Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001023', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001023' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001023' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001023' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001023' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001023', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001023' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001023' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001023' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001023' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001023', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001023' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001023' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001023' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001023' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001023', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001023' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001023', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '593', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false, 'has_blast_db' => true ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' ) ), 'genes' => array( 'A01p24780' => 'bna', 'A01p39260' => 'bna', 'A03p29040' => 'bna', 'A03p38850' => 'bna', 'A05p17990' => 'bna', 'A05p34920' => 'bna', 'A06p00890' => 'bna', 'A06p18330' => 'bna', 'A06p28190' => 'bna', 'A06p35280' => 'bna', 'A09p06490' => 'bna', 'A09p06500' => 'bna', 'A09p06510' => 'bna', 'A09p28620' => 'bna', 'A09p33520' => 'bna', 'Aa31LG10G1640' => 'aar', 'Aa31LG4G17940' => 'aar', 'Aa31LG6G7460' => 'aar', 'Aa31LG8G1720' => 'aar', 'Aa31LG9G11390' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.2530' => 'aag', 'Actinidia04193' => 'ach', 'Actinidia04593' => 'ach', 'Actinidia08691' => 'ach', 'Actinidia12839' => 'ach', 'Actinidia18678' => 'ach', 'Actinidia18844' => 'ach', 'Actinidia22216' => 'ach', 'Actinidia28279' => 'ach', 'Actinidia34262' => 'ach', 'Actinidia35178' => 'ach', 'Ah.04g163800' => 'amhyb', 'Ah.04g163810' => 'amhyb', 'Ah.06g195920' => 'amhyb', 'Ah.07g198220' => 'amhyb', 'Ah.12g053320' => 'amhyb', 'AL1G47100' => 'aly', 'AL1G62320' => 'aly', 'AL3G26830' => 'aly', 'AL5G29150' => 'aly', 'AL6G44680' => 'aly', 'Aqoxy1G01696' => 'aox', 'Aqoxy5G04341' => 'aox', 'arahy.Tifrunner.gnm1.ann1.03VLQB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6FDN0X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.863Y68' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8WSJ5E' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H0DRPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JL1WU7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LLV436' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VNW0TA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP5HLN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XW5FLG' => 'arhy', 'AT1G32790' => 'ath', 'AT1G53650' => 'ath', 'AT3G14450' => 'ath', 'AT3G49390' => 'ath', 'AT4G10610' => 'ath', 'AT5G24440' => 'ath', 'ATR0078G017' => 'atr', 'ATR0730G215' => 'atr', 'Atru.chr12.2404' => 'acertr', 'Atru.chr5.1196' => 'acertr', 'Atru.chr9.1858' => 'acertr', 'AUR62006013' => 'cqu', 'AUR62007074' => 'cqu', 'AUR62019938' => 'cqu', 'AUR62035613' => 'cqu', 'AUR62037952' => 'cqu', 'AUR62043090' => 'cqu', 'BcaB01g00714' => 'bca', 'BcaB01g01491' => 'bca', 'BcaB01g02744' => 'bca', 'BcaB02g09588' => 'bca', 'BcaB02g10897' => 'bca', 'BcaB04g18849' => 'bca', 'BcaB04g19823' => 'bca', 'BcaB05g23100' => 'bca', 'BcaB06g25380' => 'bca', 'BcaB07g33311' => 'bca', 'BcaC01g02406' => 'bca', 'BcaC01g03928' => 'bca', 'BcaC01g04670' => 'bca', 'BcaC02g08032' => 'bca', 'BcaC04g21050' => 'bca', 'BcaC04g23540' => 'bca', 'BcaC04g23541' => 'bca', 'BcaC04g23542' => 'bca', 'BcaC05g27310' => 'bca', 'BcaC05g28048' => 'bca', 'BcaC05g29071' => 'bca', 'BcaC07g39406' => 'bca', 'BcaC08g43546' => 'bca', 'BcaC08g44103' => 'bca', 'BcaC09g48415' => 'bca', 'BcaC09g49946' => 'bca', 'BcaNung01235' => 'bca', 'BcaNung02021' => 'bca', 'BolC1t03026H' => 'bol', 'BolC1t04959H' => 'bol', 'BolC3t15822H' => 'bol', 'BolC3t16969H' => 'bol', 'BolC3t18625H' => 'bol', 'BolC3t18816H' => 'bol', 'BolC4t27430H' => 'bol', 'BolC5t31963H' => 'bol', 'BolC5t32808H' => 'bol', 'BolC5t33960H' => 'bol', 'BolC6t36013H' => 'bol', 'BolC6t36694H' => 'bol', 'BolC7t44848H' => 'bol', 'BolC8t50059H' => 'bol', 'BolC9t53636H' => 'bol', 'BolC9t53637H' => 'bol', 'BraA01t03969Z' => 'bra', 'BraA03t13033Z' => 'bra', 'BraA05t20693Z' => 'bra', 'BraA05t22306Z' => 'bra', 'BraA06t23318Z' => 'bra', 'BraA06t24917Z' => 'bra', 'BraA06t25762Z' => 'bra', 'BraA06t26454Z' => 'bra', 'BraA09t36292Z' => 'bra', 'BraA09t36293Z' => 'bra', 'BraA09t36294Z' => 'bra', 'BraA09t38423Z' => 'bra', 'BraA09t38893Z' => 'bra', 'C01p30910' => 'bna', 'C01p50040' => 'bna', 'C03p35100' => 'bna', 'C03p47040' => 'bna', 'C03p65640' => 'bna', 'C04p59190' => 'bna', 'C05p32310' => 'bna', 'C05p52830' => 'bna', 'C06p09440' => 'bna', 'C06p15190' => 'bna', 'C07p43230' => 'bna', 'C08p24430' => 'bna', 'C09p07240' => 'bna', 'C09p07250' => 'bna', 'C09p07260' => 'bna', 'C09p07270' => 'bna', 'C09p36230' => 'bna', 'C09p58490' => 'bna', 'CAN.G1003.8' => 'can', 'CAN.G1930.3' => 'can', 'CAN.G262.1' => 'can', 'CAN.G303.10' => 'can', 'CAN.G303.9' => 'can', 'CAN.G580.10' => 'can', 'CAN.G904.19' => 'can', 'CANSAT21G1140' => 'cansat', 'CANSAT21G1774' => 'cansat', 'CANSAT56G1515' => 'cansat', 'CARHR032170' => 'chi', 'CARHR043940' => 'chi', 'CARHR089310' => 'chi', 'CARHR158360' => 'chi', 'CARHR255980' => 'chi', 'Carub.0001s3112' => 'cru', 'Carub.0001s4292' => 'cru', 'Carub.0003s1418' => 'cru', 'Carub.0005s1568' => 'cru', 'Carub.0006s2227' => 'cru', 'Carub.0006s2941' => 'cru', 'Ca_03486_v3' => 'car', 'Ca_16768_v3' => 'car', 'Ca_16770_v3' => 'car', 'Cc02_g00890' => 'ccan', 'Cc05_g10230' => 'ccan', 'CDE02G1390' => 'cde', 'CDE02G2733' => 'cde', 'CDE03G0457' => 'cde', 'CDE06G0379' => 'cde', 'CDE09G0750' => 'cde', 'CDE11G0185' => 'cde', 'CDE11G0788' => 'cde', 'Cfa011904' => 'cfa', 'Cfa016170' => 'cfa', 'Cfa019452' => 'cfa', 'Ciclev10020742m.g' => 'ccl', 'Ciclev10021336m.g' => 'ccl', 'Ciclev10023768m.g' => 'ccl', 'CiPaw.06G041700' => 'cil', 'CiPaw.06G041900' => 'cil', 'CiPaw.11G110600' => 'cil', 'CiPaw.12G046000' => 'cil', 'CiPaw.12G076200' => 'cil', 'ClCG07G010530' => 'cla', 'ClCG07G017440' => 'cla', 'COL.COLO4_10820' => 'col', 'COL.COLO4_14361' => 'col', 'COL.COLO4_17413' => 'col', 'Cpa.g.sc1615.2' => 'cpa', 'Cpa.g.sc3.149' => 'cpa', 'Cpa.g.sc37.91' => 'cpa', 'Cre10.g439700' => 'cre', 'CsaV3_4G007860' => 'csa', 'CsaV3_4G008520' => 'csa', 'CSS0000207' => 'camsi', 'CSS0001777' => 'camsi', 'CSS0011484' => 'camsi', 'CSS0014804' => 'camsi', 'CSS0028416' => 'camsi', 'DCAR_008978' => 'dca', 'DCAR_010576' => 'dca', 'DCAR_014561' => 'dca', 'DCAR_017565' => 'dca', 'DCAR_019637' => 'dca', 'DCAR_020364' => 'dca', 'DCAR_020365' => 'dca', 'DCAR_020366' => 'dca', 'DCAR_021058' => 'dca', 'DCAR_022247' => 'dca', 'DCAR_031553' => 'dca', 'Dinv13308' => 'din', 'Dinv26664' => 'din', 'Dinv35377' => 'din', 'Duzib068G0109' => 'dzi', 'Duzib068G1119' => 'dzi', 'Duzib084G0095' => 'dzi', 'Duzib084G0193' => 'dzi', 'Duzib187G0262' => 'dzi', 'Duzib205G0039' => 'dzi', 'Duzib213G0691' => 'dzi', 'Duzib268G1699' => 'dzi', 'ECA232G0760' => 'eca', 'ECA233G0573' => 'eca', 'ECA234G0342' => 'eca', 'ECA236G4998' => 'eca', 'ECA238G2237' => 'eca', 'ECA240G3572' => 'eca', 'EL10Ac3g05190' => 'bvu', 'EL10Ac4g08496' => 'bvu', 'EL10Ac5g12405' => 'bvu', 'Eucgr.A01414' => 'egr', 'Eucgr.E01065' => 'egr', 'Eucgr.F03200' => 'egr', 'Eucgr.K00426' => 'egr', 'FAN01G1264' => 'fan', 'FAN03G0383' => 'fan', 'FAN04G2353' => 'fan', 'FAN08G2139' => 'fan', 'FAN10G0213' => 'fan', 'FAN10G1132' => 'fan', 'FAN11G0486' => 'fan', 'FAN13G2966' => 'fan', 'FAN16G3350' => 'fan', 'FAN18G4140' => 'fan', 'FAN21G0920' => 'fan', 'FAN25G1465' => 'fan', 'FvH4_3g16680' => 'fve', 'FvH4_5g10630' => 'fve', 'FvH4_7g32841' => 'fve', 'Glyma.04G229400' => 'gma', 'Glyma.04G229500' => 'gma', 'Glyma.06G135200' => 'gma', 'Glyma.06G135300' => 'gma', 'Glyma.08G176400' => 'gma', 'Glyma.15G249900' => 'gma', 'Gohir.1Z049829' => 'ghi', 'Gohir.A01G041600' => 'ghi', 'Gohir.A04G047000' => 'ghi', 'Gohir.A08G104300' => 'ghi', 'Gohir.A08G109400' => 'ghi', 'Gohir.A11G016300' => 'ghi', 'Gohir.A11G018100' => 'ghi', 'Gohir.A11G018200' => 'ghi', 'Gohir.A11G018600' => 'ghi', 'Gohir.A11G224220' => 'ghi', 'Gohir.A11G291200' => 'ghi', 'Gohir.D01G029200' => 'ghi', 'Gohir.D04G000045' => 'ghi', 'Gohir.D04G000070' => 'ghi', 'Gohir.D05G333200' => 'ghi', 'Gohir.D08G115900' => 'ghi', 'Gohir.D08G122200' => 'ghi', 'Gohir.D10G109000' => 'ghi', 'Gohir.D11G016100' => 'ghi', 'Gohir.D11G017900' => 'ghi', 'Gohir.D11G018000' => 'ghi', 'Gohir.D11G018300' => 'ghi', 'Gohir.D11G301400' => 'ghi', 'Gohir.D13G056650' => 'ghi', 'Gorai.002G038400' => 'gra', 'Gorai.004G124800' => 'gra', 'Gorai.004G128900' => 'gra', 'Gorai.007G016900' => 'gra', 'Gorai.007G019000' => 'gra', 'Gorai.007G019500' => 'gra', 'Gorai.007G335300' => 'gra', 'Gorai.009G358300' => 'gra', 'Gorai.011G119400' => 'gra', 'Gorai.012G000600' => 'gra', 'Gorai.013G064600' => 'gra', 'Gorai.013G103900' => 'gra', 'Gorai.N024200' => 'gra', 'GSVIVG01001961001' => 'vvi', 'GSVIVG01019674001' => 'vvi', 'GSVIVG01038633001' => 'vvi', 'HanXRQChr03g0072451' => 'han', 'HanXRQChr03g0090151' => 'han', 'HanXRQChr04g0115061' => 'han', 'HanXRQChr05g0139321' => 'han', 'HanXRQChr10g0305961' => 'han', 'HanXRQChr11g0330381' => 'han', 'HanXRQChr12g0374371' => 'han', 'HanXRQChr12g0382101' => 'han', 'HanXRQChr13g0418511' => 'han', 'HanXRQChr14g0439811' => 'han', 'HanXRQChr15g0492281' => 'han', 'Haze_00284' => 'cav', 'Haze_08495' => 'cav', 'Haze_09195' => 'cav', 'Hma1.2p1_0094F.1_g047300' => 'hma', 'Hma1.2p1_0325F.1_g125980' => 'hma', 'Hma1.2p1_1456F.1_g284570' => 'hma', 'HPP92_000587' => 'vpl', 'HPP92_006253' => 'vpl', 'HPP92_008220' => 'vpl', 'HPP92_020980' => 'vpl', 'HPP92_023178' => 'vpl', 'HPP92_023179' => 'vpl', 'Hund02311' => 'sun', 'Hund14443' => 'sun', 'Hund20294' => 'sun', 'Hund21052' => 'sun', 'Hund22790' => 'sun', 'Lalb_Chr01g0006971' => 'lal', 'Lalb_Chr01g0016071' => 'lal', 'Lalb_Chr03g0031461' => 'lal', 'Lalb_Chr03g0031771' => 'lal', 'Lalb_Chr08g0239731' => 'lal', 'Lalb_Chr08g0239741' => 'lal', 'Lalb_Chr11g0067341' => 'lal', 'Lalb_Chr11g0067351' => 'lal', 'Lalb_Chr19g0133581' => 'lal', 'Lalb_Chr23g0271881' => 'lal', 'Lalb_Chr23g0271891' => 'lal', 'Lalb_Chr25g0285371' => 'lal', 'Lj1A809G31' => 'lonja', 'Lj1C1027G15' => 'lonja', 'Lj1g0000227' => 'lja', 'Lj1g0000769' => 'lja', 'Lj1g0013475' => 'lja', 'Lj3A897T89' => 'lonja', 'Lj3C897G5' => 'lonja', 'Lj3g0001281' => 'lja', 'Lj3g0001297' => 'lja', 'Lj8A141G33' => 'lonja', 'Lsat_1_v5_gn_2_60681' => 'lsa', 'Lsat_1_v5_gn_3_110901' => 'lsa', 'Lsat_1_v5_gn_5_119861' => 'lsa', 'Lsat_1_v5_gn_5_67100' => 'lsa', 'Lsat_1_v5_gn_7_101481' => 'lsa', 'Lsat_1_v5_gn_9_50120' => 'lsa', 'Manes.01G042400' => 'mes', 'Manes.01G042600' => 'mes', 'Manes.01G055500' => 'mes', 'Manes.01G090600' => 'mes', 'Manes.02G001350' => 'mes', 'Manes.15G102100' => 'mes', 'Mapoly0011s0129' => 'mpo', 'MBI07_g23438_MAGBIO' => 'mbi', 'MBI10_g30425_MAGBIO' => 'mbi', 'MCO09G715' => 'mco', 'MCO16G037' => 'mco', 'MD01G1227700' => 'mdo', 'MD05G1208300' => 'mdo', 'MD06G1121700' => 'mdo', 'MD07G1298200' => 'mdo', 'MD10G1194800' => 'mdo', 'MD14G1138200' => 'mdo', 'Medtr2g070540' => 'mtr', 'Medtr3g092510' => 'mtr', 'Medtr3g092550' => 'mtr', 'MELO3C016159.2' => 'cme', 'MELO3C024854.2' => 'cme', 'Migut.C00089' => 'egut', 'Migut.E00728' => 'egut', 'Migut.F00157' => 'egut', 'Migut.F00994' => 'egut', 'Migut.H02073' => 'egut', 'Migut.M00654' => 'egut', 'Migut.O00794' => 'egut', 'MSTRG.13702' => 'ama', 'MSTRG.14274' => 'ama', 'MSTRG.15007' => 'ama', 'MSTRG.2031' => 'ama', 'MSTRG.34' => 'ama', 'MSTRG.8614' => 'ama', 'Nitab4.5_0000115g0070' => 'nta', 'Nitab4.5_0000319g0140' => 'nta', 'Nitab4.5_0000319g0200' => 'nta', 'Nitab4.5_0000505g0140' => 'nta', 'Nitab4.5_0000639g0210' => 'nta', 'Nitab4.5_0000923g0060' => 'nta', 'Nitab4.5_0001924g0020' => 'nta', 'Nitab4.5_0002209g0160' => 'nta', 'Nitab4.5_0002895g0030' => 'nta', 'Nitab4.5_0004309g0010' => 'nta', 'Nitab4.5_0005080g0030' => 'nta', 'Nitab4.5_0006389g0030' => 'nta', 'Nn1g00430' => 'nnu', 'Nn1g03811' => 'nnu', 'Nn3g18863' => 'nnu', 'Nn3g20793' => 'nnu', 'Nn4g26564' => 'nnu', 'Oeu009887.2' => 'oeu', 'Oeu023683.1' => 'oeu', 'Oeu024195.1' => 'oeu', 'Oeu034974.1' => 'oeu', 'Oeu035496.1' => 'oeu', 'Oeu037973.2' => 'oeu', 'Oeu039803.1' => 'oeu', 'Oeu046394.1' => 'oeu', 'Oeu046395.1' => 'oeu', 'Oeu055382.2' => 'oeu', 'Os01g0209400' => 'osa', 'Os02g0244600' => 'osa', 'Os06g0542100' => 'osa', 'Os08g0116400' => 'osa', 'Os09g0314500' => 'osa', 'Peaxi162Scf00000g05836' => 'pax', 'Peaxi162Scf00074g00146' => 'pax', 'Peaxi162Scf00111g00821' => 'pax', 'Peaxi162Scf00300g00849' => 'pax', 'Peaxi162Scf00542g00619' => 'pax', 'Peaxi162Scf00618g00017' => 'pax', 'PGR031G3040' => 'pgr', 'PGR042G2208' => 'pgr', 'PGR042G3776' => 'pgr', 'PGR142G2198' => 'pgr', 'PGSC0003DMG400007842' => 'stu', 'PGSC0003DMG400008767' => 'stu', 'PGSC0003DMG400021249' => 'stu', 'PGSC0003DMG400027650' => 'stu', 'PGSC0003DMG400030226' => 'stu', 'PGSC0003DMG401003209' => 'stu', 'PGSC0003DMG402003209' => 'stu', 'Phvul.005G051500' => 'pvu', 'Phvul.009G046100' => 'pvu', 'Phvul.009G046200' => 'pvu', 'Potri.001G377500' => 'ptr', 'Potri.001G448800' => 'ptr', 'Potri.011G095800' => 'ptr', 'Potri.011G152700' => 'ptr', 'Potri.012G022000' => 'ptr', 'Potri.015G005400' => 'ptr', 'Pp3c24_9420' => 'ppa', 'Pp3c8_13170' => 'ppa', 'Prupe.2G318100' => 'ppe', 'Prupe.4G149200' => 'ppe', 'Prupe.5G132400' => 'ppe', 'Psat1g001960' => 'psa', 'Psat5g072680' => 'psa', 'Psat5g072840' => 'psa', 'PSO063G3832' => 'pso', 'PSO135G0418' => 'pso', 'PSO384G3787' => 'pso', 'PSO478G3532' => 'pso', 'PSO782G2033' => 'pso', 'PSO782G4539' => 'pso', 'QL02p027507' => 'qlo', 'QL04p070520' => 'qlo', 'RcHm_v2.0_Chr1g0352911' => 'rch', 'RcHm_v2.0_Chr1g0382781' => 'rch', 'RcHm_v2.0_Chr5g0027791' => 'rch', 'RcHm_v2.0_Chr6g0246511' => 'rch', 'RcHm_v2.0_Chr7g0187511' => 'rch', 'Rhsim03G0214600' => 'rsi', 'Rhsim06G0184600' => 'rsi', 'Rhsim09G0209300' => 'rsi', 'RhsimUnG0204200' => 'rsi', 'Sabra05G0139900' => 'sbr', 'Sabra11G0089800' => 'sbr', 'Sabra11G0092700' => 'sbr', 'Sabra11G0147300' => 'sbr', 'Sabra11G0148000' => 'sbr', 'Sabra12G0011700' => 'sbr', 'Sabra15G0003800' => 'sbr', 'Sabra16G0248700' => 'sbr', 'Sabra16G0302900' => 'sbr', 'SalBow2G0210' => 'sbo', 'SalBow6G2901' => 'sbo', 'SalBow7G2970' => 'sbo', 'Sc03g0007750' => 'sci', 'Sc13g0010220' => 'sci', 'Sc19g0000630' => 'sci', 'Sc25g0001040' => 'sci', 'Sed0005375' => 'sed', 'Sed0005921' => 'sed', 'Sed0010724' => 'sed', 'Sed0026199' => 'sed', 'SEGI_27760' => 'sgi', 'SEGI_38352' => 'sgi', 'SGA_v2.0_scaffold104G30249' => 'sas', 'SGA_v2.0_scaffold130G34237' => 'sas', 'SGA_v2.0_scaffold141G35551' => 'sas', 'SGA_v2.0_scaffold181G39781' => 'sas', 'SGA_v2.0_scaffold18G08459' => 'sas', 'SGA_v2.0_scaffold201G41390' => 'sas', 'SGA_v2.0_scaffold44G16844' => 'sas', 'SGA_v2.0_scaffold4G02135' => 'sas', 'SGA_v2.0_scaffold73G24353' => 'sas', 'SHI02293' => 'shi', 'SMO119G0304' => 'smo', 'SMO163G0054' => 'smo', 'Solyc03g082390.3' => 'sly', 'Solyc03g082400.3' => 'sly', 'Solyc04g039700.1' => 'sly', 'Solyc06g053300.3' => 'sly', 'Solyc07g056590.3' => 'sly', 'Solyc10g007590.4' => 'sly', 'Solyc12g011340.2' => 'sly', 'Sopen03g022120' => 'spe', 'Sopen03g022130' => 'spe', 'Sopen06g018360' => 'spe', 'Sopen07g029940' => 'spe', 'Sopen10g003510' => 'spe', 'Sopen12g006670' => 'spe', 'Sp1g28170' => 'spa', 'Sp1g40190' => 'spa', 'Sp2g22890' => 'spa', 'Sp3g12760' => 'spa', 'Sp5g12680' => 'spa', 'Sp6g06840' => 'spa', 'TAR374G0691' => 'tar', 'TAR375G0968' => 'tar', 'TAR451G0002' => 'tar', 'TAR627G0222' => 'tar', 'TAR629G0343' => 'tar', 'TAR629G3089' => 'tar', 'TAR636G0272' => 'tar', 'THA.LOC104803339' => 'tha', 'THA.LOC104806456' => 'tha', 'THA.LOC104810411' => 'tha', 'THA.LOC104813062' => 'tha', 'THA.LOC104814948' => 'tha', 'THA.LOC104815340' => 'tha', 'THA.LOC104815585' => 'tha', 'THA.LOC104822602' => 'tha', 'Thecc.03G207600' => 'tca', 'Thecc.03G218400' => 'tca', 'Thecc.07G146900' => 'tca', 'Thhalv10008028m.g' => 'esa', 'Thhalv10010470m.g' => 'esa', 'Thhalv10012369m.g' => 'esa', 'Thhalv10021108m.g' => 'esa', 'Thhalv10028784m.g' => 'esa', 'TPR.G11112' => 'tpr', 'TPR.G15454' => 'tpr', 'TPR.G26647' => 'tpr', 'TPR.G28315' => 'tpr', 'TPR.G28970' => 'tpr', 'TPR.G3895' => 'tpr', 'TWI15G1139' => 'twi', 'TWI23G1214' => 'twi', 'TWI38G1104' => 'twi', 'TWI39G0639' => 'twi', 'TWI81G0940' => 'twi', 'unitig_0.g2016' => 'ugi', 'unitig_0.g2629' => 'ugi', 'unitig_748.g7279' => 'ugi', 'unitig_92.g28242' => 'ugi', 'vmacro06432' => 'vma', 'vmacro09433' => 'vma', 'vmacro12017' => 'vma', 'VMungo0201G0001' => 'vmu', 'VMungo1080G0764' => 'vmu', 'VMungo1309G0468' => 'vmu', 'VMungo1309G1740' => 'vmu', 'Zm00001eb027400' => 'zma', 'Zm00001eb027410' => 'zma', 'Zm00001eb120320' => 'zma', 'Zm00001eb126460' => 'zma', 'Zm00001eb173820' => 'zma', 'Zm00001eb182700' => 'zma', 'Zm00001eb204590' => 'zma', 'Zm00001eb236660' => 'zma', 'Zm00001eb260870' => 'zma', 'Zm00001eb272870' => 'zma', 'Zm00001eb281070' => 'zma', 'Zm00001eb306990' => 'zma', 'Zm00001eb309650' => 'zma', 'Zm00001eb338310' => 'zma', 'Zm00001eb368650' => 'zma', 'Zm00001eb383540' => 'zma', 'Zm00001eb383650' => 'zma', 'Zm00001eb408160' => 'zma', 'Zm00001eb422460' => 'zma', 'Zm00001eb431630' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001023' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001023' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001023' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001023' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151