Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0122s0031 Marchantia polymorpha HOM05D004365 ORTHO05D253640 1.5e-112 409.5 193 100.0
Haze_26633 Corylus avellana HOM05D004365 ORTHO05D005123 8.1e-10 68.2 86 39.5
arahy.Tifrunner.gnm1.ann1.MX4EIU Arachis hypogaea HOM05D004365 ORTHO05D005123 8.9e-09 64.7 84 40.5
Mapoly0087s0071 Marchantia polymorpha HOM05D004365 ORTHO05D005123 1.5e-08 63.9 88 39.8
ATR0665G356 Amborella trichopoda HOM05D004365 ORTHO05D005123 2.6e-08 63.2 88 38.6
ECA246G3323 Erigeron canadensis HOM05D004365 ORTHO05D005123 2.6e-08 63.2 88 36.4
Aqoxy2G02775 Aquilegia oxysepala HOM05D004365 ORTHO05D005123 3.4e-08 62.8 88 35.2
Dinv15193 Davidia involucrata HOM05D004365 ORTHO05D005123 3.4e-08 62.8 112 32.1
HanXRQChr05g0145921 Helianthus annuus HOM05D004365 ORTHO05D005123 3.4e-08 62.8 88 36.4
MSTRG.21775 Avicennia marina HOM05D004365 ORTHO05D005123 4.4e-08 62.4 88 36.4
SMO364G0316 Selaginella moellendorffii HOM05D004365 ORTHO05D005123 4.4e-08 62.4 88 36.4
unitig_22.g6354 Utricularia gibba HOM05D004365 ORTHO05D005123 4.4e-08 62.4 88 36.4
Cc03_g00970 Coffea canephora HOM05D004365 ORTHO05D005123 5.8e-08 62.0 88 35.2
Glyma.09G037400 Glycine max HOM05D004365 ORTHO05D005123 5.8e-08 62.0 88 35.2
Glyma.15G142700 Glycine max HOM05D004365 ORTHO05D005123 5.8e-08 62.0 88 37.5
Lsat_1_v5_gn_6_116841 Lactuca sativa HOM05D004365 ORTHO05D005123 5.8e-08 62.0 88 36.4
Psat6g078760 Pisum sativum HOM05D004365 ORTHO05D005123 5.8e-08 62.0 88 35.2
Glyma.07G241200 Glycine max HOM05D004365 ORTHO05D005123 7.6e-08 61.6 98 33.7
Oeu016485.1 Olea europaea HOM05D004365 ORTHO05D005123 7.6e-08 61.6 88 38.6
VMungo1215G2752 Vigna mungo HOM05D004365 ORTHO05D005123 7.6e-08 61.6 88 36.4
VMungo1309G0143 Vigna mungo HOM05D004365 ORTHO05D005123 7.6e-08 61.6 89 34.8
arahy.Tifrunner.gnm1.ann1.C4ZZV2 Arachis hypogaea HOM05D004365 ORTHO05D005123 9.9e-08 61.2 92 31.5
CARHR092230 Cardamine hirsuta HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 34.1
Medtr2g034520 Medicago truncatula HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Nitab4.5_0000647g0090 Nicotiana tabacum HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Peaxi162Scf00164g01133 Petunia axillaris HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Phvul.009G256100 Phaseolus vulgaris HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Solyc05g053430.3 Solanum lycopersicum HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Sopen05g031930 Solanum pennellii HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
PGSC0003DMG400027213 Solanum tuberosum HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
TPR.G5757 Trifolium pratense HOM05D004365 ORTHO05D005123 9.9e-08 61.2 88 35.2
Actinidia13364 Actinidia chinensis HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 36.4
CSS0008168 Camellia sinensis var. sinensis HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 35.2
Haze_01277 Corylus avellana HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 35.2
Lalb_Chr18g0058831 Lupinus albus HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 35.2
QL06p011635 Quercus lobata HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 35.2
TWI73G0828 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 1.3e-07 60.8 88 37.5
Dinv44302 Davidia involucrata HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 36.4
Thhalv10021989m.g Eutrema salsugineum HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 35.2
Nn4g25611 Nelumbo nucifera HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 35.2
Sed0001961 Sechium edule HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 35.2
Sed0006030 Sechium edule HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 35.2
Sc05g0009630 Simmondsia chinensis HOM05D004365 ORTHO05D005123 1.7e-07 60.5 88 37.5
Aa31LG8G4020 Aethionema arabicum HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
CANSAT54G2312 Cannabis sativa HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
CiPaw.01G139700 Carya illinoinensis HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
Ca_01870_v3 Cicer arietinum L. HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 36.4
ClCG05G006460 Citrullus lanatus HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
Thhalv10026603m.g Eutrema salsugineum HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 37.5
Hma1.2p1_0013F.1_g008720 Hydrangea macrophylla HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
Phvul.003G112600 Phaseolus vulgaris HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 36.4
PGR004G2507 Punica granatum HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
THA.LOC104820300 Tarenaya hassleriana HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 35.2
TWI09G0163 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 2.2e-07 60.1 88 34.1
AL7G38770 Arabidopsis lyrata HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
AT4G16265 Arabidopsis thaliana HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
BcaC09g50324 Brassica carinata HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
BcaNung00211 Brassica carinata HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
A01p21300 Brassica napus HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
Carub.0007s2525 Capsella rubella HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
DCAR_023347 Daucus carota HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 37.5
Mapoly0028s0097 Marchantia polymorpha HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 35.2
Prupe.1G122000 Prunus persica HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 35.2
RcHm_v2.0_Chr4g0424591 Rosa chinensis HOM05D004365 ORTHO05D005123 2.9e-07 59.7 88 35.2
Lj4g0028172 Lotus japonicus HOM05D004365 ORTHO05D005123 3.7e-07 59.3 88 34.1
Pp3c18_17910 Physcomitrium patens HOM05D004365 ORTHO05D005123 3.7e-07 59.3 88 35.2
TPR.G10905 Trifolium pratense HOM05D004365 ORTHO05D005123 3.7e-07 59.3 88 31.8
BcaC04g21057 Brassica carinata HOM05D004365 ORTHO05D005123 4.9e-07 58.9 95 32.6
C09p36150 Brassica napus HOM05D004365 ORTHO05D005123 4.9e-07 58.9 95 32.6
BolC9t56454H Brassica oleracea HOM05D004365 ORTHO05D005123 4.9e-07 58.9 95 32.6
CARHR222650 Cardamine hirsuta HOM05D004365 ORTHO05D005123 4.9e-07 58.9 88 36.4
SEGI_37796 Sequoiadendron giganteum HOM05D004365 ORTHO05D005123 4.9e-07 58.9 88 35.2
Zm00001eb088460 Zea mays HOM05D004365 ORTHO05D005123 4.9e-07 58.9 88 36.4
Ah.13g072000 Amaranthus hybridus HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 34.1
Cpa.g.sc9.86 Carica papaya HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 35.2
Ciclev10006256m.g Citrus clementina HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 35.2
Lj6g0010863 Lotus japonicus HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 34.1
Manes.03G202800 Manihot esculenta HOM05D004365 ORTHO05D005123 6.4e-07 58.5 84 35.7
TAR365G0998 Trochodendron aralioides HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 34.1
GSVIVG01035016001 Vitis vinifera HOM05D004365 ORTHO05D005123 6.4e-07 58.5 88 34.1
Eucgr.H02666 Eucalyptus grandis HOM05D004365 ORTHO05D005123 8.4e-07 58.2 88 34.1
PSO761G0124 Papaver somniferum HOM05D004365 ORTHO05D005123 8.4e-07 58.2 88 34.1
SMO174G0170 Selaginella moellendorffii HOM05D004365 ORTHO05D005123 8.4e-07 58.2 88 35.2
TWI53G1753 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 8.4e-07 58.2 86 34.9
CDE02G0371 Ceratophyllum demersum HOM05D004365 ORTHO05D005123 1.1e-06 57.8 88 36.4
CDE09G0896 Ceratophyllum demersum HOM05D004365 ORTHO05D005123 1.1e-06 57.8 88 36.4
Os07g0615800 Oryza sativa ssp. japonica HOM05D004365 ORTHO05D005123 1.1e-06 57.8 90 34.4
BcaB08g34342 Brassica carinata HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
BcaC07g37975 Brassica carinata HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
A08p12300 Brassica napus HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
BolC8t48354H Brassica oleracea HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
Cre12.g505750 Chlamydomonas reinhardtii HOM05D004365 ORTHO05D005123 1.4e-06 57.4 93 35.5
FvH4_4g19480 Fragaria vesca HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
FAN07G2773 Fragaria x ananassa HOM05D004365 ORTHO05D005123 1.4e-06 57.4 88 36.4
Lalb_Chr08g0234431 Lupinus albus HOM05D004365 ORTHO05D005123 1.4e-06 57.4 85 32.9
PSO210G6722 Papaver somniferum HOM05D004365 ORTHO05D005123 1.9e-06 57.0 88 34.1
Os03g0102200 Oryza sativa ssp. japonica HOM05D004365 ORTHO05D005123 2.4e-06 56.6 88 33.0
MD13G1156200 Malus domestica HOM05D004365 ORTHO05D005123 3.2e-06 56.2 88 35.2
TWI53G0542 Tripterygium wilfordii HOM05D004365 ORTHO05D005123 3.2e-06 56.2 86 34.9
MD16G1157100 Malus domestica HOM05D004365 ORTHO05D005123 4.1e-06 55.8 88 36.4


User provided reference genes

Program Settings