Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 0.0e+00 2181.4 1082 100.0
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 0.0e+00 1993.8 1097 90.2
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 0.0e+00 1946.8 1111 87.4
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 0.0e+00 1843.2 1133 80.8
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 0.0e+00 1837.4 1104 83.0
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 0.0e+00 1829.7 1094 83.5
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1780.8 1084 82.3
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1703.7 1051 79.3
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 0.0e+00 1697.2 1081 77.4
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 0.0e+00 1602.0 1086 73.6
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 0.0e+00 1592.0 1105 72.6
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 0.0e+00 1582.0 1096 72.1
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 0.0e+00 1570.8 1090 71.6
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1545.8 1086 71.6
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 0.0e+00 1541.9 1086 71.5
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 0.0e+00 1530.4 1091 70.3
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 0.0e+00 1528.1 1089 69.3
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 0.0e+00 1525.4 1090 70.4
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1523.1 1090 69.9
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 0.0e+00 1521.9 1092 70.4
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 0.0e+00 1520.8 1096 69.8
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 0.0e+00 1510.4 1115 68.4
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1505.3 1090 69.2
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 0.0e+00 1505.3 1086 69.2
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 0.0e+00 1498.0 1089 68.8
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1491.1 1076 69.9
Gorai.006G094800 Gossypium raimondii HOM05D001849 ORTHO05D004689 0.0e+00 1488.8 1116 68.0
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 0.0e+00 1482.2 1089 68.9
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 0.0e+00 1481.1 1090 68.2
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 0.0e+00 1479.9 1082 68.9
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1472.6 1090 68.5
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 0.0e+00 1456.4 1093 67.4
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 0.0e+00 1455.3 871 82.4
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 0.0e+00 1445.6 1083 67.0
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 0.0e+00 1442.9 998 71.9
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 0.0e+00 1441.8 1086 66.9
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 0.0e+00 1441.4 1144 64.6
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 0.0e+00 1441.4 1084 67.3
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 0.0e+00 1439.9 1086 66.7
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1436.8 1074 67.8
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 0.0e+00 1436.4 1088 66.5
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 0.0e+00 1432.9 1123 64.6
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 0.0e+00 1429.5 1083 66.0
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1426.8 1131 64.8
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1426.4 1087 66.7
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1426.0 1087 66.7
Haze_16076 Corylus avellana HOM05D001849 ORTHO05D004689 0.0e+00 1423.3 1188 63.5
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 0.0e+00 1422.9 1089 65.8
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1422.5 1091 66.3
CSS0020628 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1421.8 1097 66.5
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1421.0 1097 65.6
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 0.0e+00 1413.7 1099 65.3
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 0.0e+00 1410.6 1089 65.7
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 0.0e+00 1410.2 1086 66.1
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1408.7 1088 66.2
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 0.0e+00 1404.4 1091 65.1
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 0.0e+00 1402.1 1125 64.4
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 0.0e+00 1400.2 1048 67.0
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 0.0e+00 1390.2 1079 64.0
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 0.0e+00 1384.8 1020 67.5
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 0.0e+00 1378.2 1090 65.0
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 0.0e+00 1366.7 1118 62.3
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 0.0e+00 1365.1 1091 63.1
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 0.0e+00 1357.8 1084 64.6
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 0.0e+00 1356.7 1083 63.3
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 0.0e+00 1355.9 1083 64.6
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 0.0e+00 1352.0 1177 60.4
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 0.0e+00 1351.3 1073 64.9
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1344.3 1089 62.9
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 0.0e+00 1341.6 1089 63.5
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 0.0e+00 1334.7 1208 57.7
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1332.0 1096 62.3
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 0.0e+00 1323.5 869 74.1
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 0.0e+00 1321.2 1101 62.5
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 0.0e+00 1316.2 874 73.6
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 0.0e+00 1310.0 1075 62.9
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 0.0e+00 1303.1 1098 61.3
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 0.0e+00 1296.2 1088 61.9
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 0.0e+00 1282.7 1090 61.0
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 0.0e+00 1277.3 872 71.8
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 0.0e+00 1271.1 1087 59.7
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 0.0e+00 1270.8 870 70.8
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 0.0e+00 1244.2 849 71.7
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 0.0e+00 1242.3 822 74.0
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 0.0e+00 1239.2 857 70.1
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 0.0e+00 1223.8 1089 58.7
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 0.0e+00 1199.5 873 68.5
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 0.0e+00 1199.1 1210 54.1
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 0.0e+00 1198.0 1086 57.7
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 0.0e+00 1196.8 933 65.0
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1196.0 1051 60.4
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 0.0e+00 1183.7 828 69.8
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1174.8 1009 61.4
CSS0003623 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 0.0e+00 1167.1 1018 61.1
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 0.0e+00 1129.4 1086 55.9
unitig_578.g16691 Utricularia gibba HOM05D001849 ORTHO05D004689 0.0e+00 1100.1 1065 54.3
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 0.0e+00 1098.6 874 63.5
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 0.0e+00 1085.5 709 77.7
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 3.5e-296 1021.9 703 72.1
SHI25232 Sapria himalayana HOM05D001849 ORTHO05D004689 1.6e-269 933.3 902 55.8
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 1.8e-263 913.3 1106 47.0
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 2.8e-261 906.0 979 49.6
Nitab4.5_0004322g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 1.3e-253 880.6 644 68.3
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 2.6e-251 872.8 601 71.2
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 2.9e-250 869.4 978 48.0
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 2.7e-211 740.0 951 44.7
CARHR088980 Cardamine hirsuta HOM05D001849 ORTHO05D004689 1.6e-200 704.1 501 70.3
Ca_23412_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 8.1e-200 701.8 405 87.9
BraA01t03995Z Brassica rapa HOM05D001849 ORTHO05D004689 7.3e-193 678.7 538 65.8
Os11g0643700 Oryza sativa ssp. japonica HOM05D001849 ORTHO05D004689 2.2e-152 544.3 473 60.0
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 3.1e-151 540.4 1079 34.7
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 9.7e-137 492.3 390 65.6
Cpa.g.sc169.27 Carica papaya HOM05D001849 ORTHO05D004689 5.7e-121 439.9 321 67.0
SEGI_21815 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.0e-117 429.1 391 56.5
Cpa.g.sc169.28 Carica papaya HOM05D001849 ORTHO05D004689 1.1e-87 329.3 293 60.8
Lalb_Chr10g0101331 Lupinus albus HOM05D001849 ORTHO05D004689 9.9e-81 306.2 208 74.5
QL11p014752 Quercus lobata HOM05D001849 ORTHO05D004689 2.1e-70 271.9 297 49.8
CSS0033574 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-69 269.2 221 64.7
Glyma.16G010300 Glycine max HOM05D001849 ORTHO05D004689 5.1e-69 267.3 161 82.0
CSS0020573 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.5e-62 244.6 235 57.9
Cpa.g.sc169.30 Carica papaya HOM05D001849 ORTHO05D004689 2.6e-57 228.4 174 65.5
GSVIVG01016718001 Vitis vinifera HOM05D001849 ORTHO05D004689 2.3e-53 215.3 221 53.8
CSS0047517 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 7.4e-52 210.3 175 64.6
CSS0019722 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.9e-48 197.6 181 60.2
Cc04_g01050 Coffea canephora HOM05D001849 ORTHO05D004689 1.6e-46 192.6 215 52.1
HPP92_021920 Vanilla planifolia HOM05D001849 ORTHO05D004689 1.5e-44 186.0 144 61.8
SEGI_09459 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 1.0e-37 163.3 165 50.3
CAN.G1243.8 Capsicum annuum HOM05D001849 ORTHO05D004689 3.9e-37 161.4 185 51.4
Duzib235G0009 Durio zibethinus HOM05D001849 ORTHO05D004689 1.8e-34 152.5 174 50.0
Lsat_1_v5_gn_3_42421 Lactuca sativa HOM05D001849 ORTHO05D004689 1.8e-34 152.5 165 49.7
MBI18_g40032_MAGBIO Magnolia biondii HOM05D000132 ORTHO05D000058 4.1e-34 151.4 92 76.1
CDE07G1706 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.6e-33 148.7 203 46.8
Cpa.g.sc169.33 Carica papaya HOM05D001849 ORTHO05D004689 6.5e-32 144.1 174 48.9
CSS0036461 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.1e-30 137.5 101 63.4
CSS0036362 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 6.7e-29 134.0 105 60.0
TAR730G0002 Trochodendron aralioides HOM05D001849 ORTHO05D004689 1.1e-28 133.3 154 48.1
Cpa.g.sc169.31 Carica papaya HOM05D001849 ORTHO05D004689 3.3e-28 131.7 91 70.3
Hund18673 Selenicereus undatus HOM05D001849 ORTHO05D004689 3.3e-28 131.7 174 47.7
SEGI_30532 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 9.7e-28 130.2 89 67.4
Lsat_1_v5_gn_8_46020 Lactuca sativa HOM05D001849 ORTHO05D004689 5.3e-26 124.4 97 68.0
Cpa.g.sc169.29 Carica papaya HOM05D001849 ORTHO05D004689 1.7e-24 119.4 94 61.7
HanXRQChr11g0341991 Helianthus annuus HOM05D001849 ORTHO05D004689 5.0e-24 117.9 89 64.0
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 8.8e-21 107.1 482 24.9
Lsat_1_v5_gn_7_52500 Lactuca sativa HOM05D001849 ORTHO05D004689 2.0e-20 105.9 174 38.5
Atru.chr12.2396 Acer truncatum HOM05D001849 ORTHO05D004689 1.8e-18 99.4 139 47.5
CSS0004697 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 4.5e-17 94.7 101 47.5
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 1.7e-16 92.8 720 24.4
SEGI_11558 Sequoiadendron giganteum HOM05D001849 ORTHO05D004689 5.5e-15 87.8 94 50.0
PGSC0003DMG402004368 Solanum tuberosum HOM05D001849 ORTHO05D004689 4.0e-13 81.6 74 54.1
BcaNung06672 Brassica carinata HOM05D001849 ORTHO05D004689 2.0e-12 79.3 207 30.9
Zm00001eb307710 Zea mays HOM05D001849 ORTHO05D004689 3.1e-10 72.0 78 52.6
MBI03_g16538_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-09 69.3 72 51.4
MBI04_g26258_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.0e-09 69.3 77 50.6
SMO304G0058 Selaginella moellendorffii HOM05D042764 ORTHO05D004689 2.0e-09 69.3 191 28.3
MBI13_g27860_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 2.7e-09 68.9 52 67.3
Hma1.2p1_0225F.1_g094790 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 4.5e-09 68.2 127 35.4
BolC2t10453H Brassica oleracea HOM05D001849 ORTHO05D004689 7.7e-09 67.4 53 62.3
Atru.chr12.2376 Acer truncatum HOM05D001849 ORTHO05D004689 2.2e-08 65.9 106 40.6
C02p44100 Brassica napus HOM05D001849 ORTHO05D004689 2.2e-08 65.9 53 62.3
MBI15_g17575_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 6.5e-08 64.3 51 64.7
CSS0002239 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 3.6e-06 58.5 41 68.3


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