Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00089 Erythranthe guttata HOM05D001023 ORTHO05D021472 3.7e-45 185.3 158 100.0
Migut.F00994 Erythranthe guttata HOM05D001023 ORTHO05D000912 7.5e-22 107.8 158 79.1
SalBow2G0210 Salvia bowleyana HOM05D001023 ORTHO05D000912 3.6e-16 89.0 139 46.8
SGA_v2.0_scaffold18G08459 Striga asiatica HOM05D001023 ORTHO05D000912 2.6e-14 82.8 132 46.2
SGA_v2.0_scaffold44G16844 Striga asiatica HOM05D001023 ORTHO05D000912 2.2e-13 79.7 129 47.3
MSTRG.8614 Avicennia marina HOM05D001023 ORTHO05D000912 2.9e-13 79.3 146 41.8
Migut.F00157 Erythranthe guttata HOM05D001023 ORTHO05D000912 3.7e-13 79.0 151 41.1
MSTRG.34 Avicennia marina HOM05D001023 ORTHO05D000912 8.3e-13 77.8 129 52.7
Migut.O00794 Erythranthe guttata HOM05D001023 ORTHO05D021472 8.3e-13 77.8 78 61.5
unitig_92.g28242 Utricularia gibba HOM05D001023 ORTHO05D000912 8.3e-13 77.8 128 43.0
Oeu023683.1 Olea europaea HOM05D001023 ORTHO05D000912 3.2e-12 75.9 130 42.3
SalBow6G2901 Salvia bowleyana HOM05D001023 ORTHO05D000912 4.6e-11 72.0 125 44.8
Oeu024195.1 Olea europaea HOM05D001023 ORTHO05D000912 6.0e-11 71.6 131 42.0
Oeu055382.2 Olea europaea HOM05D001023 ORTHO05D000912 7.8e-11 71.2 129 40.3
PGSC0003DMG400030226 Solanum tuberosum HOM05D001023 ORTHO05D000912 5.1e-10 68.6 133 38.3
Oeu039803.1 Olea europaea HOM05D001023 ORTHO05D000912 8.6e-10 67.8 128 40.6
CSS0000207 Camellia sinensis var. sinensis HOM05D001023 ORTHO05D000912 1.9e-09 66.6 138 38.4
CSS0001777 Camellia sinensis var. sinensis HOM05D001023 ORTHO05D000912 1.9e-09 66.6 138 38.4
Actinidia34262 Actinidia chinensis HOM05D001023 ORTHO05D000912 1.2e-08 63.9 126 35.7
Cc02_g00890 Coffea canephora HOM05D001023 ORTHO05D000912 2.1e-08 63.2 33 87.9
Hma1.2p1_0094F.1_g047300 Hydrangea macrophylla HOM05D001023 ORTHO05D000912 2.1e-08 63.2 31 93.5
Dinv29218 Davidia involucrata HOM05D005399 ORTHO05D006347 2.8e-08 62.8 68 52.9
Solyc03g082390.3 Solanum lycopersicum HOM05D001023 ORTHO05D000912 2.8e-08 62.8 32 87.5
Sopen03g022120 Solanum pennellii HOM05D001023 ORTHO05D000912 2.8e-08 62.8 32 87.5
CSS0014804 Camellia sinensis var. sinensis HOM05D001023 ORTHO05D000912 4.7e-08 62.0 31 90.3
Solyc06g053300.3 Solanum lycopersicum HOM05D001023 ORTHO05D000912 4.7e-08 62.0 135 40.0
Sopen06g018360 Solanum pennellii HOM05D001023 ORTHO05D000912 4.7e-08 62.0 135 40.0
Actinidia08691 Actinidia chinensis HOM05D001023 ORTHO05D000912 6.2e-08 61.6 123 38.2
Actinidia28279 Actinidia chinensis HOM05D001023 ORTHO05D000912 6.2e-08 61.6 123 37.4
Dinv35377 Davidia involucrata HOM05D001023 ORTHO05D000912 6.2e-08 61.6 68 54.4
Solyc03g082400.3 Solanum lycopersicum HOM05D001023 ORTHO05D000912 6.2e-08 61.6 67 52.2
Sopen03g022130 Solanum pennellii HOM05D001023 ORTHO05D000912 6.2e-08 61.6 67 52.2
Oeu037973.2 Olea europaea HOM05D001023 ORTHO05D000912 8.1e-08 61.2 128 38.3
PGSC0003DMG401003209 Solanum tuberosum HOM05D001023 ORTHO05D000912 8.1e-08 61.2 32 84.4
Lj1C1027G15 Lonicera japonica HOM05D001023 ORTHO05D000912 1.1e-07 60.8 31 87.1
Cfa016170 Carpinus fangiana HOM05D001023 ORTHO05D000912 1.4e-07 60.5 68 50.0
Nitab4.5_0002895g0030 Nicotiana tabacum HOM05D001023 ORTHO05D000912 1.4e-07 60.5 143 39.2
Ca_16770_v3 Cicer arietinum L. HOM05D001023 ORTHO05D000912 1.8e-07 60.1 36 77.8
Medtr3g092550 Medicago truncatula HOM05D001023 ORTHO05D000912 1.8e-07 60.1 36 77.8
Rhsim09G0209300 Rhododendron simsii HOM05D001023 ORTHO05D000912 1.8e-07 60.1 125 38.4
CAN.G1930.3 Capsicum annuum HOM05D001023 ORTHO05D000912 2.3e-07 59.7 131 36.6
DCAR_008978 Daucus carota HOM05D001023 ORTHO05D000912 2.3e-07 59.7 70 51.4
Psat5g072680 Pisum sativum HOM05D001023 ORTHO05D000912 2.3e-07 59.7 32 84.4
Haze_00284 Corylus avellana HOM05D001023 ORTHO05D000912 3.1e-07 59.3 68 50.0
DCAR_020366 Daucus carota HOM05D001023 ORTHO05D000912 3.1e-07 59.3 124 41.9
Peaxi162Scf00618g00017 Petunia axillaris HOM05D001023 ORTHO05D000912 4.0e-07 58.9 31 83.9
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 4.0e-07 58.9 123 40.7
arahy.Tifrunner.gnm1.ann1.863Y68 Arachis hypogaea HOM05D001023 ORTHO05D000912 5.2e-07 58.5 31 83.9
arahy.Tifrunner.gnm1.ann1.LLV436 Arachis hypogaea HOM05D001023 ORTHO05D000912 5.2e-07 58.5 31 83.9
CiPaw.06G041900 Carya illinoinensis HOM05D001023 ORTHO05D000912 5.2e-07 58.5 68 50.0
Ca_16768_v3 Cicer arietinum L. HOM05D001023 ORTHO05D000912 5.2e-07 58.5 31 83.9
Glyma.04G229400 Glycine max HOM05D001023 ORTHO05D000912 5.2e-07 58.5 31 83.9
Prupe.2G318100 Prunus persica HOM05D001023 ORTHO05D000912 5.2e-07 58.5 67 50.7
PGSC0003DMG402003209 Solanum tuberosum HOM05D001023 ORTHO05D000912 5.2e-07 58.5 67 50.7
vmacro06432 Vaccinium macrocarpon HOM05D001023 ORTHO05D000912 5.2e-07 58.5 130 33.8
MSTRG.13702 Avicennia marina HOM05D001023 ORTHO05D000912 6.8e-07 58.2 31 83.9
AUR62006013 Chenopodium quinoa HOM05D001023 ORTHO05D000912 6.8e-07 58.2 33 78.8
CiPaw.06G041700 Carya illinoinensis HOM05D001023 ORTHO05D000912 8.9e-07 57.8 68 48.5
ClCG07G017440 Citrullus lanatus HOM05D001023 ORTHO05D000912 8.9e-07 57.8 74 47.3
Lalb_Chr11g0067341 Lupinus albus HOM05D001023 ORTHO05D000912 8.9e-07 57.8 73 47.9
Medtr3g092510 Medicago truncatula HOM05D001023 ORTHO05D000912 8.9e-07 57.8 30 86.7
Psat5g072840 Pisum sativum HOM05D001023 ORTHO05D000912 8.9e-07 57.8 30 86.7
TPR.G28970 Trifolium pratense HOM05D001023 ORTHO05D000912 8.9e-07 57.8 30 86.7
EL10Ac3g05190 Beta vulgaris HOM05D001023 ORTHO05D000912 1.2e-06 57.4 31 80.6
Glyma.06G135200 Glycine max HOM05D001023 ORTHO05D000912 1.2e-06 57.4 31 80.6
PSO063G3832 Papaver somniferum HOM05D001023 ORTHO05D000912 1.2e-06 57.4 30 83.3
PSO478G3532 Papaver somniferum HOM05D001023 ORTHO05D000912 1.2e-06 57.4 30 83.3
PSO782G4539 Papaver somniferum HOM05D001023 ORTHO05D000912 1.2e-06 57.4 30 83.3
Actinidia18678 Actinidia chinensis HOM05D001023 ORTHO05D000912 1.5e-06 57.0 141 35.5
Lj3A897T89 Lonicera japonica HOM05D001023 ORTHO05D000912 1.5e-06 57.0 131 39.7
Lalb_Chr23g0271881 Lupinus albus HOM05D001023 ORTHO05D000912 1.5e-06 57.0 74 45.9
Hund21052 Selenicereus undatus HOM05D001023 ORTHO05D000912 1.5e-06 57.0 29 89.7
TAR374G0691 Trochodendron aralioides HOM05D001023 ORTHO05D000912 1.5e-06 57.0 30 83.3
TAR629G3089 Trochodendron aralioides HOM05D001023 ORTHO05D000912 1.5e-06 57.0 29 86.2
TAR636G0272 Trochodendron aralioides HOM05D001023 ORTHO05D000912 1.5e-06 57.0 29 86.2
MELO3C024854.2 Cucumis melo HOM05D001023 ORTHO05D000912 2.0e-06 56.6 31 80.6
CsaV3_4G008520 Cucumis sativus L. HOM05D001023 ORTHO05D000912 2.0e-06 56.6 31 80.6
Glyma.04G229500 Glycine max HOM05D001023 ORTHO05D000912 2.0e-06 56.6 30 83.3
Lalb_Chr11g0067351 Lupinus albus HOM05D001023 ORTHO05D000912 2.0e-06 56.6 69 47.8
Phvul.009G046100 Phaseolus vulgaris HOM05D001023 ORTHO05D000912 2.0e-06 56.6 30 83.3
Sed0010724 Sechium edule HOM05D001023 ORTHO05D000912 2.0e-06 56.6 30 83.3
Glyma.06G135300 Glycine max HOM05D001023 ORTHO05D000912 2.6e-06 56.2 131 35.1
Nitab4.5_0000115g0070 Nicotiana tabacum HOM05D001023 ORTHO05D000912 2.6e-06 56.2 143 37.8
HanXRQChr13g0418511 Helianthus annuus HOM05D001023 ORTHO05D000912 3.4e-06 55.8 30 80.0
Lsat_1_v5_gn_2_60681 Lactuca sativa HOM05D001023 ORTHO05D000912 3.4e-06 55.8 29 86.2
PSO782G2033 Papaver somniferum HOM05D001023 ORTHO05D000912 3.4e-06 55.8 30 80.0
MSTRG.2031 Avicennia marina HOM05D001023 ORTHO05D000912 4.4e-06 55.5 30 83.3
DCAR_014561 Daucus carota HOM05D001023 ORTHO05D000912 4.4e-06 55.5 140 35.0
Lsat_1_v5_gn_3_110901 Lactuca sativa HOM05D001023 ORTHO05D000912 4.4e-06 55.5 71 43.7
Sc13g0010220 Simmondsia chinensis HOM05D001023 ORTHO05D000912 4.4e-06 55.5 29 82.8
AT4G10610 Arabidopsis thaliana HOM05D001023 ORTHO05D000912 5.8e-06 55.1 34 70.6
arahy.Tifrunner.gnm1.ann1.03VLQB Arachis hypogaea HOM05D001023 ORTHO05D021472 5.8e-06 55.1 31 77.4
arahy.Tifrunner.gnm1.ann1.H0DRPA Arachis hypogaea HOM05D001023 ORTHO05D021472 5.8e-06 55.1 31 77.4
CAN.G303.10 Capsicum annuum HOM05D001023 ORTHO05D000912 5.8e-06 55.1 60 48.3
HanXRQChr03g0090151 Helianthus annuus HOM05D001023 ORTHO05D000912 5.8e-06 55.1 29 82.8
HanXRQChr14g0439811 Helianthus annuus HOM05D001023 ORTHO05D000912 5.8e-06 55.1 30 83.3
Nitab4.5_0000319g0140 Nicotiana tabacum HOM05D001023 ORTHO05D000912 5.8e-06 55.1 32 84.4
Nitab4.5_0006389g0030 Nicotiana tabacum HOM05D001023 ORTHO05D000912 5.8e-06 55.1 32 84.4
Peaxi162Scf00300g00849 Petunia axillaris HOM05D001023 ORTHO05D000912 5.8e-06 55.1 31 77.4
Sed0026199 Sechium edule HOM05D001023 ORTHO05D000912 5.8e-06 55.1 31 74.2
arahy.Tifrunner.gnm1.ann1.VP5HLN Arachis hypogaea HOM05D001023 ORTHO05D000912 7.6e-06 54.7 62 50.0
arahy.Tifrunner.gnm1.ann1.XW5FLG Arachis hypogaea HOM05D001023 ORTHO05D000912 7.6e-06 54.7 62 50.0
Lj3C897G5 Lonicera japonica HOM05D001023 ORTHO05D000912 7.6e-06 54.7 147 35.4
MD01G1227700 Malus domestica HOM05D001023 ORTHO05D000912 7.6e-06 54.7 67 49.3
ATR0078G017 Amborella trichopoda HOM05D001023 ORTHO05D000912 9.9e-06 54.3 29 79.3
Aqoxy5G04341 Aquilegia oxysepala HOM05D001023 ORTHO05D000912 9.9e-06 54.3 29 79.3
Thhalv10028784m.g Eutrema salsugineum HOM05D001023 ORTHO05D000912 9.9e-06 54.3 30 80.0
HanXRQChr05g0139321 Helianthus annuus HOM05D001023 ORTHO05D000912 9.9e-06 54.3 120 39.2
Phvul.009G046200 Phaseolus vulgaris HOM05D001023 ORTHO05D000912 9.9e-06 54.3 30 76.7
Sp6g06840 Schrenkiella parvula HOM05D001023 ORTHO05D000912 9.9e-06 54.3 30 80.0


User provided reference genes

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