Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0048s0004 Marchantia polymorpha HOM05D001937 ORTHO05D003828 1.8e-134 482.6 256 100.0
Mapoly0010s0177 Marchantia polymorpha HOM05D001937 ORTHO05D003828 5.4e-54 215.3 271 55.7
Pp3c14_1870 Physcomitrium patens HOM05D001937 ORTHO05D003828 2.5e-43 179.9 272 46.7
Pp3c10_350 Physcomitrium patens HOM05D001937 ORTHO05D003828 1.9e-38 163.7 271 45.0
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 1.8e-36 157.1 268 43.3
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 7.4e-35 151.8 267 43.4
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 5.5e-30 135.6 267 40.1
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 5.5e-30 135.6 267 42.3
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 9.3e-30 134.8 268 39.9
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.5e-29 132.9 267 42.3
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 6.0e-29 132.1 269 41.6
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 7.9e-29 131.7 267 39.0
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 2.3e-28 130.2 266 42.5
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 5.1e-28 129.0 265 42.3
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 1.9e-27 127.1 268 40.3
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 3.3e-27 126.3 268 40.3
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 3.3e-27 126.3 268 40.7
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 1.6e-26 124.0 266 37.6
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 2.1e-26 123.6 269 39.0
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 2.1e-26 123.6 267 39.0
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 2.1e-26 123.6 268 41.4
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 4.8e-26 122.5 268 39.2
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 3.1e-25 119.8 282 38.7
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 4.0e-25 119.4 271 39.1
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 6.9e-25 118.6 267 37.8
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 6.9e-25 118.6 268 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3403 Anthoceros agrestis HOM05D001937 ORTHO05D003828 9.0e-25 118.2 241 42.7
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 2.0e-24 117.1 280 38.9
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 2.6e-24 116.7 266 37.6
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 5.8e-24 115.5 280 38.6
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 7.6e-24 115.2 268 39.6
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 1.7e-23 114.0 267 39.7
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 4.9e-23 112.5 270 36.7
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 6.5e-23 112.1 268 37.3
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 8.4e-23 111.7 267 38.2
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 8.4e-23 111.7 267 39.0
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 8.4e-23 111.7 267 35.6
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.1e-22 111.3 274 37.6
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 1.1e-22 111.3 269 36.4
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 1.1e-22 111.3 267 39.3
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 1.4e-22 110.9 268 39.2
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 1.4e-22 110.9 265 37.7
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 2.5e-22 110.2 268 37.3
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 3.2e-22 109.8 266 36.5
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 3.2e-22 109.8 266 38.7
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 3.2e-22 109.8 271 38.0
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 5.5e-22 109.0 266 37.2
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 5.5e-22 109.0 266 37.2
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 9.3e-22 108.2 266 37.2
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 9.3e-22 108.2 267 36.7
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 1.2e-21 107.8 268 36.2
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 1.2e-21 107.8 266 36.5
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 1.2e-21 107.8 269 36.1
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.1e-21 107.1 266 36.8
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 2.1e-21 107.1 266 36.5
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 3.5e-21 106.3 266 38.3
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.5e-21 106.3 270 37.8
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 4.6e-21 105.9 272 35.3
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 6.0e-21 105.5 266 36.5
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 6.0e-21 105.5 280 37.5
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 7.9e-21 105.1 268 37.7
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 7.9e-21 105.1 266 35.0
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 1.0e-20 104.8 280 34.6
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 2.3e-20 103.6 279 35.8
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 3.0e-20 103.2 266 35.7
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 3.0e-20 103.2 266 35.0
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 3.0e-20 103.2 276 35.9
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.9e-20 102.8 267 37.8
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 3.9e-20 102.8 267 37.8
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 3.9e-20 102.8 273 34.4
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 3.9e-20 102.8 280 35.4
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 5.1e-20 102.4 266 38.3
Medtr5g026660 Medicago truncatula HOM05D001937 ORTHO05D003828 8.7e-20 101.7 284 36.3
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 8.7e-20 101.7 267 35.6
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 1.1e-19 101.3 270 36.7
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 1.5e-19 100.9 267 37.5
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 1.5e-19 100.9 268 36.6
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 1.5e-19 100.9 268 36.6
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 2.5e-19 100.1 268 35.4
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 3.3e-19 99.8 270 36.3
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 3.3e-19 99.8 268 36.2
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 3.3e-19 99.8 278 34.2
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 4.3e-19 99.4 267 36.3
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 5.7e-19 99.0 273 37.0
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 1.6e-18 97.4 273 36.6
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.2e-18 97.1 275 34.2
Zm00001eb386900 Zea mays HOM05D001937 ORTHO05D003828 3.7e-18 96.3 269 34.6
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 6.3e-18 95.5 250 35.6
Dinv15990 Davidia involucrata HOM05D001937 ORTHO05D003828 1.1e-17 94.7 206 39.8
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 2.4e-17 93.6 269 35.7
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 2.4e-17 93.6 258 35.3
SEGI_35630 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 5.3e-17 92.4 117 46.2
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.2e-16 91.3 282 33.0
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 1.5e-16 90.9 266 33.5
Lalb_Chr09g0325221 Lupinus albus HOM05D001937 ORTHO05D003828 2.6e-16 90.1 267 34.1
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 4.5e-16 89.4 267 33.7
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 7.7e-16 88.6 274 32.8
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 2.2e-15 87.0 278 33.5
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 3.8e-15 86.3 259 32.4
Oeu029676.1 Olea europaea HOM05D001937 ORTHO05D003828 8.5e-15 85.1 310 33.2
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 8.5e-15 85.1 260 33.1
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 1.4e-14 84.3 265 34.0
Sed0011905 Sechium edule HOM05D001937 ORTHO05D003828 1.4e-14 84.3 180 39.4
SEGI_20322 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 1.9e-14 84.0 109 55.0
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 7.2e-14 82.0 267 35.2
SGA_v2.0_scaffold83G26356 Striga asiatica HOM05D001937 ORTHO05D003828 9.4e-14 81.6 284 34.5
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 1.2e-13 81.3 259 32.4
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 1.6e-13 80.9 256 34.4
QL11p029100 Quercus lobata HOM05D001937 ORTHO05D003828 2.7e-13 80.1 187 38.0
QL03p060281 Quercus lobata HOM05D001937 ORTHO05D003828 4.6e-13 79.3 185 39.5
QL03p022329 Quercus lobata HOM05D001937 ORTHO05D003828 7.9e-13 78.6 185 38.4
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 2.3e-12 77.0 259 29.3
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 2.3e-12 77.0 259 29.3
QL11p053735 Quercus lobata HOM05D001937 ORTHO05D003828 2.3e-12 77.0 185 37.8
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 2.3e-12 77.0 258 28.3
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.9e-12 76.3 245 35.1
Atru.chr3.3791 Acer truncatum HOM05D001937 ORTHO05D003828 8.8e-12 75.1 110 49.1
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 8.8e-12 75.1 276 33.0
Lalb_Chr05g0215381 Lupinus albus HOM05D001937 ORTHO05D003828 1.1e-11 74.7 267 29.6
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 1.5e-11 74.3 262 29.4
TPR.G17275 Trifolium pratense HOM05D001937 ORTHO05D003828 4.3e-11 72.8 276 29.7
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 5.7e-11 72.4 259 29.7
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 7.4e-11 72.0 339 30.7
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 2.2e-10 70.5 262 28.2
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 2.8e-10 70.1 266 30.1
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 8.2e-10 68.6 261 30.7
Aqoxy3G01594 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 3.1e-09 66.6 220 32.7
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 3.1e-09 66.6 245 31.8
Rhsim05G0102700 Rhododendron simsii HOM05D001937 ORTHO05D009414 6.9e-09 65.5 269 27.5
arahy.Tifrunner.gnm1.ann1.4559ZH Arachis hypogaea HOM05D001937 ORTHO05D003828 1.5e-08 64.3 274 29.9
arahy.Tifrunner.gnm1.ann1.9SH8TS Arachis hypogaea HOM05D001937 ORTHO05D003828 1.5e-08 64.3 274 29.9
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.5e-08 64.3 240 31.2
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 3.4e-08 63.2 240 34.6


User provided reference genes

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