e-134 480.3 280 87.1
Nn6g32085 Nelumbo nucifera HOM05D004330 ORTHO05D005182 9.9e-134 480.3 280 85.0
Peaxi162Scf00078g01141 Petunia axillaris HOM05D004330 ORTHO05D005182 9.9e-134 480.3 281 85.4
FAN19G3045 Fragaria x ananassa HOM05D004330 ORTHO05D005182 2.2e-133 479.2 280 85.7
Lalb_Chr04g0261991 Lupinus albus HOM05D004330 ORTHO05D005182 2.2e-133 479.2 280 85.7
Solyc02g094090.4 Solanum lycopersicum HOM05D004330 ORTHO05D005182 2.2e-133 479.2 280 84.6
Ciclev10019077m.g Citrus clementina HOM05D004330 ORTHO05D005182 2.9e-133 478.8 280 85.7
Sopen02g038710 Solanum pennellii HOM05D004330 ORTHO05D005182 3.8e-133 478.4 280 84.6
Glyma.03G252000 Glycine max HOM05D004330 ORTHO05D005182 4.9e-133 478.0 280 85.7
VMungo0540G0979 Vigna mungo HOM05D004330 ORTHO05D005182 6.4e-133 477.6 280 86.1
DCAR_024855 Daucus carota HOM05D004330 ORTHO05D005182 8.4e-133 477.2 280 86.4
Phvul.006G106700 Phaseolus vulgaris HOM05D004330 ORTHO05D005182 8.4e-133 477.2 280 85.7
Potri.006G027100 Populus trichocarpa HOM05D004330 ORTHO05D005182 8.4e-133 477.2 280 86.1
CiPaw.03G012300 Carya illinoinensis HOM05D004330 ORTHO05D005182 1.1e-132 476.9 280 85.4
Sabra06G0020300 Salix brachista HOM05D004330 ORTHO05D005182 2.4e-132 475.7 280 85.7
Cc10_g16170 Coffea canephora HOM05D004330 ORTHO05D005182 3.2e-132 475.3 280 85.0
QL09p001201 Quercus lobata HOM05D004330 ORTHO05D005182 3.2e-132 475.3 279 85.7
Psat6g142240 Pisum sativum HOM05D004330 ORTHO05D005182 5.4e-132 474.6 280 85.4
Ca_09987_v3 Cicer arietinum L. HOM05D004330 ORTHO05D005182 7.1e-132 474.2 280 84.6
CSS0008451 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 1.6e-131 473.0 285 84.6
CsaV3_2G033380 Cucumis sativus L. HOM05D004330 ORTHO05D005182 2.7e-131 472.2 280 85.0
Sed0024292 Sechium edule HOM05D004330 ORTHO05D005182 2.7e-131 472.2 280 85.4
MELO3C008109.2 Cucumis melo HOM05D004330 ORTHO05D005182 4.6e-131 471.5 280 85.0
BcaC08g46563 Brassica carinata HOM05D004330 ORTHO05D005182 3.0e-130 468.8 280 83.2
C06p45370 Brassica napus HOM05D004330 ORTHO05D005182 3.0e-130 468.8 280 83.2
CDE03G0141 Ceratophyllum demersum HOM05D004330 ORTHO05D005182 3.0e-130 468.8 280 84.3
BraA07t31323Z Brassica rapa HOM05D004330 ORTHO05D005182 8.7e-130 467.2 280 83.2
Sp5g26470 Schrenkiella parvula HOM05D004330 ORTHO05D005182 1.1e-129 466.8 280 82.9
Aqoxy5G00868 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 1.5e-129 466.5 280 81.4
A07p37610 Brassica napus HOM05D004330 ORTHO05D005182 1.9e-129 466.1 280 82.9
BolC6t39595H Brassica oleracea HOM05D004330 ORTHO05D005182 1.9e-129 466.1 280 82.9
PGR031G1280 Punica granatum HOM05D004330 ORTHO05D005182 3.3e-129 465.3 280 83.6
BcaB03g14885 Brassica carinata HOM05D004330 ORTHO05D005182 7.3e-129 464.2 280 82.9
ATR0580G447 Amborella trichopoda HOM05D004330 ORTHO05D005182 9.6e-129 463.8 280 82.5
AL2G30885 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 1.6e-128 463.0 280 82.1
Haze_02242 Corylus avellana HOM05D004330 ORTHO05D005182 2.8e-128 462.2 279 84.9
TWI12G0377 Tripterygium wilfordii HOM05D004330 ORTHO05D005182 2.8e-128 462.2 306 77.5
AT1G71270 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 4.8e-128 461.5 280 82.1
AUR62011839 Chenopodium quinoa HOM05D004330 ORTHO05D005182 8.1e-128 460.7 280 82.5
AUR62024682 Chenopodium quinoa HOM05D004330 ORTHO05D005182 8.1e-128 460.7 280 82.5
THA.LOC104803377 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 8.1e-128 460.7 281 81.1
ECA246G0284 Erigeron canadensis HOM05D004330 ORTHO05D005182 1.1e-127 460.3 280 81.4
Carub.0002s1815 Capsella rubella HOM05D004330 ORTHO05D005182 1.8e-127 459.5 280 81.8
Sc17g0000550 Simmondsia chinensis HOM05D004330 ORTHO05D005182 5.3e-127 458.0 280 82.9
Lj7C415G17 Lonicera japonica HOM05D004330 ORTHO05D005182 6.9e-127 457.6 280 83.6
Os03g0417900 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 9.0e-127 457.2 280 80.7
unitig_37.g12692 Utricularia gibba HOM05D004330 ORTHO05D005182 1.2e-126 456.8 288 81.6
THA.LOC104823378 Tarenaya hassleriana HOM05D004330 ORTHO05D005182 3.4e-126 455.3 281 80.8
Ah.11g049400 Amaranthus hybridus HOM05D004330 ORTHO05D005182 9.9e-126 453.8 280 80.4
ClCG11G008260 Citrullus lanatus HOM05D004330 ORTHO05D005182 1.3e-125 453.4 282 83.0
EL10As5g23498 Beta vulgaris HOM05D004330 ORTHO05D005182 1.7e-125 453.0 281 81.5
CSS0031487 Camellia sinensis var. sinensis HOM05D004330 ORTHO05D005182 3.8e-125 451.8 271 82.7
Hund19537 Selenicereus undatus HOM05D004330 ORTHO05D005182 8.4e-125 450.7 280 79.6
Oeu020638.1 Olea europaea HOM05D004330 ORTHO05D005182 1.1e-124 450.3 255 89.0
Haze_02247 Corylus avellana HOM05D004330 ORTHO05D005182 6.0e-123 444.5 270 84.1
Thhalv10018205m.g Eutrema salsugineum HOM05D004330 ORTHO05D005182 3.0e-122 442.2 280 79.3
HPP92_006305 Vanilla planifolia HOM05D004330 ORTHO05D005182 6.6e-122 441.0 280 80.0
COL.COLO4_37491 Corchorus olitorius HOM05D004330 ORTHO05D005182 1.1e-121 440.3 262 83.2
Zm00001eb393130 Zea mays HOM05D004330 ORTHO05D005182 1.1e-121 440.3 280 77.5
Nitab4.5_0007150g0080 Nicotiana tabacum HOM05D004330 ORTHO05D005182 1.5e-121 439.9 280 80.4
Lsat_1_v5_gn_6_109860 Lactuca sativa HOM05D004330 ORTHO05D005182 3.3e-121 438.7 254 85.4
Nitab4.5_0002887g0010 Nicotiana tabacum HOM05D004330 ORTHO05D005182 3.3e-121 438.7 280 80.4
Carub.0002s1817 Capsella rubella HOM05D004330 ORTHO05D005182 7.3e-121 437.6 280 77.9
AT1G71300 Arabidopsis thaliana HOM05D004330 ORTHO05D005182 1.2e-118 430.3 305 70.2
Duzib177G1138 Durio zibethinus HOM05D004330 ORTHO05D005182 5.8e-118 427.9 280 79.6
AagrBONN_evm.TU.Sc2ySwM_228.5612 Anthoceros agrestis HOM05D004330 ORTHO05D005182 9.9e-118 427.2 283 74.2
AagrBONN_evm.TU.Sc2ySwM_228.5613 Anthoceros agrestis HOM05D004330 ORTHO05D005182 9.9e-118 427.2 283 74.2
SGA_v2.0_scaffold227G43197 Striga asiatica HOM05D004330 ORTHO05D005182 2.2e-117 426.0 254 86.2
Aqoxy2G00735 Aquilegia oxysepala HOM05D004330 ORTHO05D005182 2.1e-115 419.5 280 73.6
SMO304G0018 Selaginella moellendorffii HOM05D004330 ORTHO05D005182 3.3e-113 412.1 282 72.3
Mapoly0091s0001 Marchantia polymorpha HOM05D004330 ORTHO05D005182 1.6e-112 409.8 281 71.5
Aa31LG4G9240 Aethionema arabicum HOM05D004330 ORTHO05D005182 2.1e-112 409.5 313 69.0
COL.COLO4_00397 Corchorus olitorius HOM05D004330 ORTHO05D005182 4.9e-109 398.3 238 83.6
Pp3c4_27380 Physcomitrium patens HOM05D004330 ORTHO05D005182 1.9e-105 386.3 280 68.6
MBI16_g41537_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 4.3e-105 385.2 228 83.8
Os10g0488300 Oryza sativa ssp. japonica HOM05D004330 ORTHO05D005182 9.7e-89 330.9 280 61.4
AL2G30900 Arabidopsis lyrata HOM05D004330 ORTHO05D005182 2.8e-88 329.3 204 80.9
SHI24508 Sapria himalayana HOM05D004330 ORTHO05D005182 1.1e-87 327.4 252 67.9
Zm00001eb045280 Zea mays HOM05D004330 ORTHO05D005182 1.1e-84 317.4 280 55.7
SalBow1G7663 Salvia bowleyana HOM05D001091 ORTHO05D001020 6.7e-82 308.1 216 75.9
HPP92_006237 Vanilla planifolia HOM05D004330 ORTHO05D005182 5.3e-79 298.5 186 79.6
SEGI_21093 Sequoiadendron giganteum HOM05D004330 ORTHO05D005182 3.7e-72 275.8 158 85.4
Rhsim02G0174800 Rhododendron simsii HOM05D004330 ORTHO05D005182 2.7e-67 259.6 195 70.8
MCO11G104 Micromonas commoda HOM05D004330 ORTHO05D005182 1.5e-57 227.3 307 43.3
Oeu028617.1 Olea europaea HOM05D004330 ORTHO05D005182 5.7e-57 225.3 156 75.0
Actinidia09912 Actinidia chinensis HOM05D004330 ORTHO05D005182 6.3e-56 221.9 168 70.8
CBR_g54936 Chara braunii HOM05D000019 ORTHO05D000353 6.1e-51 205.3 133 71.4
HanXRQChr10g0312231 Helianthus annuus HOM05D004330 ORTHO05D005182 2.8e-43 179.9 105 84.8
Atru.chr13.2589 Acer truncatum HOM05D004330 ORTHO05D005182 1.7e-40 170.6 88 89.8
Cre08.g367200 Chlamydomonas reinhardtii HOM05D004330 ORTHO05D005182 2.0e-38 163.7 360 30.3
MBI16_g23303_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 2.2e-32 143.7 71 94.4
PRCOL_00005416 Prasinoderma coloniale HOM05D004330 ORTHO05D005182 4.9e-32 142.5 311 32.2
MBI13_g40628_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 8.9e-26 121.7 67 85.1
MBI13_g40627_MAGBIO Magnolia biondii HOM05D004330 ORTHO05D005182 2.2e-24 117.1 81 74.1
EL10Ac2g03252 Beta vulgaris HOM05D004330 ORTHO05D005182 1.9e-20 104.0 69 71.0
HPP92_006372 Vanilla planifolia HOM05D004330 ORTHO05D005182 2.6e-17 93.6 93 57.0
SGA_v2.0_scaffold123G33447 Striga asiatica HOM05D004330 ORTHO05D005182 7.1e-15 85.5 82 54.9
GSVIVG01018671001 Vitis vinifera HOM05D004330 ORTHO05D005182 1.4e-10 71.2 46 73.9
Cfa027264 Carpinus fangiana HOM05D004330 ORTHO05D005182 3.8e-08 63.2 176 25.0


User provided reference genes

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