Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 0.0e+00 1169.5 598 100.0
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 1.8e-225 786.2 656 64.6
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 5.8e-224 781.2 612 65.7
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 1.4e-214 750.0 697 59.8
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 7.1e-198 694.5 685 56.6
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 2.1e-194 682.9 652 57.4
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 6.9e-193 677.9 662 56.9
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 4.9e-191 671.8 668 55.8
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 1.1e-190 670.6 666 56.8
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 2.5e-190 669.5 665 57.1
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 1.6e-189 666.8 657 55.4
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 3.0e-188 662.5 637 57.0
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 3.3e-187 659.1 659 55.1
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 4.2e-182 642.1 665 54.1
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 1.5e-179 633.6 664 52.9
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 1.9e-179 633.3 763 49.0
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.6e-178 630.2 662 53.9
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 1.9e-174 616.7 700 51.3
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 9.4e-174 614.4 709 51.2
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 7.9e-173 611.3 657 53.9
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 7.9e-173 611.3 622 53.2
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 1.0e-172 610.9 650 52.3
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 7.4e-171 604.7 707 48.9
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 2.2e-170 603.2 698 49.7
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 6.3e-170 601.7 706 48.6
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 6.9e-169 598.2 669 51.3
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 1.2e-168 597.4 705 48.2
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 2.6e-168 596.3 699 49.5
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 2.6e-168 596.3 622 53.4
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 3.4e-168 595.9 665 50.8
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 5.9e-168 595.1 669 51.0
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 7.7e-168 594.7 710 48.6
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 1.7e-167 593.6 706 48.4
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 5.0e-167 592.0 720 47.5
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 6.5e-167 591.7 713 47.8
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 8.5e-167 591.3 709 48.2
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 1.4e-166 590.5 668 50.1
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 1.2e-165 587.4 644 52.8
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 3.6e-165 585.9 634 51.9
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 4.7e-165 585.5 727 46.9
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 2.0e-163 580.1 730 47.5
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 1.3e-162 577.4 706 47.6
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 4.8e-162 575.5 696 49.0
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 4.8e-162 575.5 634 51.3
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 4.1e-161 572.4 684 48.8
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 7.0e-161 571.6 718 46.9
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.6e-160 569.7 517 58.0
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 1.0e-159 567.8 647 51.2
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 2.9e-159 566.2 709 46.8
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 6.5e-159 565.1 606 51.7
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 8.5e-159 564.7 713 48.0
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 2.5e-158 563.1 752 45.3
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 3.2e-158 562.8 665 48.3
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.0e-156 557.8 626 49.5
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 5.2e-156 555.4 601 52.1
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 2.6e-155 553.1 758 45.4
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 4.4e-155 552.4 703 47.5
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 1.8e-153 547.0 787 43.1
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 1.8e-153 547.0 636 50.5
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 4.1e-153 545.8 570 55.6
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 5.3e-153 545.4 700 45.6
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 9.1e-153 544.7 700 47.1
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 4.5e-152 542.3 660 47.6
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 2.9e-151 539.7 723 45.2
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 1.9e-150 537.0 721 45.5
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.9e-150 537.0 603 50.2
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 9.4e-150 534.6 660 48.2
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 9.4e-150 534.6 663 47.7
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 4.7e-149 532.3 663 47.4
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.4e-148 530.8 709 45.8
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 5.2e-148 528.9 727 44.8
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 9.8e-147 524.6 660 45.8
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 4.1e-145 519.2 710 46.8
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 4.5e-144 515.8 698 47.1
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 2.5e-142 510.0 696 45.7
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 5.5e-142 508.8 696 45.5
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 1.0e-140 504.6 728 42.3
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 1.4e-140 504.2 702 45.4
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 5.2e-140 502.3 732 43.0
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.7e-138 497.3 696 45.3
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 1.1e-137 494.6 594 49.8
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 3.1e-137 493.0 674 45.1
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.6e-136 490.7 640 47.2
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 4.5e-136 489.2 734 41.3
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 6.6e-135 485.3 649 45.5
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 2.5e-134 483.4 712 41.7
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 7.3e-134 481.9 755 41.2
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 2.1e-133 480.3 729 40.6
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 6.8e-132 475.3 595 45.7
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 7.0e-129 465.3 600 48.2
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 4.6e-128 462.6 752 40.8
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 1.9e-126 457.2 856 37.1
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 2.3e-124 450.3 659 42.6
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 6.0e-120 435.6 674 42.9
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 6.2e-117 425.6 819 35.2
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 2.3e-116 423.7 822 35.2
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 1.1e-113 414.8 836 35.3
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 1.4e-113 414.5 836 35.2
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 9.2e-113 411.8 680 41.2
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 3.0e-103 380.2 721 36.9
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 1.9e-102 377.5 462 48.9
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 9.6e-102 375.2 488 45.9
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.1e-101 374.0 816 33.7
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.7e-90 337.8 598 38.5
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 9.3e-89 332.0 606 38.6
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 4.6e-88 329.7 621 37.7
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 3.3e-86 323.6 650 35.4
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 8.2e-77 292.4 604 36.6
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 3.8e-74 283.5 323 52.0
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 4.9e-74 283.1 613 32.3
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 7.9e-72 275.8 623 33.9
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.1e-70 271.9 353 45.0
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 7.4e-70 269.2 721 29.4
Hma1.2p1_1553F.1_g290340 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 2.4e-68 264.2 579 37.3
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 3.0e-63 247.3 277 49.5
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 7.4e-62 242.7 195 63.1
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 4.6e-56 223.4 883 26.0
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 3.0e-55 220.7 416 37.0
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 3.3e-54 217.2 661 27.8
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 2.5e-41 174.5 176 50.0
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 2.5e-41 174.5 176 50.0
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 5.5e-41 173.3 126 69.0
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 4.0e-39 167.2 392 30.4
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 4.8e-37 160.2 180 47.2
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 4.0e-31 140.6 130 57.7
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.2e-27 129.0 82 75.6
Nitab4.5_0000185g0350 Nicotiana tabacum HOM05D005824 ORTHO05D007029 6.8e-23 113.2 103 56.3
CANSAT54G0922 Cannabis sativa HOM05D005824 ORTHO05D007029 3.5e-19 100.9 156 41.7
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.9e-17 95.1 127 41.7
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 1.8e-15 88.6 113 42.5
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 3.0e-15 87.8 95 45.3
AUR62009842 Chenopodium quinoa HOM05D003327 ORTHO05D004535 1.9e-09 68.6 202 33.7
MCO03G572 Micromonas commoda HOM05D005824 ORTHO05D007029 9.8e-06 56.2 603 22.1


User provided reference genes

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