Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0075s0015 Marchantia polymorpha HOM05D005824 ORTHO05D007029 0.0e+00 1492.6 837 100.0
arahy.Tifrunner.gnm1.ann1.S86EGP Arachis hypogaea HOM05D005824 ORTHO05D007029 1.4e-74 285.4 758 30.3
arahy.Tifrunner.gnm1.ann1.E5V6X9 Arachis hypogaea HOM05D005824 ORTHO05D007029 4.1e-74 283.9 754 29.6
CSS0029355 Camellia sinensis var. sinensis HOM05D005824 ORTHO05D007029 4.1e-74 283.9 736 31.1
GSVIVG01031305001 Vitis vinifera HOM05D005824 ORTHO05D007029 1.2e-73 282.3 727 31.1
MBI19_g32704_MAGBIO Magnolia biondii HOM05D005824 ORTHO05D007029 1.5e-73 282.0 738 31.2
Lj3g0001001 Lotus japonicus HOM05D005824 ORTHO05D007029 3.4e-73 280.8 746 29.8
SalBow7G3942 Salvia bowleyana HOM05D005824 ORTHO05D007029 3.4e-73 280.8 710 30.7
Lj5g0026124 Lotus japonicus HOM05D005824 ORTHO05D007029 7.7e-73 279.6 747 30.5
Rhsim11G0099700 Rhododendron simsii HOM05D005824 ORTHO05D007029 2.2e-72 278.1 717 33.6
SGA_v2.0_scaffold33G13450 Striga asiatica HOM05D005824 ORTHO05D007029 3.8e-72 277.3 718 36.1
Gohir.A03G155800 Gossypium hirsutum HOM05D005824 ORTHO05D007029 8.5e-72 276.2 728 30.9
Lalb_Chr02g0154321 Lupinus albus HOM05D005824 ORTHO05D007029 8.5e-72 276.2 750 29.7
Gorai.005G200700 Gossypium raimondii HOM05D005824 ORTHO05D007029 7.2e-71 273.1 732 30.3
VMungo0720G2244 Vigna mungo HOM05D005824 ORTHO05D007029 7.2e-71 273.1 727 29.8
Medtr1g055080 Medicago truncatula HOM05D005824 ORTHO05D007029 1.2e-70 272.3 726 30.3
Pp3c6_10400 Physcomitrium patens HOM05D005824 ORTHO05D007029 4.6e-70 270.4 894 30.1
ECA247G2466 Erigeron canadensis HOM05D005824 ORTHO05D007029 1.4e-69 268.9 720 31.0
CANSAT54G1845 Cannabis sativa HOM05D005824 ORTHO05D007029 2.3e-69 268.1 742 29.0
Sopen01g044470 Solanum pennellii HOM05D005824 ORTHO05D007029 3.0e-69 267.7 726 30.3
Psat6g118640 Pisum sativum HOM05D005824 ORTHO05D007029 3.9e-69 267.3 733 28.9
Dinv24497 Davidia involucrata HOM05D005824 ORTHO05D007029 5.1e-69 266.9 713 29.7
Glyma.02G192500 Glycine max HOM05D005824 ORTHO05D007029 1.5e-68 265.4 722 29.5
QL07p026733 Quercus lobata HOM05D005824 ORTHO05D007029 2.0e-68 265.0 722 29.4
MSTRG.15631 Avicennia marina HOM05D005824 ORTHO05D007029 3.3e-68 264.2 715 30.6
THA.LOC104821746 Tarenaya hassleriana HOM05D005824 ORTHO05D007029 5.7e-68 263.5 748 29.0
Glyma.10G084300 Glycine max HOM05D005824 ORTHO05D007029 7.4e-68 263.1 730 29.3
Migut.B00860 Erythranthe guttata HOM05D005824 ORTHO05D007029 9.7e-68 262.7 721 29.4
Nitab4.5_0009690g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 9.7e-68 262.7 719 31.2
SMO203G0090 Selaginella moellendorffii HOM05D005824 ORTHO05D007029 1.7e-67 261.9 848 28.3
Potri.015G010900 Populus trichocarpa HOM05D005824 ORTHO05D007029 2.2e-67 261.5 735 29.3
Sc09g0002470 Simmondsia chinensis HOM05D005824 ORTHO05D007029 2.2e-67 261.5 730 30.1
PGSC0003DMG400018251 Solanum tuberosum HOM05D005824 ORTHO05D007029 2.8e-67 261.2 724 31.2
Sabra15G0009000 Salix brachista HOM05D005824 ORTHO05D007029 3.7e-67 260.8 752 29.4
TPR.G12910 Trifolium pratense HOM05D005824 ORTHO05D007029 4.8e-67 260.4 735 28.8
CAN.G1374.10 Capsicum annuum HOM05D005824 ORTHO05D007029 2.4e-66 258.1 713 31.6
TPR.G21237 Trifolium pratense HOM05D005824 ORTHO05D007029 4.1e-66 257.3 752 28.7
ClCG07G011770 Citrullus lanatus HOM05D005824 ORTHO05D007029 9.1e-66 256.1 720 29.0
COL.COLO4_11087 Corchorus olitorius HOM05D005824 ORTHO05D007029 1.2e-65 255.8 715 28.3
Nn2g14227 Nelumbo nucifera HOM05D005824 ORTHO05D007029 1.2e-65 255.8 734 31.1
Ca_11665_v3 Cicer arietinum L. HOM05D005824 ORTHO05D007029 2.0e-65 255.0 711 29.1
PSO339G3868 Papaver somniferum HOM05D005824 ORTHO05D007029 2.0e-65 255.0 736 29.3
Aa31LG11G9880 Aethionema arabicum HOM05D005824 ORTHO05D007029 7.7e-65 253.1 728 28.7
Cc02_g35570 Coffea canephora HOM05D005824 ORTHO05D007029 7.7e-65 253.1 780 28.5
Thecc.09G352900 Theobroma cacao HOM05D005824 ORTHO05D007029 7.7e-65 253.1 739 29.6
CiPaw.10G020000 Carya illinoinensis HOM05D005824 ORTHO05D007029 1.3e-64 252.3 724 29.0
TAR362G0448 Trochodendron aralioides HOM05D005824 ORTHO05D007029 1.7e-64 251.9 727 34.0
PSO384G0570 Papaver somniferum HOM05D005824 ORTHO05D007029 2.2e-64 251.5 716 29.9
Gohir.D02G178900 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.1e-63 249.2 736 28.7
CsaV3_4G002430 Cucumis sativus L. HOM05D005824 ORTHO05D007029 1.4e-63 248.8 720 29.0
PSO017G5895 Papaver somniferum HOM05D005824 ORTHO05D007029 1.4e-63 248.8 719 29.5
Oeu061927.1 Olea europaea HOM05D005824 ORTHO05D007029 3.2e-63 247.7 761 28.4
Manes.06G027100 Manihot esculenta HOM05D005824 ORTHO05D007029 4.2e-63 247.3 719 28.8
Hund21844 Selenicereus undatus HOM05D005824 ORTHO05D007029 1.2e-62 245.7 799 28.5
Eucgr.B01798 Eucalyptus grandis HOM05D005824 ORTHO05D007029 2.1e-62 245.0 729 28.3
Sed0007659 Sechium edule HOM05D005824 ORTHO05D007029 3.6e-62 244.2 722 28.7
Atru.chr12.1601 Acer truncatum HOM05D005824 ORTHO05D007029 6.1e-62 243.4 718 29.2
Cpa.g.sc48.209 Carica papaya HOM05D005824 ORTHO05D007029 1.8e-61 241.9 731 28.2
PSO063G2449 Papaver somniferum HOM05D005824 ORTHO05D007029 1.8e-61 241.9 710 28.6
Carub.0006s2449 Capsella rubella HOM05D005824 ORTHO05D007029 2.3e-61 241.5 787 27.3
MELO3C017799.2 Cucumis melo HOM05D005824 ORTHO05D007029 3.0e-61 241.1 716 28.4
MD04G1189300 Malus domestica HOM05D005824 ORTHO05D007029 5.1e-61 240.4 742 27.6
ATR0693G066 Amborella trichopoda HOM05D005824 ORTHO05D007029 8.8e-61 239.6 705 30.4
Cfa020078 Carpinus fangiana HOM05D005824 ORTHO05D007029 1.1e-60 239.2 725 32.0
Aqoxy2G02580 Aquilegia oxysepala HOM05D005824 ORTHO05D007029 3.3e-60 237.7 718 28.3
MD12G1202100 Malus domestica HOM05D005824 ORTHO05D007029 3.3e-60 237.7 745 28.1
Thhalv10003721m.g Eutrema salsugineum HOM05D005824 ORTHO05D007029 9.7e-60 236.1 744 28.5
vmacro01596 Vaccinium macrocarpon HOM05D005824 ORTHO05D007029 1.7e-59 235.3 712 28.1
TWI38G0226 Tripterygium wilfordii HOM05D005824 ORTHO05D007029 2.8e-59 234.6 738 29.3
AUR62006798 Chenopodium quinoa HOM05D005824 ORTHO05D007029 8.2e-59 233.0 770 27.1
Lj5A322T66 Lonicera japonica HOM05D005824 ORTHO05D007029 8.2e-59 233.0 697 29.6
Duzib168G0004 Durio zibethinus HOM05D005824 ORTHO05D007029 1.4e-58 232.3 714 27.6
Phvul.007G265900 Phaseolus vulgaris HOM05D005824 ORTHO05D007029 5.3e-58 230.3 730 27.3
Prupe.6G306900 Prunus persica HOM05D005824 ORTHO05D007029 5.3e-58 230.3 744 27.6
Duzib150G0567 Durio zibethinus HOM05D005824 ORTHO05D007029 1.2e-57 229.2 765 27.3
RcHm_v2.0_Chr3g0458051 Rosa chinensis HOM05D005824 ORTHO05D007029 1.2e-57 229.2 750 28.0
FvH4_6g08180 Fragaria vesca HOM05D005824 ORTHO05D007029 1.5e-57 228.8 759 27.5
Sp2g21220 Schrenkiella parvula HOM05D005824 ORTHO05D007029 1.5e-57 228.8 732 29.5
EL10Ac4g09532 Beta vulgaris HOM05D005824 ORTHO05D007029 3.5e-57 227.6 749 28.6
FAN14G3202 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.5e-57 227.6 759 27.4
FAN09G3961 Fragaria x ananassa HOM05D005824 ORTHO05D007029 5.9e-57 226.9 758 27.3
AUR62000450 Chenopodium quinoa HOM05D005824 ORTHO05D007029 1.7e-56 225.3 775 27.9
DCAR_005271 Daucus carota HOM05D005824 ORTHO05D007029 2.2e-56 224.9 741 30.5
AT5G26760 Arabidopsis thaliana HOM05D005824 ORTHO05D007029 8.5e-56 223.0 776 27.4
unitig_748.g6998 Utricularia gibba HOM05D005824 ORTHO05D000260 8.5e-56 223.0 700 28.4
CARHR186810 Cardamine hirsuta HOM05D005824 ORTHO05D007029 2.5e-55 221.5 758 28.0
Peaxi162Scf00357g00429 Petunia axillaris HOM05D005824 ORTHO05D007029 9.4e-55 219.5 686 28.0
CDE01G0540 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 3.0e-53 214.5 762 27.2
Os05g0134300 Oryza sativa ssp. japonica HOM05D005824 ORTHO05D007029 1.7e-51 208.8 720 28.6
C02p58640 Brassica napus HOM05D005824 ORTHO05D007029 3.7e-51 207.6 836 25.8
AL6G38630 Arabidopsis lyrata HOM05D005824 ORTHO05D007029 2.4e-50 204.9 844 25.6
BolC2t11924H Brassica oleracea HOM05D005824 ORTHO05D007029 3.1e-50 204.5 838 25.8
Lsat_1_v5_gn_9_78801 Lactuca sativa HOM05D005824 ORTHO05D007029 3.1e-50 204.5 680 28.7
Haze_20113 Corylus avellana HOM05D005824 ORTHO05D007029 7.0e-50 203.4 791 29.1
Hma1.2p1_1243F.1_g269980 Hydrangea macrophylla HOM05D005824 ORTHO05D007029 9.1e-50 203.0 631 28.8
AagrBONN_evm.TU.Sc2ySwM_117.2728 Anthoceros agrestis HOM05D005824 ORTHO05D007029 3.5e-49 201.1 791 30.2
FAN05G5613 Fragaria x ananassa HOM05D005824 ORTHO05D007029 3.5e-49 201.1 721 27.5
Nitab4.5_0000185g0360 Nicotiana tabacum HOM05D005824 ORTHO05D007029 2.2e-48 198.4 734 27.8
HanXRQChr12g0362901 Helianthus annuus HOM05D005824 ORTHO05D007029 3.8e-48 197.6 716 26.3
BraA02t08872Z Brassica rapa HOM05D005824 ORTHO05D007029 3.2e-47 194.5 853 25.7
A02p39030 Brassica napus HOM05D005824 ORTHO05D007029 7.2e-47 193.4 841 25.0
CBR_g20185 Chara braunii HOM05D005824 ORTHO05D007029 7.2e-47 193.4 316 37.7
Ciclev10011677m.g Citrus clementina HOM05D005824 ORTHO05D007029 1.2e-46 192.6 298 38.6
FAN02G4519 Fragaria x ananassa HOM05D005824 ORTHO05D007029 1.2e-44 186.0 747 26.6
Ah.10g027060 Amaranthus hybridus HOM05D005824 ORTHO05D007029 4.8e-43 180.6 788 24.7
Zm00001eb354720 Zea mays HOM05D005824 ORTHO05D007029 7.7e-41 173.3 633 28.6
SEGI_20129 Sequoiadendron giganteum HOM05D005824 ORTHO05D007029 4.2e-39 167.5 264 39.0
BcaNung06222 Brassica carinata HOM05D005824 ORTHO05D007029 2.3e-37 161.8 817 24.7
HPP92_021934 Vanilla planifolia HOM05D005824 ORTHO05D007029 1.8e-34 152.1 279 35.5
Nitab4.5_0002783g0020 Nicotiana tabacum HOM05D005824 ORTHO05D007029 6.6e-32 143.7 716 24.9
Nitab4.5_0000185g0370 Nicotiana tabacum HOM05D005824 ORTHO05D007029 1.5e-28 132.5 172 37.2
Solyc01g101010.4 Solanum lycopersicum HOM05D005824 ORTHO05D007029 2.0e-28 132.1 178 42.1
BolC7t44682H Brassica oleracea HOM05D005824 ORTHO05D007029 7.5e-28 130.2 727 23.5
PGR083G1123 Punica granatum HOM05D005824 ORTHO05D007029 2.8e-27 128.3 569 26.2
SGA_v2.0_scaffold438G51629 Striga asiatica HOM05D005824 ORTHO05D007029 2.8e-27 128.3 180 41.7
C07p41490 Brassica napus HOM05D005824 ORTHO05D007029 3.2e-26 124.8 728 22.8
BcaNung03676 Brassica carinata HOM05D005824 ORTHO05D007029 1.2e-25 122.9 306 29.4
Actinidia35501 Actinidia chinensis HOM05D005824 ORTHO05D007029 1.2e-22 112.8 174 39.1
A06p36990 Brassica napus HOM05D005824 ORTHO05D007029 4.7e-22 110.9 206 32.5
BraA06t26625Z Brassica rapa HOM05D005824 ORTHO05D007029 4.7e-22 110.9 206 32.5
Gohir.A08G201701 Gossypium hirsutum HOM05D005824 ORTHO05D007029 1.9e-18 99.0 664 25.0
HPP92_021933 Vanilla planifolia HOM05D005824 ORTHO05D007029 9.2e-18 96.7 175 31.4
Oeu060660.1 Olea europaea HOM05D005824 ORTHO05D007029 2.8e-14 85.1 105 41.0
Zm00001eb056090 Zea mays HOM05D000739 ORTHO05D007029 1.1e-13 83.2 113 41.6
Zm00001eb289330 Zea mays HOM05D005824 ORTHO05D007029 2.0e-12 79.0 98 43.9
Dinv30929 Davidia involucrata HOM05D005824 ORTHO05D007029 9.2e-10 70.1 144 33.3
Cfa020079 Carpinus fangiana HOM05D005824 ORTHO05D007029 2.3e-08 65.5 82 36.6
CDE12G0845 Ceratophyllum demersum HOM05D005824 ORTHO05D007029 3.9e-08 64.7 130 32.3


User provided reference genes

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