Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0092s0023 Marchantia polymorpha HOM05D007020 ORTHO05D008935 4.4e-189 664.5 331 100.0
Pp3c21_5880 Physcomitrium patens HOM05D007020 ORTHO05D008935 1.8e-81 307.0 266 61.3
AagrBONN_evm.TU.Sc2ySwM_228.144 Anthoceros agrestis HOM05D007020 ORTHO05D008935 1.3e-76 290.8 242 61.6
BcaC08g47303 Brassica carinata HOM05D007020 ORTHO05D008935 1.0e-68 264.6 292 50.3
TAR376G1009 Trochodendron aralioides HOM05D007020 ORTHO05D008935 1.5e-67 260.8 330 47.0
Gohir.D05G186100 Gossypium hirsutum HOM05D007020 ORTHO05D008935 7.2e-67 258.5 313 47.6
Cc10_g01170 Coffea canephora HOM05D007020 ORTHO05D008935 1.6e-66 257.3 275 50.5
THA.LOC104809629 Tarenaya hassleriana HOM05D007020 ORTHO05D008935 2.1e-66 256.9 270 51.1
Gohir.A05G183200 Gossypium hirsutum HOM05D007020 ORTHO05D008935 2.7e-66 256.5 313 47.9
Gorai.009G191500 Gossypium raimondii HOM05D000059 ORTHO05D008935 2.7e-66 256.5 271 51.3
SMO169G0131 Selaginella moellendorffii HOM05D007020 ORTHO05D008935 2.7e-66 256.5 269 52.8
QL02p012883 Quercus lobata HOM05D007020 ORTHO05D008935 4.7e-66 255.8 308 47.4
Duzib093G0969 Durio zibethinus HOM05D007020 ORTHO05D008935 8.0e-66 255.0 268 53.0
vmacro21850 Vaccinium macrocarpon HOM05D007020 ORTHO05D008935 1.0e-65 254.6 320 48.1
Rhsim06G0012300 Rhododendron simsii HOM05D007020 ORTHO05D008935 1.4e-65 254.2 304 49.7
TAR633G1459 Trochodendron aralioides HOM05D007020 ORTHO05D008935 1.4e-65 254.2 320 46.9
CiPaw.07G144000 Carya illinoinensis HOM05D007020 ORTHO05D008935 1.8e-65 253.8 294 49.0
Haze_22697 Corylus avellana HOM05D007020 ORTHO05D008935 1.8e-65 253.8 313 47.9
Lalb_Chr08g0246281 Lupinus albus HOM05D007020 ORTHO05D008935 3.0e-65 253.1 313 47.9
CsaV3_2G024410 Cucumis sativus L. HOM05D007020 ORTHO05D008935 4.0e-65 252.7 290 48.6
Potri.002G016800 Populus trichocarpa HOM05D007020 ORTHO05D008935 6.8e-65 251.9 287 50.5
MSTRG.25275 Avicennia marina HOM05D000001 ORTHO05D009837 1.2e-64 251.1 298 47.0
Ciclev10001736m.g Citrus clementina HOM05D007020 ORTHO05D008935 1.2e-64 251.1 262 50.0
PGR031G0358 Punica granatum HOM05D007020 ORTHO05D008935 1.2e-64 251.1 275 50.2
Sabra02G0013400 Salix brachista HOM05D007020 ORTHO05D008935 1.5e-64 250.8 287 50.9
BolC6t40035H Brassica oleracea HOM05D007020 ORTHO05D008935 2.0e-64 250.4 293 49.8
Dinv31889 Davidia involucrata HOM05D007020 ORTHO05D008935 2.0e-64 250.4 295 48.5
Thecc.08G051000 Theobroma cacao HOM05D007020 ORTHO05D008935 2.6e-64 250.0 271 50.6
Thhalv10018588m.g Eutrema salsugineum HOM05D007020 ORTHO05D008935 4.4e-64 249.2 268 51.5
Os06g0717400 Oryza sativa ssp. japonica HOM05D007020 ORTHO05D008935 5.7e-64 248.8 294 48.6
Sp5g31160 Schrenkiella parvula HOM05D007020 ORTHO05D008935 5.7e-64 248.8 268 51.1
MELO3C011342.2 Cucumis melo HOM05D007020 ORTHO05D008935 7.5e-64 248.4 297 47.8
Sed0026116 Sechium edule HOM05D007020 ORTHO05D008935 7.5e-64 248.4 270 50.4
SEGI_18542 Sequoiadendron giganteum HOM05D007020 ORTHO05D008935 7.5e-64 248.4 266 50.4
Atru.chr13.224 Acer truncatum HOM05D007020 ORTHO05D008935 9.8e-64 248.1 304 47.0
Lj4A801T43 Lonicera japonica HOM05D007020 ORTHO05D008935 1.3e-63 247.7 297 48.1
Lj1g0017386 Lotus japonicus HOM05D007020 ORTHO05D008935 1.3e-63 247.7 271 50.9
Carub.0002s2293 Capsella rubella HOM05D007020 ORTHO05D008935 1.7e-63 247.3 267 50.6
Cfa014002 Carpinus fangiana HOM05D007020 ORTHO05D008935 2.2e-63 246.9 302 47.4
Migut.C00895 Erythranthe guttata HOM05D007020 ORTHO05D008935 2.2e-63 246.9 262 49.6
C06p49960 Brassica napus HOM05D007020 ORTHO05D008935 2.8e-63 246.5 317 46.4
ECA232G4433 Erigeron canadensis HOM05D007020 ORTHO05D008935 2.8e-63 246.5 271 51.7
Cpa.g.sc26.268 Carica papaya HOM05D007020 ORTHO05D008935 3.7e-63 246.1 288 46.9
HanXRQChr05g0146601 Helianthus annuus HOM05D007020 ORTHO05D008935 3.7e-63 246.1 289 50.2
Sc26g0004460 Simmondsia chinensis HOM05D007020 ORTHO05D008935 3.7e-63 246.1 271 50.6
TWI36G0910 Tripterygium wilfordii HOM05D007020 ORTHO05D008935 3.7e-63 246.1 291 47.1
PSO170G4315 Papaver somniferum HOM05D007020 ORTHO05D008935 4.8e-63 245.7 330 44.8
ATR0661G229 Amborella trichopoda HOM05D007020 ORTHO05D008935 8.3e-63 245.0 263 50.2
Lsat_1_v5_gn_0_761 Lactuca sativa HOM05D007020 ORTHO05D008935 8.3e-63 245.0 324 47.8
DCAR_022941 Daucus carota HOM05D007020 ORTHO05D008935 1.1e-62 244.6 267 50.2
Nitab4.5_0003030g0130 Nicotiana tabacum HOM05D007020 ORTHO05D008935 1.1e-62 244.6 271 50.6
SalBow7G4579 Salvia bowleyana HOM05D000001 ORTHO05D009837 1.1e-62 244.6 316 44.3
Zm00001eb272250 Zea mays HOM05D007020 ORTHO05D008935 1.1e-62 244.6 320 46.2
CDE02G2299 Ceratophyllum demersum HOM05D000059 ORTHO05D008935 1.4e-62 244.2 269 49.1
arahy.Tifrunner.gnm1.ann1.W20NI2 Arachis hypogaea HOM05D007020 ORTHO05D008935 1.8e-62 243.8 272 49.6
CAN.G311.66 Capsicum annuum HOM05D007020 ORTHO05D008935 1.8e-62 243.8 265 51.3
ClCG08G014040 Citrullus lanatus HOM05D007020 ORTHO05D008935 1.8e-62 243.8 297 47.1
Psat5g012400 Pisum sativum HOM05D007020 ORTHO05D008935 2.4e-62 243.4 265 49.8
Solyc04g081920.3 Solanum lycopersicum HOM05D007020 ORTHO05D008935 2.4e-62 243.4 271 50.2
arahy.Tifrunner.gnm1.ann1.YGS75T Arachis hypogaea HOM05D007020 ORTHO05D008935 4.1e-62 242.7 273 50.9
PGSC0003DMG400009884 Solanum tuberosum HOM05D007020 ORTHO05D008935 4.1e-62 242.7 271 49.1
SGA_v2.0_scaffold96G28944 Striga asiatica HOM05D007020 ORTHO05D008935 4.1e-62 242.7 309 46.0
CARHR069580 Cardamine hirsuta HOM05D007020 ORTHO05D008935 9.1e-62 241.5 267 49.4
Medtr3g114540 Medicago truncatula HOM05D007020 ORTHO05D008935 9.1e-62 241.5 291 45.4
GSVIVG01008746001 Vitis vinifera HOM05D007020 ORTHO05D008935 9.1e-62 241.5 270 49.6
Eucgr.F03712 Eucalyptus grandis HOM05D007020 ORTHO05D008935 1.2e-61 241.1 263 50.6
AT1G76050 Arabidopsis thaliana HOM05D007020 ORTHO05D008935 1.6e-61 240.7 267 49.1
A07p41540 Brassica napus HOM05D007020 ORTHO05D008935 1.6e-61 240.7 293 47.1
BraA07t31686Z Brassica rapa HOM05D007020 ORTHO05D008935 1.6e-61 240.7 293 47.1
AUR62013887 Chenopodium quinoa HOM05D007020 ORTHO05D008935 2.0e-61 240.4 304 47.4
Hund05155 Selenicereus undatus HOM05D007020 ORTHO05D008935 2.0e-61 240.4 271 50.2
TPR.G38245 Trifolium pratense HOM05D007020 ORTHO05D008935 2.0e-61 240.4 315 44.1
Ca_15469_v3 Cicer arietinum L. HOM05D007020 ORTHO05D008935 2.7e-61 240.0 264 49.2
Manes.06G014100 Manihot esculenta HOM05D007020 ORTHO05D008935 2.7e-61 240.0 271 48.3
Phvul.009G019500 Phaseolus vulgaris HOM05D007020 ORTHO05D008935 2.7e-61 240.0 263 51.7
Hma1.2p1_1598F.1_g292900 Hydrangea macrophylla HOM05D007020 ORTHO05D008935 3.5e-61 239.6 292 47.3
Aa31LG4G6160 Aethionema arabicum HOM05D000059 ORTHO05D000128 4.5e-61 239.2 292 46.9
Aqoxy6G02012 Aquilegia oxysepala HOM05D007020 ORTHO05D008935 4.5e-61 239.2 255 50.6
BcaC08g47097 Brassica carinata HOM05D007020 ORTHO05D008935 7.7e-61 238.4 318 44.0
Peaxi162Scf00174g00717 Petunia axillaris HOM05D007020 ORTHO05D008935 7.7e-61 238.4 270 49.6
COL.COLO4_26091 Corchorus olitorius HOM05D007020 ORTHO05D008935 2.9e-60 236.5 293 49.1
Glyma.04G020900 Glycine max HOM05D007020 ORTHO05D008935 6.5e-60 235.3 264 50.0
AL2G36070 Arabidopsis lyrata HOM05D007020 ORTHO05D008935 8.5e-60 235.0 267 49.1
Ah.11g040270 Amaranthus hybridus HOM05D007020 ORTHO05D008935 1.2e-58 231.1 270 50.4
EL10Ac1g02092 Beta vulgaris HOM05D007020 ORTHO05D008935 1.7e-55 220.7 281 46.6
Oeu014023.1 Olea europaea HOM05D007020 ORTHO05D008935 5.4e-54 215.7 341 40.2
VMungo1309G1583 Vigna mungo HOM05D007020 ORTHO05D008935 7.0e-54 215.3 330 41.5
CBR_g29446 Chara braunii HOM05D007020 ORTHO05D008935 2.9e-52 209.9 303 41.6
MBI17_g14568_MAGBIO Magnolia biondii HOM05D007020 ORTHO05D008935 9.5e-51 204.9 329 40.1
Cre02.g078750 Chlamydomonas reinhardtii HOM05D007020 ORTHO05D008935 2.1e-50 203.8 277 44.4
SHI08019 Sapria himalayana HOM05D007020 ORTHO05D008935 1.0e-49 201.4 294 41.8
PRCOL_00000246 Prasinoderma coloniale HOM05D007020 ORTHO05D008935 1.8e-49 200.7 299 43.8
SGA_v2.0_scaffold173G39193 Striga asiatica HOM05D003133 ORTHO05D003642 8.9e-49 198.4 302 42.1
AUR62036707 Chenopodium quinoa HOM05D007020 ORTHO05D008935 4.4e-48 196.1 195 52.3
HPP92_004932 Vanilla planifolia HOM05D007020 ORTHO05D008935 3.7e-47 193.0 212 48.6
Sopen04g035560 Solanum pennellii HOM05D007020 ORTHO05D008935 1.5e-43 181.0 199 50.8
MCO01G778 Micromonas commoda HOM05D007020 ORTHO05D008935 8.0e-42 175.3 242 42.1
Actinidia17018 Actinidia chinensis HOM05D007020 ORTHO05D008935 3.7e-39 166.4 247 43.3
Pp3s46_330 Physcomitrium patens HOM05D007020 ORTHO05D008935 1.5e-35 154.5 243 35.8
CSS0023482 Camellia sinensis var. sinensis HOM05D007020 ORTHO05D008935 2.0e-24 117.5 236 35.6
Nn3g20659 Nelumbo nucifera HOM05D007020 ORTHO05D008935 3.4e-24 116.7 120 50.8
SMO169G0279 Selaginella moellendorffii HOM05D007020 ORTHO05D008935 1.1e-19 101.7 126 46.8
Thecc.08G050800 Theobroma cacao HOM05D007020 ORTHO05D008935 8.1e-18 95.5 100 48.0
PRCOL_00005352 Prasinoderma coloniale HOM05D007020 ORTHO05D008935 1.9e-14 84.3 174 32.8
Glyma.06G021100 Glycine max HOM05D007020 ORTHO05D008935 3.6e-10 70.1 85 42.4
MCO04G266 Micromonas commoda HOM05D007020 ORTHO05D008102 1.2e-08 65.1 144 28.5
SMO169G0259 Selaginella moellendorffii HOM05D007020 ORTHO05D008935 1.2e-08 65.1 69 49.3
Glyma.06G021150 Glycine max HOM05D007020 ORTHO05D008935 2.0e-08 64.3 100 40.0
MCO11G777 Micromonas commoda HOM05D007020 ORTHO05D008935 9.9e-08 62.0 147 31.3
AUR62036706 Chenopodium quinoa HOM05D007020 ORTHO05D000002 2.4e-06 57.4 76 44.7
Cfa023901 Carpinus fangiana HOM05D005705 ORTHO05D007152 3.2e-06 57.0 228 25.4
Hma1.2p1_1598F.1_g292910 Hydrangea macrophylla HOM05D007020 ORTHO05D008935 4.2e-06 56.6 50 60.0
MCO15G029 Micromonas commoda HOM05D007020 ORTHO05D008102 5.4e-06 56.2 194 25.3


User provided reference genes

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