Gene: Sopen03g022130

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g022130
  • Transcript Identifier Sopen03g022130.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 53717748-53723548 : positive

Gene Family Information

  • ID HOM05D001023
  • #Genes/#Species 593/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g022130.1

Descriptions

  • Description RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins. | CTC-interacting domain 11 (CID11) | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , Ataxin-2, C-terminal | BEST Arabidopsis thaliana protein match is: CTC-interacting domain 12
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G53650
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT4G10610
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G49390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034825 CID8-like protein, RNA recognition motif 2
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR034823 CID8-like protein, RNA recognition motif 1
IPR035979 RNA-binding domain superfamily
IPR009818 Ataxin-2, C-terminal
Mapman id Description
35.1 not assigned.annotated