Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0034s0014 Marchantia polymorpha HOM05D005073 ORTHO05D006166 1.3e-180 636.3 332 100.0
Pp3c13_12510 Physcomitrium patens HOM05D005073 ORTHO05D006166 2.6e-93 346.3 268 64.9
Pp3c13_12516 Physcomitrium patens HOM05D005073 ORTHO05D006166 2.6e-93 346.3 268 64.9
CDE03G0055 Ceratophyllum demersum HOM05D005073 ORTHO05D006166 9.4e-91 337.8 329 58.7
SEGI_22824 Sequoiadendron giganteum HOM05D005073 ORTHO05D006166 9.4e-91 337.8 248 68.1
SGA_v2.0_scaffold24G10294 Striga asiatica HOM05D005073 ORTHO05D006166 1.5e-88 330.5 245 69.4
AagrBONN_evm.TU.Sc2ySwM_228.2622 Anthoceros agrestis HOM05D005073 ORTHO05D006166 2.6e-88 329.7 238 68.5
ATR0564G350 Amborella trichopoda HOM05D005073 ORTHO05D006166 4.4e-88 328.9 250 66.0
SGA_v2.0_scaffold48G18021 Striga asiatica HOM05D005073 ORTHO05D006166 1.7e-87 327.0 246 68.7
Eucgr.F02969 Eucalyptus grandis HOM05D005073 ORTHO05D006166 2.2e-87 326.6 273 63.0
CBR_g9146 Chara braunii HOM05D005073 ORTHO05D006166 1.1e-86 324.3 246 63.4
HanXRQChr10g0278501 Helianthus annuus HOM05D005073 ORTHO05D006166 1.1e-86 324.3 300 57.0
Atru.chr13.1265 Acer truncatum HOM05D005073 ORTHO05D006166 3.1e-86 322.8 324 56.2
Os08g0407000 Oryza sativa ssp. japonica HOM05D005073 ORTHO05D006166 4.1e-86 322.4 245 67.3
FvH4_5g38010 Fragaria vesca HOM05D005073 ORTHO05D006166 7.0e-86 321.6 246 66.7
arahy.Tifrunner.gnm1.ann1.T10PLA Arachis hypogaea HOM05D005073 ORTHO05D006166 1.2e-85 320.9 245 66.9
Oeu024557.1 Olea europaea HOM05D005073 ORTHO05D006166 1.2e-85 320.9 254 65.7
Prupe.1G511900 Prunus persica HOM05D005073 ORTHO05D006166 1.6e-85 320.5 247 66.8
CANSAT54G2794 Cannabis sativa HOM05D005073 ORTHO05D006166 2.0e-85 320.1 268 64.6
C06p51930 Brassica napus HOM05D005073 ORTHO05D006166 3.5e-85 319.3 300 57.7
Gorai.009G239900 Gossypium raimondii HOM05D005073 ORTHO05D006166 3.5e-85 319.3 337 54.0
AT1G78010 Arabidopsis thaliana HOM05D005073 ORTHO05D006166 4.5e-85 318.9 249 65.9
ECA246G0226 Erigeron canadensis HOM05D005073 ORTHO05D006166 4.5e-85 318.9 246 65.4
Gohir.D05G231700 Gossypium hirsutum HOM05D005073 ORTHO05D006166 4.5e-85 318.9 337 54.0
RcHm_v2.0_Chr7g0239951 Rosa chinensis HOM05D005073 ORTHO05D006166 4.5e-85 318.9 306 58.2
THA.LOC104810083 Tarenaya hassleriana HOM05D005073 ORTHO05D006166 4.5e-85 318.9 294 58.8
TAR381G0980 Trochodendron aralioides HOM05D005073 ORTHO05D006166 4.5e-85 318.9 258 64.3
Gohir.A05G229400 Gossypium hirsutum HOM05D005073 ORTHO05D006166 5.9e-85 318.5 337 54.6
Actinidia30750 Actinidia chinensis HOM05D005073 ORTHO05D006166 7.7e-85 318.2 248 66.5
Carub.0002s2490 Capsella rubella HOM05D005073 ORTHO05D006166 7.7e-85 318.2 247 66.0
Haze_00571 Corylus avellana HOM05D005073 ORTHO05D006166 7.7e-85 318.2 251 66.9
FAN13G1954 Fragaria x ananassa HOM05D005073 ORTHO05D006166 1.0e-84 317.8 293 60.1
GSVIVG01008990001 Vitis vinifera HOM05D005073 ORTHO05D006166 1.0e-84 317.8 272 61.8
FAN08G1532 Fragaria x ananassa HOM05D005073 ORTHO05D006166 1.3e-84 317.4 246 66.3
A07p43250 Brassica napus HOM05D005073 ORTHO05D006166 1.7e-84 317.0 303 56.4
CSS0031049 Camellia sinensis var. sinensis HOM05D005073 ORTHO05D006166 1.7e-84 317.0 255 65.1
SalBow7G0210 Salvia bowleyana HOM05D005073 ORTHO05D006166 1.7e-84 317.0 294 58.2
Aa31LG4G8070 Aethionema arabicum HOM05D005073 ORTHO05D006166 2.2e-84 316.6 281 60.1
FAN04G2698 Fragaria x ananassa HOM05D005073 ORTHO05D006166 2.2e-84 316.6 246 65.4
Nitab4.5_0000469g0190 Nicotiana tabacum HOM05D005073 ORTHO05D006166 2.9e-84 316.2 247 65.2
TPR.G34614 Trifolium pratense HOM05D005073 ORTHO05D006166 2.9e-84 316.2 245 66.9
Thhalv10018349m.g Eutrema salsugineum HOM05D005073 ORTHO05D006166 3.8e-84 315.8 253 65.2
CSS0000538 Camellia sinensis var. sinensis HOM05D005073 ORTHO05D006166 5.0e-84 315.5 245 66.9
Duzib041G0650 Durio zibethinus HOM05D005073 ORTHO05D006166 6.5e-84 315.1 276 60.9
Phvul.009G028601 Phaseolus vulgaris HOM05D005073 ORTHO05D006166 6.5e-84 315.1 243 67.5
AL2G38280 Arabidopsis lyrata HOM05D005073 ORTHO05D006166 8.5e-84 314.7 316 56.3
Dinv44743 Davidia involucrata HOM05D005073 ORTHO05D006166 1.1e-83 314.3 245 65.3
VMungo1309G2662 Vigna mungo HOM05D005073 ORTHO05D006166 1.1e-83 314.3 271 63.5
CARHR071470 Cardamine hirsuta HOM05D005073 ORTHO05D006166 1.5e-83 313.9 252 63.9
Aqoxy1G01853 Aquilegia oxysepala HOM05D005073 ORTHO05D006166 1.9e-83 313.5 254 64.6
Hma1.2p1_0120F.1_g057030 Hydrangea macrophylla HOM05D005073 ORTHO05D006166 1.9e-83 313.5 248 65.3
MD08G1177300 Malus domestica HOM05D005073 ORTHO05D006166 1.9e-83 313.5 298 57.4
Manes.18G070400 Manihot esculenta HOM05D005073 ORTHO05D006166 1.9e-83 313.5 275 61.5
Sopen04g028940 Solanum pennellii HOM05D005073 ORTHO05D006166 1.9e-83 313.5 341 52.5
unitig_0.g2069 Utricularia gibba HOM05D005073 ORTHO05D006166 1.9e-83 313.5 246 67.1
Glyma.04G105000 Glycine max HOM05D005073 ORTHO05D006166 2.5e-83 313.2 329 55.3
Thecc.08G112000 Theobroma cacao HOM05D005073 ORTHO05D006166 3.2e-83 312.8 289 59.5
Glyma.06G106000 Glycine max HOM05D005073 ORTHO05D006166 4.2e-83 312.4 289 59.9
CAN.G517.17 Capsicum annuum HOM05D005073 ORTHO05D006166 5.5e-83 312.0 245 65.3
Cpa.g.sc66.92 Carica papaya HOM05D005073 ORTHO05D006166 5.5e-83 312.0 254 64.6
Psat5g137200 Pisum sativum HOM05D005073 ORTHO05D006166 5.5e-83 312.0 267 61.8
Atru.BG.242.p Acer truncatum HOM05D005073 ORTHO05D006166 7.2e-83 311.6 249 65.9
CiPaw.05G232900 Carya illinoinensis HOM05D005073 ORTHO05D006166 7.2e-83 311.6 297 57.9
Lj1g0017290 Lotus japonicus HOM05D005073 ORTHO05D006166 7.2e-83 311.6 304 57.9
PGSC0003DMG400009470 Solanum tuberosum HOM05D005073 ORTHO05D006166 9.4e-83 311.2 337 53.1
Medtr3g073790 Medicago truncatula HOM05D005073 ORTHO05D006166 1.2e-82 310.8 328 53.0
Sabra02G0073100 Salix brachista HOM05D005073 ORTHO05D006166 1.2e-82 310.8 293 57.7
Migut.C00179 Erythranthe guttata HOM05D005073 ORTHO05D006166 1.6e-82 310.5 295 58.6
Nitab4.5_0009824g0010 Nicotiana tabacum HOM05D005073 ORTHO05D006166 1.6e-82 310.5 314 53.8
Peaxi162Scf00310g00019 Petunia axillaris HOM05D005073 ORTHO05D006166 1.6e-82 310.5 247 65.2
HPP92_016434 Vanilla planifolia HOM05D005073 ORTHO05D006166 1.6e-82 310.5 260 59.6
Cc10_g05860 Coffea canephora HOM05D005073 ORTHO05D006166 2.1e-82 310.1 309 55.0
CsaV3_5G023620 Cucumis sativus L. HOM05D005073 ORTHO05D006166 2.1e-82 310.1 249 64.3
Sed0012840 Sechium edule HOM05D005073 ORTHO05D006166 2.7e-82 309.7 300 57.3
Nn1g05274 Nelumbo nucifera HOM05D005073 ORTHO05D006166 3.6e-82 309.3 248 64.1
Ca_15226_v3 Cicer arietinum L. HOM05D005073 ORTHO05D006166 4.7e-82 308.9 292 58.6
Sp5g33150 Schrenkiella parvula HOM05D005073 ORTHO05D006166 4.7e-82 308.9 327 55.4
Lalb_Chr23g0270691 Lupinus albus HOM05D005073 ORTHO05D006166 6.1e-82 308.5 283 58.7
Potri.002G092600 Populus trichocarpa HOM05D005073 ORTHO05D006166 6.1e-82 308.5 290 58.3
HPP92_016476 Vanilla planifolia HOM05D005073 ORTHO05D006166 8.0e-82 308.1 281 56.9
SMO137G0212 Selaginella moellendorffii HOM05D005073 ORTHO05D006166 1.0e-81 307.8 252 62.7
MELO3C022795.2 Cucumis melo HOM05D005073 ORTHO05D006166 1.4e-81 307.4 271 60.1
FAN18G0258 Fragaria x ananassa HOM05D005073 ORTHO05D006166 1.4e-81 307.4 272 60.3
PSO210G7769 Papaver somniferum HOM05D005073 ORTHO05D006166 1.4e-81 307.4 284 58.1
PGR044G0799 Punica granatum HOM05D005073 ORTHO05D006166 1.4e-81 307.4 300 57.3
Ciclev10003846m.g Citrus clementina HOM05D005073 ORTHO05D006166 2.3e-81 306.6 316 54.4
PSO447G0212 Papaver somniferum HOM05D005073 ORTHO05D006166 2.3e-81 306.6 274 60.2
Zm00001eb178820 Zea mays HOM05D005073 ORTHO05D006166 4.0e-81 305.8 231 65.4
ClCG03G008990 Citrullus lanatus HOM05D005073 ORTHO05D006166 1.2e-80 304.3 271 59.8
COL.COLO4_16466 Corchorus olitorius HOM05D005073 ORTHO05D006166 1.7e-79 300.4 300 55.7
arahy.Tifrunner.gnm1.ann1.K8DV01 Arachis hypogaea HOM05D005073 ORTHO05D006166 2.8e-79 299.7 254 62.2
Lj4C715T1 Lonicera japonica HOM05D005073 ORTHO05D006166 1.6e-77 293.9 247 61.9
AUR62034358 Chenopodium quinoa HOM05D005073 ORTHO05D006166 5.0e-76 288.9 289 56.7
AUR62022347 Chenopodium quinoa HOM05D005073 ORTHO05D006166 6.5e-76 288.5 335 51.6
EL10Ac1g01681 Beta vulgaris HOM05D005073 ORTHO05D006166 4.2e-75 285.8 257 59.1
BolC6t40215H Brassica oleracea HOM05D005073 ORTHO05D006166 5.5e-75 285.4 300 53.0
Lsat_1_v5_gn_6_102120 Lactuca sativa HOM05D005073 ORTHO05D006166 9.4e-75 284.6 246 59.8
Hund26651 Selenicereus undatus HOM05D005073 ORTHO05D006166 4.7e-74 282.3 333 51.1
BraA07t31846Z Brassica rapa HOM05D005073 ORTHO05D006166 8.0e-74 281.6 301 53.2
DCAR_008707 Daucus carota HOM05D005073 ORTHO05D006166 1.2e-72 277.7 249 58.6
Sc12g0004230 Simmondsia chinensis HOM05D005073 ORTHO05D006166 9.8e-72 274.6 236 60.6
Ah.16g109530 Amaranthus hybridus HOM05D005073 ORTHO05D006166 4.1e-70 269.2 284 54.2
Cre16.g681238 Chlamydomonas reinhardtii HOM05D005073 ORTHO05D006166 2.7e-69 266.5 325 46.5
BcaC08g47633 Brassica carinata HOM05D005073 ORTHO05D006166 3.4e-64 249.6 296 50.3
PRCOL_00000127 Prasinoderma coloniale HOM05D005073 ORTHO05D006166 1.6e-61 240.7 256 50.0
MCO14G420 Micromonas commoda HOM05D005073 ORTHO05D006166 7.8e-61 238.4 356 42.4
MBI02_g30882_MAGBIO Magnolia biondii HOM05D005073 ORTHO05D006166 1.1e-51 208.0 293 45.4
QL12p035942 Quercus lobata HOM05D005073 ORTHO05D006166 2.2e-39 167.2 131 65.6
vmacro21228 Vaccinium macrocarpon HOM05D005073 ORTHO05D006166 1.2e-37 161.4 179 52.5
QL12p035939 Quercus lobata HOM05D005073 ORTHO05D006166 9.5e-35 151.8 121 62.0
Rhsim06G0085400 Rhododendron simsii HOM05D005073 ORTHO05D006166 9.0e-25 118.6 172 42.4
Cfa027202 Carpinus fangiana HOM05D005073 ORTHO05D006166 3.4e-24 116.7 307 31.9
C09p47800 Brassica napus HOM05D005073 ORTHO05D006166 1.2e-21 108.2 175 41.1
MD15G1355000 Malus domestica HOM05D005073 ORTHO05D006166 2.7e-21 107.1 81 63.0
A09p41080 Brassica napus HOM05D005073 ORTHO05D006166 3.0e-20 103.6 137 46.0
A03p65370 Brassica napus HOM05D005073 ORTHO05D006166 1.1e-19 101.7 175 40.6
BraA03t15591Z Brassica rapa HOM05D005073 ORTHO05D006166 1.1e-19 101.7 175 40.6
BcaC07g39279 Brassica carinata HOM05D005073 ORTHO05D006166 1.5e-19 101.3 151 42.4
C08p22880 Brassica napus HOM05D005073 ORTHO05D006166 2.5e-19 100.5 182 39.0
BolC8t49924H Brassica oleracea HOM05D005073 ORTHO05D006166 2.5e-19 100.5 182 39.0
Hma1.2p1_0120F.1_g057040 Hydrangea macrophylla HOM05D005073 ORTHO05D006166 2.5e-19 100.5 82 62.2
C05p36400 Brassica napus HOM05D005073 ORTHO05D006166 4.3e-19 99.8 178 39.3
BcaC05g27652 Brassica carinata HOM05D005073 ORTHO05D006166 8.1e-18 95.5 180 37.8
Actinidia10299 Actinidia chinensis HOM05D005073 ORTHO05D006166 2.4e-17 94.0 86 57.0
BcaC06g36777 Brassica carinata HOM05D005073 ORTHO05D006166 1.5e-16 91.3 179 37.4
BolC7t40457H Brassica oleracea HOM05D005073 ORTHO05D006166 1.5e-16 91.3 179 38.0
BolC7t40456H Brassica oleracea HOM05D005073 ORTHO05D006166 2.6e-16 90.5 175 38.9
Duzib093G1393 Durio zibethinus HOM05D005073 ORTHO05D006166 3.5e-13 80.1 167 35.9
A04p08580 Brassica napus HOM05D005073 ORTHO05D006166 3.3e-11 73.6 116 40.5
BraA04t16552Z Brassica rapa HOM05D005073 ORTHO05D006166 3.3e-11 73.6 116 40.5
BraA09t39601Z Brassica rapa HOM05D005073 ORTHO05D006166 3.7e-10 70.1 108 41.7


User provided reference genes

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