Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g006225 Medicago truncatula HOM05D005536 ORTHO05D266164 1.4e-41 172.6 87 100.0
Lj6g0001247 Lotus japonicus HOM05D005536 ORTHO05D006999 1.6e-10 69.3 72 54.2
Medtr2g006350 Medicago truncatula HOM05D005536 ORTHO05D006999 1.6e-10 69.3 76 51.3
arahy.Tifrunner.gnm1.ann1.DFQ1AC Arachis hypogaea HOM05D005536 ORTHO05D006999 2.1e-10 68.9 76 52.6
GSVIVG01023338001 Vitis vinifera HOM05D005536 ORTHO05D006999 3.6e-10 68.2 74 54.1
TPR.G2082 Trifolium pratense HOM05D005536 ORTHO05D006999 1.1e-09 66.6 73 53.4
Oeu049828.1 Olea europaea HOM05D005536 ORTHO05D006999 1.4e-09 66.2 76 51.3
arahy.Tifrunner.gnm1.ann1.CHH5X5 Arachis hypogaea HOM05D005536 ORTHO05D006999 1.8e-09 65.9 76 51.3
Psat1g222160 Pisum sativum HOM05D005536 ORTHO05D006999 2.4e-09 65.5 72 51.4
Cfa005500 Carpinus fangiana HOM05D005536 ORTHO05D006999 4.0e-09 64.7 72 50.0
Glyma.12G169900 Glycine max HOM05D005536 ORTHO05D006999 4.0e-09 64.7 72 50.0
CARHR023320 Cardamine hirsuta HOM05D005536 ORTHO05D006999 5.3e-09 64.3 72 50.0
Haze_01749 Corylus avellana HOM05D005536 ORTHO05D006999 5.3e-09 64.3 76 48.7
Dinv19387 Davidia involucrata HOM05D005536 ORTHO05D006999 5.3e-09 64.3 76 48.7
Cpa.g.c34456.1 Carica papaya HOM05D005536 ORTHO05D006999 6.9e-09 63.9 76 48.7
Manes.10G122900 Manihot esculenta HOM05D005536 ORTHO05D006999 1.2e-08 63.2 76 50.0
THA.LOC104806870 Tarenaya hassleriana HOM05D005536 ORTHO05D006999 1.2e-08 63.2 73 47.9
Gohir.D13G034200 Gossypium hirsutum HOM05D005536 ORTHO05D006999 1.5e-08 62.8 76 47.4
Gorai.013G038700 Gossypium raimondii HOM05D005536 ORTHO05D006999 1.5e-08 62.8 76 47.4
Thecc.02G089300 Theobroma cacao HOM05D005536 ORTHO05D006999 1.5e-08 62.8 76 47.4
Glyma.08G188200 Glycine max HOM05D005536 ORTHO05D006999 2.6e-08 62.0 72 50.0
MD15G1428400 Malus domestica HOM05D005536 ORTHO05D006999 2.6e-08 62.0 73 50.7
unitig_749.g13511 Utricularia gibba HOM05D005536 ORTHO05D006999 2.6e-08 62.0 74 47.3
VMungo0540G0609 Vigna mungo HOM05D005536 ORTHO05D006999 2.6e-08 62.0 72 48.6
DCAR_006692 Daucus carota HOM05D005536 ORTHO05D006999 3.4e-08 61.6 72 47.2
Lalb_Chr20g0123601 Lupinus albus HOM05D005536 ORTHO05D006999 3.4e-08 61.6 76 47.4
AT1G22940 Arabidopsis thaliana HOM05D005536 ORTHO05D006999 4.4e-08 61.2 72 47.2
Ca_00061_v3 Cicer arietinum L. HOM05D005536 ORTHO05D006999 4.4e-08 61.2 74 47.3
ECA236G1742 Erigeron canadensis HOM05D005536 ORTHO05D006999 4.4e-08 61.2 74 47.3
Thhalv10007358m.g Eutrema salsugineum HOM05D005536 ORTHO05D006999 4.4e-08 61.2 72 47.2
FvH4_5g28860 Fragaria vesca HOM05D005536 ORTHO05D006999 4.4e-08 61.2 76 44.7
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 5.8e-08 60.8 72 47.2
COL.COLO4_11769 Corchorus olitorius HOM05D005536 ORTHO05D006999 5.8e-08 60.8 72 47.2
Peaxi162Scf00011g00635 Petunia axillaris HOM05D005536 ORTHO05D006999 5.8e-08 60.8 72 48.6
Atru.BG.35.p Acer truncatum HOM05D005536 ORTHO05D006999 7.6e-08 60.5 72 47.2
Atru.chr6.551 Acer truncatum HOM05D005536 ORTHO05D006999 7.6e-08 60.5 72 47.2
Ciclev10000782m.g Citrus clementina HOM05D005536 ORTHO05D006999 7.6e-08 60.5 72 47.2
SalBow8G1128 Salvia bowleyana HOM05D005536 ORTHO05D004100 7.6e-08 60.5 74 47.3
Aa31LG7G6950 Aethionema arabicum HOM05D005536 ORTHO05D006999 9.9e-08 60.1 72 47.2
CSS0004244 Camellia sinensis var. sinensis HOM05D005536 ORTHO05D006999 9.9e-08 60.1 72 47.2
CANSAT11G0651 Cannabis sativa HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 46.1
FAN04G2224 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 44.7
FAN08G1062 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 44.7
FAN13G0194 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 44.7
FAN18G3948 Fragaria x ananassa HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 44.7
Hma1.2p1_1108F.1_g257740 Hydrangea macrophylla HOM05D005536 ORTHO05D006999 9.9e-08 60.1 72 50.0
Phvul.006G216300 Phaseolus vulgaris HOM05D005536 ORTHO05D006999 9.9e-08 60.1 72 48.6
QL02p099453 Quercus lobata HOM05D005536 ORTHO05D006999 9.9e-08 60.1 72 47.2
RcHm_v2.0_Chr7g0221201 Rosa chinensis HOM05D005536 ORTHO05D006999 9.9e-08 60.1 76 44.7
BcaC05g26200 Brassica carinata HOM05D005536 ORTHO05D006999 1.3e-07 59.7 72 47.2
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 1.3e-07 59.7 72 47.2
C05p22080 Brassica napus HOM05D005536 ORTHO05D006999 1.3e-07 59.7 72 47.2
BolC5t30904H Brassica oleracea HOM05D005536 ORTHO05D006999 1.3e-07 59.7 72 47.2
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 1.3e-07 59.7 74 47.3
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 1.3e-07 59.7 76 46.1
Sed0010884 Sechium edule HOM05D005536 ORTHO05D006999 1.3e-07 59.7 74 45.9
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 1.3e-07 59.7 74 43.2
BraA09t39668Z Brassica rapa HOM05D005536 ORTHO05D006999 1.7e-07 59.3 72 45.8
CiPaw.05G049900 Carya illinoinensis HOM05D005536 ORTHO05D006999 1.7e-07 59.3 76 47.4
DCAR_025347 Daucus carota HOM05D005536 ORTHO05D006999 1.7e-07 59.3 72 45.8
Nn1g08381 Nelumbo nucifera HOM05D005536 ORTHO05D006999 1.7e-07 59.3 74 44.6
Prupe.1G573200 Prunus persica HOM05D005536 ORTHO05D006999 1.7e-07 59.3 76 46.1
SGA_v2.0_scaffold110G31339 Striga asiatica HOM05D005536 ORTHO05D006999 1.7e-07 59.3 74 43.2
HanXRQChr16g0512011 Helianthus annuus HOM05D005536 ORTHO05D006999 2.2e-07 58.9 74 45.9
Nitab4.5_0000948g0240 Nicotiana tabacum HOM05D005536 ORTHO05D006999 2.2e-07 58.9 76 44.7
Nitab4.5_0002698g0120 Nicotiana tabacum HOM05D005536 ORTHO05D006999 2.2e-07 58.9 76 44.7
Solyc01g103950.4 Solanum lycopersicum HOM05D005536 ORTHO05D006999 2.2e-07 58.9 76 44.7
TWI59G0084 Tripterygium wilfordii HOM05D005536 ORTHO05D006999 2.2e-07 58.9 76 48.7
ClCG11G000890 Citrullus lanatus HOM05D005536 ORTHO05D006999 2.9e-07 58.5 74 45.9
Eucgr.G00559 Eucalyptus grandis HOM05D005536 ORTHO05D006999 2.9e-07 58.5 74 43.2
Lsat_1_v5_gn_7_79100 Lactuca sativa HOM05D005536 ORTHO05D006999 2.9e-07 58.5 72 43.1
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 2.9e-07 58.5 72 45.8
PGSC0003DMG401023772 Solanum tuberosum HOM05D005536 ORTHO05D006999 2.9e-07 58.5 76 43.4
Ah.03g139170 Amaranthus hybridus HOM05D005536 ORTHO05D006999 3.8e-07 58.2 74 45.9
CAN.G798.23 Capsicum annuum HOM05D005536 ORTHO05D006999 3.8e-07 58.2 73 46.6
vmacro01743 Vaccinium macrocarpon HOM05D005536 ORTHO05D006999 3.8e-07 58.2 72 43.1
Carub.0001s2244 Capsella rubella HOM05D005536 ORTHO05D006999 4.9e-07 57.8 72 45.8
AUR62007953 Chenopodium quinoa HOM05D005536 ORTHO05D006999 4.9e-07 57.8 74 45.9
Cc02_g22780 Coffea canephora HOM05D005536 ORTHO05D006999 4.9e-07 57.8 74 45.9
PSO017G0725 Papaver somniferum HOM05D005536 ORTHO05D006999 4.9e-07 57.8 72 44.4
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 4.9e-07 57.8 76 47.4
Actinidia27730 Actinidia chinensis HOM05D005536 ORTHO05D006999 6.4e-07 57.4 72 43.1
BcaB07g32292 Brassica carinata HOM05D005536 ORTHO05D006999 6.4e-07 57.4 72 45.8
Sabra03G0008600 Salix brachista HOM05D005536 ORTHO05D006999 6.4e-07 57.4 76 46.1
Hund15496 Selenicereus undatus HOM05D005536 ORTHO05D006999 6.4e-07 57.4 74 45.9
Migut.B00813 Erythranthe guttata HOM05D005536 ORTHO05D006999 8.4e-07 57.0 73 45.2
AUR62003134 Chenopodium quinoa HOM05D005536 ORTHO05D006999 1.1e-06 56.6 72 47.2
Actinidia39023 Actinidia chinensis HOM05D005536 ORTHO05D006999 1.4e-06 56.2 72 44.4
PSO170G4094 Papaver somniferum HOM05D005536 ORTHO05D006999 1.4e-06 56.2 72 43.1
SEGI_00443 Sequoiadendron giganteum HOM05D005536 ORTHO05D006999 1.4e-06 56.2 74 41.9
CBR_g6345 Chara braunii HOM05D005536 ORTHO05D006999 1.9e-06 55.8 74 43.2
SMO244G0051 Selaginella moellendorffii HOM05D005536 ORTHO05D006999 1.9e-06 55.8 72 41.7
Sopen01g046340 Solanum pennellii HOM05D005536 ORTHO05D006999 1.9e-06 55.8 76 43.4
Lj5A254G85 Lonicera japonica HOM05D005536 ORTHO05D006999 2.4e-06 55.5 76 44.7
Sc18g0006730 Simmondsia chinensis HOM05D005536 ORTHO05D006999 2.4e-06 55.5 72 40.3
Aqoxy5G01212 Aquilegia oxysepala HOM05D005536 ORTHO05D006999 3.2e-06 55.1 74 43.2
CsaV3_5G012850 Cucumis sativus L. HOM05D005536 ORTHO05D006999 3.2e-06 55.1 76 44.7
MSTRG.20308 Avicennia marina HOM05D005536 ORTHO05D006999 4.2e-06 54.7 74 40.5
MBI06_g20964_MAGBIO Magnolia biondii HOM05D005536 ORTHO05D006999 5.4e-06 54.3 74 41.9
MELO3C022605.2 Cucumis melo HOM05D005536 ORTHO05D006999 7.1e-06 53.9 76 43.4
Rhsim11G0127400 Rhododendron simsii HOM05D005536 ORTHO05D006999 7.1e-06 53.9 72 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4801 Anthoceros agrestis HOM05D005536 ORTHO05D006999 9.3e-06 53.5 74 40.5
EL10Ac6g14966 Beta vulgaris HOM05D005536 ORTHO05D006999 9.3e-06 53.5 73 42.5
PGR044G0806 Punica granatum HOM05D005536 ORTHO05D006999 9.3e-06 53.5 72 43.1
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 9.3e-06 53.5 74 41.9


User provided reference genes

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