Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 3.4e-274 948.0 566 100.0
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 3.2e-200 702.2 480 91.7
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 6.0e-162 575.1 531 68.4
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 7.3e-152 541.6 580 65.0
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 5.8e-149 531.9 568 62.0
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 9.9e-149 531.2 500 67.2
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 4.3e-144 515.8 581 58.9
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 2.4e-142 510.0 582 57.9
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 3.2e-139 499.6 489 70.6
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 1.2e-138 497.7 538 61.5
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 6.0e-138 495.4 581 58.7
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 6.2e-135 485.3 535 55.7
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.1e-134 484.6 582 58.8
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 5.3e-134 482.3 580 58.6
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 5.8e-133 478.8 554 56.3
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 8.4e-132 474.9 579 57.9
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 4.2e-131 472.6 577 54.8
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 1.0e-129 468.0 607 55.8
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 2.3e-129 466.8 532 61.8
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 3.3e-128 463.0 512 59.2
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 4.3e-128 462.6 535 59.4
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 7.4e-128 461.8 577 54.6
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 3.6e-127 459.5 580 55.5
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 4.8e-127 459.1 577 54.2
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 1.1e-126 458.0 580 57.2
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 9.0e-126 454.9 512 62.9
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 5.8e-125 452.2 472 60.2
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 2.2e-124 450.3 581 55.2
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 5.5e-123 445.7 582 55.2
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 2.7e-122 443.4 468 61.1
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 2.3e-121 440.3 530 55.5
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 7.4e-120 435.3 569 53.8
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 1.5e-117 427.6 545 53.6
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 3.8e-116 422.9 305 93.8
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 4.6e-114 416.0 573 55.3
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 6.0e-114 415.6 647 42.3
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 1.3e-113 414.5 546 54.0
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 4.3e-112 409.5 580 52.1
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 4.3e-112 409.5 480 58.8
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 1.3e-111 407.9 591 47.2
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 6.3e-111 405.6 472 60.6
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 8.2e-111 405.2 578 54.5
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 1.1e-110 404.8 573 50.1
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 4.5e-109 399.4 497 58.1
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 7.6e-109 398.7 583 52.7
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 1.4e-107 394.4 573 48.2
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 2.5e-107 393.7 536 55.0
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 5.5e-107 392.5 581 53.2
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 1.6e-106 391.0 564 54.1
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 7.9e-106 388.7 558 52.7
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 1.0e-105 388.3 472 49.6
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 1.3e-105 387.9 471 59.4
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 1.8e-105 387.5 568 53.7
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 3.3e-104 383.3 581 50.9
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 5.7e-104 382.5 573 52.4
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 9.7e-104 381.7 455 57.4
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 9.7e-104 381.7 568 51.8
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 9.7e-104 381.7 569 52.9
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 1.6e-103 380.9 568 51.9
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 2.2e-103 380.6 425 62.8
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 2.8e-103 380.2 580 50.9
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 3.7e-103 379.8 532 50.6
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 3.7e-103 379.8 475 58.9
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 3.7e-103 379.8 534 45.1
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 8.2e-103 378.6 494 45.7
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 1.2e-101 374.8 520 53.5
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 1.3e-100 371.3 531 50.5
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 1.4e-99 367.9 556 50.5
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 6.7e-97 359.0 576 50.5
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 8.8e-97 358.6 561 42.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.1e-96 358.2 559 49.0
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 2.2e-95 354.0 576 46.4
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 6.3e-95 352.4 541 50.5
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 8.2e-95 352.1 455 52.7
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.1e-94 351.7 392 57.7
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 6.9e-94 349.0 477 52.6
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 2.2e-92 344.0 532 49.2
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 5.0e-92 342.8 532 50.2
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 2.5e-91 340.5 535 50.5
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 7.9e-90 335.5 547 39.9
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 2.6e-88 330.5 535 48.2
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.3e-87 328.2 532 49.2
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 1.4e-86 324.7 527 49.1
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 2.4e-86 323.9 533 49.2
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 7.0e-86 322.4 496 51.0
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 7.7e-85 318.9 509 47.9
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.7e-84 317.8 544 45.8
DCAR_010593 Daucus carota HOM05D005626 ORTHO05D007372 1.6e-82 311.2 228 69.3
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 3.6e-82 310.1 577 43.5
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 6.1e-82 309.3 526 48.1
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 1.0e-81 308.5 490 48.0
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 3.0e-81 307.0 471 51.4
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 5.2e-81 306.2 526 47.7
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 8.8e-81 305.4 473 50.1
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 2.0e-80 304.3 473 49.9
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 7.5e-80 302.4 534 45.3
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.4e-78 298.1 300 69.0
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 5.3e-78 296.2 522 47.3
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 5.9e-77 292.7 568 46.0
PGSC0003DMG400018528 Solanum tuberosum HOM05D005626 ORTHO05D007372 1.3e-71 275.0 211 69.7
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 1.7e-71 274.6 498 49.2
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 3.7e-71 273.5 531 42.9
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 1.4e-70 271.6 345 58.6
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 2.0e-69 267.7 203 94.6
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.6e-66 258.1 506 43.3
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 2.8e-66 257.3 549 37.5
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 1.6e-53 214.9 417 40.8
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 6.0e-45 186.4 339 47.5
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 5.0e-44 183.3 476 32.6
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 6.0e-37 159.8 133 57.9
Glyma.06G130267 Glycine max HOM05D005626 ORTHO05D007372 7.8e-37 159.5 115 69.6
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 5.6e-35 153.3 120 60.0
MBI19_g14787_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.1e-33 147.5 96 71.9
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 4.4e-32 143.7 342 29.8
QL09p008133 Quercus lobata HOM05D005626 ORTHO05D007372 3.5e-29 134.0 82 81.7
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 6.6e-28 129.8 157 43.3
MD07G1293400 Malus domestica HOM05D005626 ORTHO05D007372 1.1e-27 129.0 122 64.8
BcaB01g04214 Brassica carinata HOM05D005626 ORTHO05D007372 2.6e-24 117.9 154 47.4
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-23 115.5 389 25.7
FAN10G4199 Fragaria x ananassa HOM05D005626 ORTHO05D007372 4.2e-22 110.5 121 54.5
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 2.1e-21 108.2 85 62.4
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.9e-19 101.7 318 37.1
Lj1C1019T10 Lonicera japonica HOM05D005626 ORTHO05D007372 9.6e-19 99.4 84 64.3
SEGI_36936 Sequoiadendron giganteum HOM05D005626 ORTHO05D007372 2.4e-17 94.7 191 31.4
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 2.6e-16 91.3 396 37.1
Cfa019813 Carpinus fangiana HOM05D005626 ORTHO05D007372 1.6e-13 82.0 62 62.9
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 2.1e-13 81.6 98 49.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 1.0e-12 79.3 155 36.8
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 1.0e-12 79.3 54 66.7
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 5.1e-12 77.0 60 63.3
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 9.6e-11 72.8 140 28.6
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 8.1e-10 69.7 185 28.1
CBR_g37721 Chara braunii HOM05D005626 ORTHO05D007372 1.1e-06 59.3 123 30.1


User provided reference genes

Program Settings