Gene: Solyc06g053300.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g053300.3
- Transcript Identifier Solyc06g053300.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 33813590-33819307 : negative
Gene Family Information
- ID HOM05D001023
- #Genes/#Species 593/98
- Phylogenetic origin
- ID ORTHO05D000912
- #Genes/#Species 558/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g053300.3.1
- uniprot A0A3Q7GW83
- gene_id Solyc06g053300
Descriptions
- Description Polyadenylate-binding protein (AHRD V3.3 *** A0A2K3NXT2_TRIPR)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G49390 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR034825 | CID8-like protein, RNA recognition motif 2 |
| IPR009818 | Ataxin-2, C-terminal |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR034823 | CID8-like protein, RNA recognition motif 1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |