Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0069s0010 Marchantia polymorpha HOM05D006375 ORTHO05D008188 0.0e+00 2145.2 1123 100.0
Pp3c22_7360 Physcomitrium patens HOM05D006375 ORTHO05D008188 8.7e-173 612.1 1160 39.0
SEGI_37856 Sequoiadendron giganteum HOM05D006375 ORTHO05D008188 1.6e-166 591.3 1089 37.9
AagrBONN_evm.TU.Sc2ySwM_340.97 Anthoceros agrestis HOM05D006375 ORTHO05D008188 2.6e-153 547.4 904 41.2
Actinidia06495 Actinidia chinensis HOM05D006375 ORTHO05D008188 2.5e-151 540.8 976 39.3
CSS0034734 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 2.1e-150 537.7 951 39.4
Rhsim10G0177200 Rhododendron simsii HOM05D006375 ORTHO05D008188 9.7e-148 528.9 967 38.5
SMO139G0070 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 9.7e-148 528.9 1083 35.5
EL10Ac6g15274 Beta vulgaris HOM05D006375 ORTHO05D008188 1.7e-147 528.1 946 38.1
Hma1.2p1_0158F.1_g070200 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 1.4e-146 525.0 973 37.5
Nn3g18305 Nelumbo nucifera HOM05D006375 ORTHO05D008188 1.4e-146 525.0 974 37.4
ATR0564G422 Amborella trichopoda HOM05D006375 ORTHO05D008188 1.6e-145 521.5 971 38.9
Hund04476 Selenicereus undatus HOM05D006375 ORTHO05D008188 7.7e-145 519.2 935 38.4
SMO157G0011 Selaginella moellendorffii HOM05D006375 ORTHO05D008188 1.0e-144 518.8 1095 35.1
QL02p058134 Quercus lobata HOM05D006375 ORTHO05D008188 2.2e-144 517.7 946 38.4
Thecc.04G114800 Theobroma cacao HOM05D006375 ORTHO05D008188 1.9e-143 514.6 974 38.1
SalBow3G0693 Salvia bowleyana HOM05D006375 ORTHO05D008188 1.6e-142 511.5 978 37.3
ECA238G1164 Erigeron canadensis HOM05D006375 ORTHO05D008188 2.1e-142 511.1 978 37.2
Lj4C263T11 Lonicera japonica HOM05D006375 ORTHO05D008188 2.7e-142 510.8 1117 34.5
HanXRQChr14g0444701 Helianthus annuus HOM05D006375 ORTHO05D008188 4.7e-142 510.0 1109 34.6
Sc14g0006560 Simmondsia chinensis HOM05D006375 ORTHO05D008188 6.1e-142 509.6 973 38.0
Nitab4.5_0010112g0040 Nicotiana tabacum HOM05D006375 ORTHO05D008188 8.0e-142 509.2 1149 35.6
QL93p0100_0515 Quercus lobata HOM05D006375 ORTHO05D008188 8.0e-142 509.2 946 37.9
Nitab4.5_0000201g0170 Nicotiana tabacum HOM05D006375 ORTHO05D008188 2.3e-141 507.7 1148 35.7
Cfa007814 Carpinus fangiana HOM05D006375 ORTHO05D008188 4.0e-141 506.9 1156 34.6
TAR374G0480 Trochodendron aralioides HOM05D006375 ORTHO05D008188 1.2e-140 505.4 1106 35.1
CANSAT64G0280 Cannabis sativa HOM05D006375 ORTHO05D008188 4.4e-140 503.4 939 37.3
DCAR_003431 Daucus carota HOM05D006375 ORTHO05D008188 4.4e-140 503.4 976 37.7
Gohir.D07G082900 Gossypium hirsutum HOM05D006375 ORTHO05D008188 7.5e-140 502.7 938 37.2
Potri.004G087400 Populus trichocarpa HOM05D006375 ORTHO05D008188 7.5e-140 502.7 968 37.5
Ciclev10010990m.g Citrus clementina HOM05D006375 ORTHO05D008188 2.2e-139 501.1 1097 35.6
Gohir.A07G078100 Gossypium hirsutum HOM05D006375 ORTHO05D008188 2.2e-139 501.1 943 38.0
MSTRG.2615 Avicennia marina HOM05D006375 ORTHO05D008188 4.8e-139 500.0 971 36.5
PSO478G2715 Papaver somniferum HOM05D006375 ORTHO05D008188 4.8e-139 500.0 980 37.8
Sopen11g005910 Solanum pennellii HOM05D006375 ORTHO05D008188 6.3e-139 499.6 1146 34.6
Solyc11g011150.2 Solanum lycopersicum HOM05D006375 ORTHO05D008188 1.1e-138 498.8 1146 34.3
Gorai.001G088500 Gossypium raimondii HOM05D006375 ORTHO05D008188 1.4e-138 498.4 981 36.9
PGSC0003DMG400015671 Solanum tuberosum HOM05D006375 ORTHO05D008188 1.8e-138 498.0 1147 34.5
Aqoxy3G00081 Aquilegia oxysepala HOM05D006375 ORTHO05D008188 4.1e-138 496.9 1104 33.8
AUR62017915 Chenopodium quinoa HOM05D006375 ORTHO05D008188 7.0e-138 496.1 974 35.8
HPP92_024778 Vanilla planifolia HOM05D006375 ORTHO05D008188 1.6e-137 495.0 1093 34.7
Os08g0427500 Oryza sativa ssp. japonica HOM05D006375 ORTHO05D008188 3.5e-137 493.8 973 36.8
Sed0006511 Sechium edule HOM05D006375 ORTHO05D008188 5.9e-137 493.0 976 35.2
AUR62003604 Chenopodium quinoa HOM05D006375 ORTHO05D008188 7.7e-137 492.7 998 35.6
CsaV3_5G024160 Cucumis sativus L. HOM05D006375 ORTHO05D008188 5.0e-136 490.0 941 36.1
Manes.01G118300 Manihot esculenta HOM05D006375 ORTHO05D008188 8.5e-136 489.2 973 36.2
Haze_14261 Corylus avellana HOM05D006375 ORTHO05D008188 1.9e-135 488.0 1179 34.4
SGA_v2.0_scaffold2G00936 Striga asiatica HOM05D006375 ORTHO05D008188 2.5e-135 487.6 956 36.9
arahy.Tifrunner.gnm1.ann1.WVM8AG Arachis hypogaea HOM05D006375 ORTHO05D008188 1.2e-134 485.3 980 35.6
PSO017G5819 Papaver somniferum HOM05D006375 ORTHO05D008188 2.7e-134 484.2 981 36.3
Atru.chr1.1908 Acer truncatum HOM05D006375 ORTHO05D008188 6.1e-134 483.0 968 35.6
TPR.G8261 Trifolium pratense HOM05D006375 ORTHO05D008188 2.3e-133 481.1 930 36.8
COL.COLO4_05994 Corchorus olitorius HOM05D006375 ORTHO05D008188 6.8e-133 479.6 930 36.7
LjContig00141g0022245 Lotus japonicus HOM05D006375 ORTHO05D008188 6.8e-133 479.6 977 36.2
RcHm_v2.0_Chr3g0493161 Rosa chinensis HOM05D006375 ORTHO05D008188 6.8e-133 479.6 1029 35.0
VMungo0647G2002 Vigna mungo HOM05D006375 ORTHO05D008188 1.2e-132 478.8 961 35.9
FvH4_1g28770 Fragaria vesca HOM05D006375 ORTHO05D008188 1.5e-132 478.4 1103 34.1
arahy.Tifrunner.gnm1.ann1.EH3TRU Arachis hypogaea HOM05D006375 ORTHO05D008188 2.0e-132 478.0 994 35.4
MELO3C022863.2 Cucumis melo HOM05D006375 ORTHO05D008188 5.7e-132 476.5 990 35.3
Lalb_Chr04g0251361 Lupinus albus HOM05D006375 ORTHO05D008188 5.7e-132 476.5 968 36.0
AL6G27600 Arabidopsis lyrata HOM05D006375 ORTHO05D008188 8.3e-131 472.6 985 36.0
CDE05G1980 Ceratophyllum demersum HOM05D006375 ORTHO05D008188 8.3e-131 472.6 962 34.9
MD17G1258300 Malus domestica HOM05D006375 ORTHO05D008188 1.1e-130 472.2 976 35.0
Glyma.14G214000 Glycine max HOM05D006375 ORTHO05D008188 3.1e-130 470.7 966 35.1
Sabra04G0058300 Salix brachista HOM05D006375 ORTHO05D008188 1.6e-129 468.4 1151 32.4
FAN19G0463 Fragaria x ananassa HOM05D006375 ORTHO05D008188 2.0e-129 468.0 1115 33.6
THA.LOC104827188 Tarenaya hassleriana HOM05D006375 ORTHO05D008188 3.5e-129 467.2 934 36.3
Zm00001eb041880 Zea mays HOM05D006375 ORTHO05D008188 7.7e-129 466.1 963 35.3
Medtr5g078360 Medicago truncatula HOM05D006375 ORTHO05D008188 2.3e-128 464.5 1072 33.3
PGR004G2253 Punica granatum HOM05D006375 ORTHO05D008188 3.8e-128 463.8 967 36.1
Migut.H02262 Erythranthe guttata HOM05D006375 ORTHO05D008188 8.6e-128 462.6 883 36.6
GSVIVG01030782001 Vitis vinifera HOM05D006375 ORTHO05D008188 8.6e-128 462.6 973 36.0
AT5G16630 Arabidopsis thaliana HOM05D006375 ORTHO05D008188 1.5e-127 461.8 934 36.0
vmacro07694 Vaccinium macrocarpon HOM05D006375 ORTHO05D008188 1.9e-127 461.5 1117 34.5
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 3.2e-127 460.7 957 34.8
TWI53G2003 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 1.2e-126 458.8 973 34.9
ClCG01G008800 Citrullus lanatus HOM05D006375 ORTHO05D008188 1.4e-125 455.3 965 35.0
CSS0009955 Camellia sinensis var. sinensis HOM05D006375 ORTHO05D008188 2.3e-125 454.5 823 38.9
Phvul.008G233100 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 3.0e-125 454.1 952 33.9
Carub.0006s1484 Capsella rubella HOM05D006375 ORTHO05D008188 8.8e-125 452.6 988 34.4
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 1.5e-124 451.8 926 34.9
Psat2g047400 Pisum sativum HOM05D006375 ORTHO05D008188 2.6e-124 451.1 955 34.9
BraA02t05338Z Brassica rapa HOM05D006375 ORTHO05D008188 4.4e-124 450.3 953 35.4
FAN23G0218 Fragaria x ananassa HOM05D006375 ORTHO05D008188 5.7e-124 449.9 1137 32.4
Thhalv10012651m.g Eutrema salsugineum HOM05D006375 ORTHO05D008188 3.7e-123 447.2 951 35.4
Aa31LG11G13020 Aethionema arabicum HOM05D006375 ORTHO05D008188 1.1e-122 445.7 981 35.0
CBR_g3816 Chara braunii HOM05D006375 ORTHO05D008188 1.4e-122 445.3 1073 32.7
Ah.02g121850 Amaranthus hybridus HOM05D006375 ORTHO05D008188 2.4e-122 444.5 886 36.6
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 2.4e-122 444.5 952 34.5
Hma1.2p1_0158F.1_g070190 Hydrangea macrophylla HOM05D006375 ORTHO05D008188 3.1e-122 444.1 847 37.3
CiPaw.03G071800 Carya illinoinensis HOM05D006375 ORTHO05D008188 5.4e-122 443.4 951 35.9
CARHR196570 Cardamine hirsuta HOM05D006375 ORTHO05D008188 7.0e-122 443.0 949 34.7
MBI19_g34823_MAGBIO Magnolia biondii HOM05D006375 ORTHO05D008188 2.0e-121 441.4 635 44.1
Cc07_g13460 Coffea canephora HOM05D006375 ORTHO05D008188 2.7e-121 441.0 978 33.7
TWI74G0084 Tripterygium wilfordii HOM05D006375 ORTHO05D008188 5.9e-121 439.9 978 33.9
Lsat_1_v5_gn_2_69340 Lactuca sativa HOM05D006375 ORTHO05D008188 1.3e-120 438.7 966 34.0
Cpa.g.sc116.55 Carica papaya HOM05D006375 ORTHO05D008188 1.7e-120 438.3 853 37.3
Sp6g27540 Schrenkiella parvula HOM05D006375 ORTHO05D008188 1.7e-120 438.3 963 34.2
BolC2t06767H Brassica oleracea HOM05D006375 ORTHO05D000255 8.9e-117 426.0 959 33.4
Prupe.3G161000 Prunus persica HOM05D006375 ORTHO05D008188 9.2e-114 416.0 949 34.0
Peaxi162Scf00305g00616 Petunia axillaris HOM05D006375 ORTHO05D008188 1.0e-112 412.5 671 41.4
CAN.G222.25 Capsicum annuum HOM05D006375 ORTHO05D008188 2.3e-112 411.4 987 33.9
Eucgr.F02852 Eucalyptus grandis HOM05D006375 ORTHO05D008188 1.1e-111 409.1 625 40.2
unitig_899.g14571 Utricularia gibba HOM05D006375 ORTHO05D008188 5.6e-111 406.8 810 37.8
Phvul.010G024866 Phaseolus vulgaris HOM05D006375 ORTHO05D008188 3.7e-107 394.0 836 33.7
SHI25352 Sapria himalayana HOM05D006375 ORTHO05D008188 1.0e-104 386.0 688 37.2
Dinv28205 Davidia involucrata HOM05D006375 ORTHO05D008188 4.6e-97 360.5 815 34.7
FAN26G3226 Fragaria x ananassa HOM05D006375 ORTHO05D008188 3.8e-75 287.7 506 36.8
Ca_22495_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 5.1e-56 224.2 444 36.5
PRCOL_00001710 Prasinoderma coloniale HOM05D006375 ORTHO05D008188 1.5e-52 212.6 930 25.5
MCO12G035 Micromonas commoda HOM05D006375 ORTHO05D008188 3.0e-40 171.8 449 28.7
Ca_22493_v3 Cicer arietinum L. HOM05D006375 ORTHO05D008188 1.2e-36 159.8 207 42.0
Cre12.g557400 Chlamydomonas reinhardtii HOM05D006375 ORTHO05D008188 2.0e-36 159.1 313 32.6
Haze_27154 Corylus avellana HOM05D006375 ORTHO05D008188 1.1e-34 153.3 266 33.8
Cfa025272 Carpinus fangiana HOM05D006375 ORTHO05D008188 5.2e-24 117.9 255 30.2
Peaxi162Scf00305g00615 Petunia axillaris HOM05D006375 ORTHO05D008188 3.6e-17 95.1 339 31.0
Cfa024716 Carpinus fangiana HOM05D006375 ORTHO05D008188 7.5e-15 87.4 171 27.5
Nn2g13217 Nelumbo nucifera HOM05D006375 ORTHO05D008188 3.3e-10 72.0 93 46.2
CAN.G222.26 Capsicum annuum HOM05D006375 ORTHO05D008188 2.8e-09 68.9 93 43.0
FAN26G2035 Fragaria x ananassa HOM05D006375 ORTHO05D008188 3.4e-07 62.0 60 48.3
SHI25356 Sapria himalayana HOM05D006375 ORTHO05D008188 3.7e-06 58.5 88 40.9


User provided reference genes

Program Settings