Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g005060 Medicago truncatula HOM05D000216 ORTHO05D001131 1.2e-106 389.8 197 100.0
Psat3g186440 Pisum sativum HOM05D000216 ORTHO05D001131 1.7e-95 352.8 219 83.6
LjContig00318g0016482 Lotus japonicus HOM05D000216 ORTHO05D001131 2.0e-93 345.9 215 82.8
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 3.5e-93 345.1 215 83.3
Lalb_Chr09g0335411 Lupinus albus HOM05D000216 ORTHO05D001131 3.1e-89 332.0 220 77.7
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 5.2e-89 331.3 207 83.6
PGR111G0080 Punica granatum HOM05D000216 ORTHO05D001131 5.2e-89 331.3 215 78.6
Potri.013G142232 Populus trichocarpa HOM05D000216 ORTHO05D001131 1.2e-88 330.1 219 76.7
RcHm_v2.0_CPg0502401 Rosa chinensis HOM05D000216 ORTHO05D001131 3.4e-88 328.6 215 78.1
Ah.01g011550 Amaranthus hybridus HOM05D000216 ORTHO05D001131 9.8e-88 327.0 215 78.1
Ah.09g227320 Amaranthus hybridus HOM05D000216 ORTHO05D001131 9.8e-88 327.0 215 78.1
Ah.10g027590 Amaranthus hybridus HOM05D000216 ORTHO05D001131 9.8e-88 327.0 215 78.1
LjContig00489g0016354 Lotus japonicus HOM05D000216 ORTHO05D001131 2.2e-87 325.9 215 77.7
DCAR_032476 Daucus carota HOM05D000216 ORTHO05D001131 3.7e-87 325.1 215 77.7
CAN.G1738.7 Capsicum annuum HOM05D000216 ORTHO05D001131 8.3e-87 323.9 215 77.7
CAN.G892.2 Capsicum annuum HOM05D000216 ORTHO05D001131 8.3e-87 323.9 215 77.7
SabraPtG0001100 Salix brachista HOM05D000216 ORTHO05D001131 8.3e-87 323.9 215 76.3
Sed0007596 Sechium edule HOM05D000216 ORTHO05D001131 2.4e-86 322.4 215 77.2
CsaV3_UNG208330 Cucumis sativus L. HOM05D000216 ORTHO05D001131 3.2e-86 322.0 215 77.2
arahy.Tifrunner.gnm1.ann1.MIWC4Y Arachis hypogaea HOM05D000216 ORTHO05D001131 5.4e-86 321.2 215 75.8
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 9.2e-86 320.5 215 77.2
EL10As4g23395 Beta vulgaris HOM05D000216 ORTHO05D001131 9.2e-86 320.5 215 77.2
Gohir.D01G029500 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-85 320.1 214 77.6
Nn082s42674 Nelumbo nucifera HOM05D000216 ORTHO05D001131 2.7e-85 318.9 215 76.3
PSO548G0026 Papaver somniferum HOM05D000216 ORTHO05D001131 1.0e-84 317.0 215 75.8
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 1.1e-83 313.5 215 75.3
BolSC45t60940H Brassica oleracea HOM05D000216 ORTHO05D001131 9.5e-83 310.5 215 74.4
BraSC140t45600Z Brassica rapa HOM05D000216 ORTHO05D001131 3.6e-82 308.5 215 74.0
BraSC140t45606Z Brassica rapa HOM05D000216 ORTHO05D001131 3.6e-82 308.5 215 74.0
BraSC151t45705Z Brassica rapa HOM05D000216 ORTHO05D001131 3.6e-82 308.5 215 74.0
BraSC58t46479Z Brassica rapa HOM05D000216 ORTHO05D001131 3.6e-82 308.5 215 74.0
Sc15g0001760 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.6e-82 308.5 216 74.5
Sc25g0001960 Simmondsia chinensis HOM05D000216 ORTHO05D001131 3.6e-82 308.5 216 74.5
Hund27562 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27656 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27699 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27744 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27840 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27867 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund27998 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28018 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28026 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28131 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28163 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28189 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28237 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28247 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28260 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28336 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28353 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28578 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28618 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28642 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund28914 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund29207 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund29354 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund29389 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund29745 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
Hund30063 Selenicereus undatus HOM05D000216 ORTHO05D001131 6.2e-82 307.8 217 72.8
ATCG00190 Arabidopsis thaliana HOM05D000216 ORTHO05D001131 8.1e-82 307.4 215 74.4
Hund08566 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund18042 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund19314 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund23975 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund25935 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27452 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27608 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27670 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27763 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27805 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27822 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund27916 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28058 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28085 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28123 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28139 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28208 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28385 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28398 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28500 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28686 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28697 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28702 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28806 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28824 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28835 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28904 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund28984 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund29113 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund29197 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund29478 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund29486 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund29645 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
Hund30018 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-81 307.0 215 73.5
unitig_91.g26498 Utricularia gibba HOM05D000216 ORTHO05D001131 1.8e-81 306.2 207 75.4
Hund28154 Selenicereus undatus HOM05D000216 ORTHO05D001131 8.9e-81 303.9 217 71.9
BNapus_Darmor_BZH_scaffold_253p00080 Brassica napus HOM05D000216 ORTHO05D001131 4.4e-80 301.6 208 74.5
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 3.5e-77 292.0 216 71.8
Lsat_1_v5_gn_1_118620 Lactuca sativa HOM05D000216 ORTHO05D001131 6.0e-77 291.2 207 71.0
Lsat_1_v5_gn_1_92840 Lactuca sativa HOM05D000216 ORTHO05D001131 6.0e-77 291.2 207 71.0
Hund28555 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.9e-76 288.5 204 73.0
HanXRQChr11g0326591 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-75 286.6 207 70.0
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-75 286.6 207 70.0
Hund27928 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.1e-73 280.4 200 72.5
Hund27944 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-73 280.0 199 72.9
Hund28292 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-73 280.0 199 72.9
Hund28372 Selenicereus undatus HOM05D000216 ORTHO05D001131 1.4e-73 280.0 199 72.9
Sed0002232 Sechium edule HOM05D000216 ORTHO05D001131 1.8e-73 279.6 197 74.1
Hund28715 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.1e-73 278.9 199 72.4
Hund28280 Selenicereus undatus HOM05D000216 ORTHO05D001131 2.6e-72 275.8 196 73.0
HanXRQChr11g0340031 Helianthus annuus HOM05D000216 ORTHO05D001131 4.4e-72 275.0 182 76.4
HanXRQChr00c0165g0572161 Helianthus annuus HOM05D000216 ORTHO05D001131 1.1e-70 270.4 200 70.0
Peaxi162Scf00608g00014 Petunia axillaris HOM05D000216 ORTHO05D001131 8.7e-68 260.8 173 75.7
C04p22650 Brassica napus HOM05D000216 ORTHO05D001131 4.9e-63 245.0 173 71.7
BolSC37t60764H Brassica oleracea HOM05D000216 ORTHO05D001131 1.9e-62 243.0 172 71.5
Psat0s6638g0160 Pisum sativum HOM05D000216 ORTHO05D001131 2.1e-61 239.6 160 76.9
Psat0s5655g0160 Pisum sativum HOM05D000216 ORTHO05D001131 6.0e-61 238.0 231 58.9
BolC7t41731H Brassica oleracea HOM05D000216 ORTHO05D001131 1.7e-60 236.5 172 70.3
Migut.D01417 Erythranthe guttata HOM05D000216 ORTHO05D001131 8.1e-58 227.6 156 75.0
arahy.Tifrunner.gnm1.ann1.Q51NGA Arachis hypogaea HOM05D000216 ORTHO05D001131 4.9e-55 218.4 153 73.2
Migut.H02461 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.4e-54 216.9 152 73.7
BolSC45t60873H Brassica oleracea HOM05D000216 ORTHO05D001131 9.3e-54 214.2 160 67.5
Migut.D01344 Erythranthe guttata HOM05D000216 ORTHO05D001131 2.1e-50 203.0 191 59.7
Psat7g199200 Pisum sativum HOM05D000216 ORTHO05D001131 2.9e-47 192.6 101 94.1
VMungo1015G0001 Vigna mungo HOM05D000216 ORTHO05D001131 2.7e-45 186.0 101 91.1
BolSC49t61196H Brassica oleracea HOM05D000216 ORTHO05D001131 4.6e-45 185.3 101 89.1
AL2G20930 Arabidopsis lyrata HOM05D000216 ORTHO05D001131 1.3e-44 183.7 120 76.7
CAN.G219.20 Capsicum annuum HOM05D000216 ORTHO05D001131 2.3e-44 183.0 101 90.1
CAN.G939.17 Capsicum annuum HOM05D000216 ORTHO05D001131 2.3e-44 183.0 101 90.1
GSVIVG01035251001 Vitis vinifera HOM05D000216 ORTHO05D001131 6.7e-44 181.4 101 88.1
Lj2C1237G9 Lonicera japonica HOM05D000216 ORTHO05D001131 3.3e-43 179.1 101 88.1
Gorai.008G095600 Gossypium raimondii HOM05D000216 ORTHO05D001131 4.8e-42 175.3 100 88.0
Gohir.D12G085301 Gossypium hirsutum HOM05D000216 ORTHO05D001131 6.2e-42 174.9 100 88.0
Gohir.D02G042933 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.1e-41 174.1 131 67.2
CAN.G100.43 Capsicum annuum HOM05D000216 ORTHO05D001131 2.9e-39 166.0 101 84.2
CAN.G1648.7 Capsicum annuum HOM05D000216 ORTHO05D001131 2.9e-39 166.0 95 87.4
Gohir.D05G027450 Gossypium hirsutum HOM05D000216 ORTHO05D001131 3.2e-38 162.5 89 91.0
Gorai.011G273200 Gossypium raimondii HOM05D000216 ORTHO05D001131 6.1e-37 158.3 100 81.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 1.8e-36 156.8 83 92.8
Gorai.009G027600 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.3e-36 156.4 89 87.6
Nitab4.5_0001715g0110 Nicotiana tabacum HOM05D000216 ORTHO05D001131 5.3e-33 145.2 132 65.9
BraSC58t46409Z Brassica rapa HOM05D000216 ORTHO05D001131 6.9e-33 144.8 94 76.6
Eucgr.E02520 Eucalyptus grandis HOM05D000216 ORTHO05D001131 1.1e-30 137.5 94 74.5
Psat4g147960 Pisum sativum HOM05D000216 ORTHO05D001131 1.4e-30 137.1 73 91.8
Gorai.005G236000 Gossypium raimondii HOM05D000216 ORTHO05D001131 7.2e-30 134.8 87 77.0
Gohir.A04G053721 Gossypium hirsutum HOM05D000216 ORTHO05D001131 9.4e-30 134.4 87 78.2
Eucgr.C02946 Eucalyptus grandis HOM05D000216 ORTHO05D001131 2.1e-29 133.3 70 94.3
TPR.G32479 Trifolium pratense HOM05D000216 ORTHO05D001131 7.9e-29 131.3 77 81.8
VMungo0647G1325 Vigna mungo HOM05D000216 ORTHO05D001131 2.4e-25 119.8 73 78.1
Mapoly0019s0087 Marchantia polymorpha HOM05D000216 ORTHO05D001131 1.5e-24 117.1 129 47.3
SMO086G0059 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.5e-24 117.1 194 37.1
SMO161G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.5e-24 117.1 194 37.1
SMO168G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.5e-24 117.1 194 37.1
SMO299G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 1.5e-24 117.1 194 37.1
SMO237G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 4.5e-24 115.5 191 37.2
ClCG07G004170 Citrullus lanatus HOM05D000216 ORTHO05D001131 3.2e-22 109.4 60 86.7
Eucgr.B02475 Eucalyptus grandis HOM05D000216 ORTHO05D001131 7.2e-22 108.2 81 74.1
Solyc02g067590.2 Solanum lycopersicum HOM05D000216 ORTHO05D001131 6.7e-20 101.7 54 85.2
Gorai.005G047300 Gossypium raimondii HOM05D000216 ORTHO05D001131 1.7e-18 97.1 53 81.1
Solyc10g017920.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 2.2e-18 96.7 54 83.3
SMO113G0001 Selaginella moellendorffii HOM05D000216 ORTHO05D001131 6.3e-18 95.1 146 37.7
Thecc.07G188500 Theobroma cacao HOM05D000216 ORTHO05D001131 3.1e-17 92.8 54 87.0
Gorai.002G188200 Gossypium raimondii HOM05D000216 ORTHO05D001131 5.9e-16 88.6 63 71.4
Gohir.A01G160850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.3e-15 87.4 63 68.3
BolSC46t60987H Brassica oleracea HOM05D000216 ORTHO05D001131 8.5e-15 84.7 57 73.7
CSS0046430 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D001131 3.2e-14 82.8 56 76.8
Gohir.D01G151850 Gossypium hirsutum HOM05D000216 ORTHO05D001131 1.2e-13 80.9 56 75.0
Gorai.007G168000 Gossypium raimondii HOM05D000216 ORTHO05D001131 2.1e-13 80.1 65 58.5
ClCG01G011250 Citrullus lanatus HOM05D000216 ORTHO05D001131 1.5e-11 73.9 57 66.7
Migut.E00860 Erythranthe guttata HOM05D000216 ORTHO05D001131 1.5e-11 73.9 44 79.5
Hma1.2p1_0094F.1_g047108 Hydrangea macrophylla HOM05D000216 ORTHO05D001131 4.4e-11 72.4 42 88.1
Solyc04g026310.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 9.7e-11 71.2 48 72.9
BraSC25t45880Z Brassica rapa HOM05D000216 ORTHO05D001131 3.7e-10 69.3 58 60.3
Solyc12g035950.1 Solanum lycopersicum HOM05D000216 ORTHO05D001131 5.3e-09 65.5 43 72.1
BolSC44t60850H Brassica oleracea HOM05D000216 ORTHO05D001131 1.2e-08 64.3 42 69.0
Nitab4.5_0000029g0010 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.5e-06 56.6 30 80.0
SGA_v2.0_scaffold119G32686 Striga asiatica HOM05D000216 ORTHO05D001131 9.4e-06 54.7 33 75.8


User provided reference genes

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