Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.6e-215 753.1 584 100.0
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 1.1e-145 521.2 479 71.6
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 1.8e-108 397.5 497 69.8
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 1.2e-96 358.2 492 66.7
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 2.0e-88 330.9 468 65.4
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 1.5e-78 298.1 328 53.0
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 4.2e-78 296.6 302 56.6
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 4.4e-75 286.6 324 52.2
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 3.7e-74 283.5 485 64.5
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 9.1e-73 278.9 483 64.2
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 2.2e-71 274.2 471 59.9
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 2.2e-71 274.2 483 63.4
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 2.2e-71 274.2 303 53.5
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 2.9e-71 273.9 491 60.1
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 6.5e-71 272.7 483 63.1
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 4.2e-70 270.0 291 55.3
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 1.2e-69 268.5 298 53.0
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 3.6e-69 266.9 271 57.2
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 6.1e-69 266.2 471 61.4
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 6.1e-69 266.2 471 61.4
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 1.4e-68 265.0 471 61.1
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 1.4e-68 265.0 471 61.1
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.8e-68 264.6 294 53.4
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.3e-68 264.2 291 54.3
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 5.2e-68 263.1 268 55.6
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 8.8e-68 262.3 498 58.6
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 1.2e-67 261.9 293 53.2
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.5e-67 261.5 486 61.3
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 2.6e-67 260.8 476 60.7
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 3.4e-67 260.4 472 60.8
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 4.4e-67 260.0 291 53.3
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 4.4e-67 260.0 293 52.6
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 4.4e-67 260.0 470 59.4
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 5.7e-67 259.6 291 53.3
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 1.3e-66 258.5 473 63.0
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 1.7e-66 258.1 271 56.1
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 1.7e-66 258.1 475 59.4
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 1.7e-66 258.1 267 55.1
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 2.8e-66 257.3 293 52.9
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 2.8e-66 257.3 293 52.9
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 3.7e-66 256.9 290 52.4
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 4.8e-66 256.5 278 54.0
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 6.3e-66 256.1 293 52.6
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 8.3e-66 255.8 287 53.7
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.1e-65 255.4 293 52.2
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 1.1e-65 255.4 495 57.8
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.4e-65 255.0 300 52.0
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 1.4e-65 255.0 475 60.0
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 1.8e-65 254.6 272 54.8
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 2.4e-65 254.2 274 53.3
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 5.4e-65 253.1 326 49.1
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 7.0e-65 252.7 291 53.6
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 9.1e-65 252.3 290 51.0
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 9.1e-65 252.3 275 54.9
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 1.2e-64 251.9 293 51.9
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 1.2e-64 251.9 293 51.2
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 1.6e-64 251.5 268 54.9
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 2.7e-64 250.8 471 59.7
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 2.7e-64 250.8 277 54.2
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 3.5e-64 250.4 468 58.3
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 4.5e-64 250.0 289 51.9
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 5.9e-64 249.6 485 57.3
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 7.7e-64 249.2 477 60.0
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 1.0e-63 248.8 496 57.9
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 1.0e-63 248.8 312 52.2
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 1.0e-63 248.8 288 52.4
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 1.3e-63 248.4 278 52.9
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 2.2e-63 247.7 487 57.3
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 2.2e-63 247.7 267 53.9
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 2.2e-63 247.7 291 52.6
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 2.9e-63 247.3 492 58.1
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.9e-63 247.3 271 52.4
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 2.9e-63 247.3 271 52.4
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 8.5e-63 245.7 295 50.8
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 8.5e-63 245.7 269 51.7
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 8.5e-63 245.7 291 51.5
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 1.1e-62 245.4 287 50.9
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 2.5e-62 244.2 289 50.5
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 2.5e-62 244.2 481 58.0
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 2.5e-62 244.2 478 43.5
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 3.2e-62 243.8 288 50.0
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 4.2e-62 243.4 314 52.2
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 5.5e-62 243.0 254 55.1
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 9.4e-62 242.3 487 57.5
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 9.4e-62 242.3 271 52.4
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 9.4e-62 242.3 292 50.7
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 1.2e-61 241.9 489 56.4
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 2.1e-61 241.1 283 51.2
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 2.7e-61 240.7 291 49.1
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 2.7e-61 240.7 296 51.0
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 4.7e-61 240.0 295 49.2
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 1.0e-60 238.8 292 50.3
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 3.0e-60 237.3 258 53.9
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 3.0e-60 237.3 258 53.9
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 4.0e-60 236.9 258 53.9
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 6.8e-60 236.1 274 50.0
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 2.0e-59 234.6 254 53.1
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 2.6e-59 234.2 254 54.3
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 5.7e-59 233.0 289 49.1
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 7.5e-59 232.6 448 59.4
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 2.8e-58 230.7 271 52.0
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 3.7e-58 230.3 290 47.6
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 3.7e-58 230.3 288 50.0
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 3.7e-58 230.3 449 63.7
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 8.3e-58 229.2 299 48.2
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 5.4e-57 226.5 299 47.8
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.2e-56 225.3 448 62.5
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-56 224.9 303 47.5
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 7.7e-56 222.6 296 47.6
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 2.9e-55 220.7 305 46.6
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-54 218.0 269 49.4
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 3.3e-54 217.2 487 54.6
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 7.2e-54 216.1 246 53.7
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.5e-54 215.7 300 47.7
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 1.5e-51 208.4 287 46.7
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 3.4e-51 207.2 244 51.6
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 7.5e-51 206.1 245 50.6
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 1.0e-47 195.7 219 52.1
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 9.5e-46 189.1 463 50.8
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 1.4e-44 185.3 215 54.0
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 1.3e-42 178.7 403 44.7
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 6.4e-42 176.4 355 39.2
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 3.6e-37 160.6 212 46.7
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 4.7e-37 160.2 305 38.7
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 1.5e-35 155.2 161 52.2
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 2.7e-32 144.4 153 53.6
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 6.0e-32 143.3 187 44.9
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 8.6e-31 139.4 200 46.5
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.5e-30 138.7 200 47.0
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-30 138.3 200 47.5
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 1.9e-30 138.3 202 41.6
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.3e-30 137.1 200 47.0
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.3e-30 137.1 200 47.0
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.6e-30 136.7 185 47.6
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 5.6e-30 136.7 184 48.9
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-29 135.6 200 46.5
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.2e-29 135.6 200 46.5
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-29 135.2 185 47.6
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-29 134.8 181 48.1
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-29 134.4 200 45.5
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 3.6e-29 134.0 292 60.6
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.7e-29 133.7 200 46.0
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 8.1e-29 132.9 168 48.2
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 8.1e-29 132.9 166 48.2
RcHm_v2.0_Chr3g0484501 Rosa chinensis HOM05D003639 ORTHO05D004246 1.8e-28 131.7 147 47.6
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.1e-28 131.0 200 45.5
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.1e-28 131.0 185 46.5
AT2G05720 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 8.9e-28 129.4 185 43.2
Cre16.g662800 Chlamydomonas reinhardtii HOM05D003639 ORTHO05D004246 4.4e-27 127.1 218 38.1
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 1.3e-26 125.6 325 37.8
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 2.2e-26 124.8 168 49.4
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 2.9e-26 124.4 229 40.2
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.1e-25 122.5 200 44.5
Atru.chr6.1380 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-22 112.5 260 60.8
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 1.5e-22 112.1 133 54.9
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 1.2e-21 109.0 273 31.5
MELO3C019779.2 Cucumis melo HOM05D003639 ORTHO05D004246 4.0e-20 104.0 196 39.8
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 2.0e-19 101.7 76 69.7
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 7.6e-19 99.8 294 31.6
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.7e-18 98.6 163 44.8
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.9e-17 95.1 200 38.5
RcHm_v2.0_Chr3g0484401 Rosa chinensis HOM05D003639 ORTHO05D004246 3.5e-16 90.9 112 47.3
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 6.2e-13 80.1 74 55.4
Psat4g106880 Pisum sativum HOM05D003639 ORTHO05D004246 8.1e-13 79.7 128 42.2
MELO3C019777.2 Cucumis melo HOM05D003639 ORTHO05D004246 4.9e-10 70.5 66 59.1
COL.COLO4_13929 Corchorus olitorius HOM05D003639 ORTHO05D004246 2.1e-08 65.1 67 47.8
AagrBONN_evm.TU.Sc2ySwM_362.1984 Anthoceros agrestis HOM05D003639 ORTHO05D004246 4.3e-06 57.4 109 43.1


User provided reference genes

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