Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.2e-186 656.4 339 100.0
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 5.3e-49 199.1 229 45.0
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 3.9e-44 183.0 217 45.6
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 5.2e-44 182.6 238 42.9
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 8.8e-44 181.8 221 43.4
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 1.1e-43 181.4 214 43.9
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.6e-43 180.3 192 44.8
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.6e-43 180.3 227 43.2
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 7.4e-43 178.7 229 43.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 9.7e-43 178.3 223 43.5
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 1.3e-42 177.9 227 40.1
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.7e-42 177.6 218 43.1
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.7e-42 177.6 233 42.1
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.2e-42 177.2 228 41.7
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 3.7e-42 176.4 201 45.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 3.7e-42 176.4 191 44.0
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 4.8e-42 176.0 233 41.2
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 8.2e-42 175.3 201 42.8
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.1e-41 174.9 208 42.8
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.1e-41 174.9 220 43.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.4e-41 174.5 208 42.8
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.4e-41 174.5 240 40.0
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 1.8e-41 174.1 225 43.1
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.4e-41 173.7 266 38.7
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.4e-41 173.7 233 40.8
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 2.4e-41 173.7 260 38.5
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 2.4e-41 173.7 227 43.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.1e-41 173.3 218 42.2
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 3.1e-41 173.3 208 42.8
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 3.1e-41 173.3 227 41.0
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 3.1e-41 173.3 227 41.0
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 3.1e-41 173.3 228 40.8
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.1e-41 172.9 240 41.2
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.3e-41 172.6 212 43.4
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 5.3e-41 172.6 220 41.8
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 5.3e-41 172.6 209 43.1
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 5.3e-41 172.6 174 47.1
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 5.3e-41 172.6 216 41.7
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.1e-41 171.8 233 39.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 9.1e-41 171.8 218 41.7
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 1.6e-40 171.0 227 41.0
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.6e-40 171.0 214 42.5
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 2.0e-40 170.6 216 43.5
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.0e-40 170.6 229 39.3
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.0e-40 170.6 225 39.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 2.0e-40 170.6 225 39.6
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.0e-40 170.6 213 43.2
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 2.0e-40 170.6 222 40.1
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.6e-40 170.2 216 43.5
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.6e-40 170.2 248 39.1
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 2.6e-40 170.2 216 43.5
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 2.6e-40 170.2 215 40.5
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 4.5e-40 169.5 198 44.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 5.9e-40 169.1 235 40.0
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 7.7e-40 168.7 218 41.3
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 7.7e-40 168.7 215 40.9
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.0e-39 168.3 208 40.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 1.3e-39 167.9 216 42.1
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.3e-39 167.9 222 42.3
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.7e-39 167.5 221 42.5
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 2.2e-39 167.2 233 40.3
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 2.9e-39 166.8 217 40.6
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 3.8e-39 166.4 237 37.6
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 3.8e-39 166.4 230 40.0
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 5.0e-39 166.0 222 42.8
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 6.5e-39 165.6 257 37.0
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 8.5e-39 165.2 212 40.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 8.5e-39 165.2 240 40.4
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.1e-38 164.9 233 40.8
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.5e-38 164.5 214 41.1
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.9e-38 164.1 232 40.5
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 2.5e-38 163.7 227 37.4
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 4.2e-38 162.9 193 42.5
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 4.2e-38 162.9 193 42.5
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 5.5e-38 162.5 244 37.3
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 7.2e-38 162.2 237 35.0
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 9.4e-38 161.8 253 38.7
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.1e-37 160.6 231 38.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 3.6e-37 159.8 234 38.5
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 4.7e-37 159.5 220 37.7
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 6.1e-37 159.1 251 35.1
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.8e-36 157.5 281 34.9
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.2e-36 156.0 234 37.2
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 1.2e-35 154.8 262 36.3
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 1.5e-35 154.5 226 38.5
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 7.5e-35 152.1 222 38.3
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.7e-34 149.8 215 39.1
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 5.3e-33 146.0 175 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 1.2e-32 144.8 338 31.7
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 4.5e-32 142.9 234 35.9
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 5.9e-32 142.5 229 38.4
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 5.0e-31 139.4 229 36.2
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 1.6e-29 134.4 327 30.0
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 4.7e-29 132.9 193 38.3
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.0e-29 132.1 233 34.3
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.0e-28 129.8 263 33.1
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 5.2e-28 129.4 202 35.6
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 8.8e-28 128.6 254 33.1
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 2.6e-27 127.1 143 39.9
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 4.4e-27 126.3 191 39.3
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 6.6e-23 112.5 134 38.8
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 6.8e-20 102.4 343 28.6
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.2e-19 101.7 192 36.5
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 9.8e-19 98.6 150 33.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.7e-18 97.8 344 27.3
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 1.7e-18 97.8 220 29.1
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 3.9e-15 86.7 91 41.8
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 9.5e-14 82.0 227 28.2
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.1e-13 80.9 79 40.5
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 6.1e-13 79.3 158 38.0
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 6.1e-13 79.3 80 42.5
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-09 68.6 131 32.1
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 2.4e-09 67.4 138 29.7
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 5.4e-09 66.2 101 43.6
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.2e-08 65.1 131 30.5
Pp3c1_15160 Physcomitrium patens HOM05D000160 ORTHO05D316923 1.2e-08 65.1 126 27.8
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 2.3e-07 60.8 116 43.1
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 3.0e-07 60.5 239 29.7


User provided reference genes

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