Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G012101 Manihot esculenta HOM05D005626 ORTHO05D007372 1.4e-136 490.0 321 100.0
Manes.06G012351 Manihot esculenta HOM05D005626 ORTHO05D007372 2.8e-116 422.5 305 93.8
Manes.06G011400 Manihot esculenta HOM05D005626 ORTHO05D007372 1.0e-102 377.5 305 87.5
Haze_00226 Corylus avellana HOM05D005626 ORTHO05D007372 8.3e-68 261.5 300 63.3
Prupe.2G313200 Prunus persica HOM05D005626 ORTHO05D007372 4.1e-67 259.2 307 64.5
Potri.015G010800 Populus trichocarpa HOM05D005626 ORTHO05D007372 2.7e-66 256.5 203 67.0
Cfa016215 Carpinus fangiana HOM05D005626 ORTHO05D007372 5.9e-66 255.4 300 62.3
GSVIVG01038569001 Vitis vinifera HOM05D005626 ORTHO05D007372 2.3e-62 243.4 300 62.7
Atru.chr12.2245_Atru.chr12.2244 Acer truncatum HOM05D005626 ORTHO05D007372 3.7e-60 236.1 293 62.8
Thecc.03G201200 Theobroma cacao HOM05D005626 ORTHO05D007372 1.1e-59 234.6 295 64.1
QL09p007984 Quercus lobata HOM05D005626 ORTHO05D007372 3.2e-59 233.0 299 62.2
CSS0044766 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.9e-57 226.1 299 56.9
THA.LOC104799967 Tarenaya hassleriana HOM05D005626 ORTHO05D007372 8.6e-57 224.9 299 58.2
Dinv29256 Davidia involucrata HOM05D005626 ORTHO05D007372 1.9e-56 223.8 205 59.5
MD01G1222800 Malus domestica HOM05D005626 ORTHO05D007372 2.5e-56 223.4 201 57.7
Sabra15G0008900 Salix brachista HOM05D005626 ORTHO05D007372 3.3e-56 223.0 152 77.0
CiPaw.06G045100 Carya illinoinensis HOM05D005626 ORTHO05D007372 1.2e-55 221.1 204 55.4
CANSAT21G0821 Cannabis sativa HOM05D005626 ORTHO05D007372 2.8e-55 219.9 262 64.9
TAR375G0360 Trochodendron aralioides HOM05D005626 ORTHO05D007372 3.6e-55 219.5 311 59.2
TWI39G0896 Tripterygium wilfordii HOM05D005626 ORTHO05D007372 4.7e-55 219.2 309 59.2
Gohir.D09G179900 Gossypium hirsutum HOM05D005626 ORTHO05D007372 1.0e-54 218.0 303 58.4
COL.COLO4_16792 Corchorus olitorius HOM05D005626 ORTHO05D007032 8.9e-54 214.9 205 55.6
Duzib084G0104 Durio zibethinus HOM05D005626 ORTHO05D007372 8.9e-54 214.9 205 54.6
FAN03G2656 Fragaria x ananassa HOM05D005626 ORTHO05D007032 2.0e-53 213.8 278 63.7
QL09p008055 Quercus lobata HOM05D005626 ORTHO05D007372 3.4e-53 213.0 314 42.4
Gorai.006G201900 Gossypium raimondii HOM05D005626 ORTHO05D007372 4.4e-53 212.6 337 54.3
RcHm_v2.0_Chr1g0381501 Rosa chinensis HOM05D005626 ORTHO05D007372 4.4e-53 212.6 279 63.8
MBI07_g24765_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.7e-52 209.5 317 56.8
FAN10G0040 Fragaria x ananassa HOM05D005626 ORTHO05D009683 2.4e-51 206.8 277 63.5
CSS0003989 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 3.2e-51 206.5 197 55.8
FAN06G4319 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.2e-51 206.5 278 61.9
Actinidia18659 Actinidia chinensis HOM05D005626 ORTHO05D007372 1.2e-50 204.5 202 55.4
FvH4_7g31990 Fragaria vesca HOM05D005626 ORTHO05D007372 2.0e-50 203.8 278 61.5
Hma1.2p1_2307F.1_g319430 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 3.5e-50 203.0 204 52.5
Hma1.2p1_0591F.1_g185250 Hydrangea macrophylla HOM05D005626 ORTHO05D007372 7.8e-50 201.8 204 52.0
arahy.Tifrunner.gnm1.ann1.ULB6CG Arachis hypogaea HOM05D005626 ORTHO05D007372 5.0e-49 199.1 304 52.3
AUR62006074 Chenopodium quinoa HOM05D005626 ORTHO05D007372 5.0e-49 199.1 304 53.0
Cc02_g01370 Coffea canephora HOM05D005626 ORTHO05D007372 6.6e-49 198.7 313 46.3
Oeu010695.1 Olea europaea HOM05D005626 ORTHO05D007372 1.1e-48 198.0 304 53.6
Hund11648 Selenicereus undatus HOM05D005626 ORTHO05D007372 2.5e-48 196.8 311 52.7
TPR.G33639 Trifolium pratense HOM05D005626 ORTHO05D007372 3.3e-48 196.4 307 53.1
PSO063G0511 Papaver somniferum HOM05D005626 ORTHO05D007372 1.2e-47 194.5 196 53.1
Nn1g00302 Nelumbo nucifera HOM05D005626 ORTHO05D007372 1.6e-47 194.1 201 52.7
arahy.Tifrunner.gnm1.ann1.CHU3M4 Arachis hypogaea HOM05D005626 ORTHO05D007372 2.8e-47 193.4 305 52.8
PSO170G4344 Papaver somniferum HOM05D005626 ORTHO05D007372 6.2e-47 192.2 194 54.1
FAN10G2571 Fragaria x ananassa HOM05D005626 ORTHO05D007372 3.1e-46 189.9 182 56.6
Glyma.04G234300 Glycine max HOM05D005626 ORTHO05D007372 5.2e-46 189.1 202 50.0
PGR042G1168 Punica granatum HOM05D005626 ORTHO05D007372 5.2e-46 189.1 292 59.6
Aa31LG3G9390 Aethionema arabicum HOM05D005626 ORTHO05D007372 1.5e-45 187.6 198 51.0
Ciclev10020013m.g Citrus clementina HOM05D005626 ORTHO05D007372 4.4e-45 186.0 138 65.9
EL10Ac3g05260 Beta vulgaris HOM05D005626 ORTHO05D007372 9.8e-45 184.9 201 51.7
Ah.07g205460 Amaranthus hybridus HOM05D005626 ORTHO05D007372 2.2e-44 183.7 202 48.5
Migut.F00199 Erythranthe guttata HOM05D005626 ORTHO05D007372 2.9e-44 183.3 202 49.0
Sed0007830 Sechium edule HOM05D005626 ORTHO05D007372 1.4e-43 181.0 203 50.2
Psat5g076080 Pisum sativum HOM05D005626 ORTHO05D007372 7.1e-43 178.7 296 53.0
Cpa.g.sc3.101 Carica papaya HOM05D005626 ORTHO05D007372 1.6e-42 177.6 199 50.3
Medtr3g091780 Medicago truncatula HOM05D005626 ORTHO05D007372 2.1e-42 177.2 199 46.7
Lj8A623T21 Lonicera japonica HOM05D005626 ORTHO05D007372 2.7e-42 176.8 137 62.0
HanXRQChr15g0485681 Helianthus annuus HOM05D005626 ORTHO05D007372 6.0e-42 175.6 201 48.8
Ca_16720_v3 Cicer arietinum L. HOM05D005626 ORTHO05D007372 7.8e-42 175.3 199 47.2
VMungo1309G2515 Vigna mungo HOM05D005626 ORTHO05D007372 7.8e-42 175.3 198 49.5
arahy.Tifrunner.gnm1.ann1.1DU7LF Arachis hypogaea HOM05D005626 ORTHO05D007372 1.0e-41 174.9 304 47.0
Phvul.009G051300 Phaseolus vulgaris HOM05D005626 ORTHO05D007372 1.0e-41 174.9 199 49.2
AL8G27710 Arabidopsis lyrata HOM05D005626 ORTHO05D007372 1.3e-41 174.5 198 48.0
AT5G53080 Arabidopsis thaliana HOM05D005626 ORTHO05D007372 6.6e-41 172.2 198 47.0
Lsat_1_v5_gn_9_49841 Lactuca sativa HOM05D005626 ORTHO05D007372 1.1e-40 171.4 205 48.8
ClCG01G000360 Citrullus lanatus HOM05D005626 ORTHO05D007372 1.5e-40 171.0 203 49.8
Lj1g0019302 Lotus japonicus HOM05D005626 ORTHO05D007372 1.9e-40 170.6 199 47.7
Carub.0008s1328 Capsella rubella HOM05D005626 ORTHO05D007372 2.5e-40 170.2 197 46.7
arahy.Tifrunner.gnm1.ann1.DCMH6Q Arachis hypogaea HOM05D005626 ORTHO05D007372 4.3e-40 169.5 228 61.0
BcaB05g22010 Brassica carinata HOM05D005626 ORTHO05D007372 7.3e-40 168.7 312 35.9
Nitab4.5_0005491g0050 Nicotiana tabacum HOM05D005626 ORTHO05D007372 7.3e-40 168.7 303 47.5
CDE02G3804 Ceratophyllum demersum HOM05D005626 ORTHO05D007372 1.6e-39 167.5 234 59.4
HPP92_005288 Vanilla planifolia HOM05D005626 ORTHO05D007372 1.6e-39 167.5 245 55.5
Eucgr.A01448 Eucalyptus grandis HOM05D005626 ORTHO05D007372 2.8e-39 166.8 178 54.5
CARHR266100 Cardamine hirsuta HOM05D005626 ORTHO05D007372 3.6e-39 166.4 197 46.7
CsaV3_5G000430 Cucumis sativus L. HOM05D005626 ORTHO05D007372 4.7e-39 166.0 199 47.7
Sopen03g022800 Solanum pennellii HOM05D005626 ORTHO05D007372 4.7e-39 166.0 303 47.5
Solyc03g082990.3 Solanum lycopersicum HOM05D005626 ORTHO05D007372 1.1e-38 164.9 303 47.2
AUR62035551 Chenopodium quinoa HOM05D005626 ORTHO05D007372 5.2e-38 162.5 324 39.8
Lalb_Chr08g0240121 Lupinus albus HOM05D005626 ORTHO05D007372 8.9e-38 161.8 145 54.5
Thhalv10013148m.g Eutrema salsugineum HOM05D005626 ORTHO05D007372 1.5e-37 161.0 167 49.1
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 1.5e-37 161.0 202 46.5
MELO3C005892.2 Cucumis melo HOM05D005626 ORTHO05D007372 2.6e-37 160.2 136 58.1
ECA232G0910 Erigeron canadensis HOM05D005626 ORTHO05D007372 2.6e-37 160.2 137 57.7
Peaxi162Scf00740g00226 Petunia axillaris HOM05D005626 ORTHO05D007372 2.6e-37 160.2 138 56.5
unitig_92.g28249 Utricularia gibba HOM05D005626 ORTHO05D007372 7.6e-37 158.7 246 59.8
BolC2t08014H Brassica oleracea HOM05D005626 ORTHO05D007372 9.9e-37 158.3 145 51.7
MBI19_g14786_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 9.9e-37 158.3 133 57.1
Sp6g15250 Schrenkiella parvula HOM05D005626 ORTHO05D007372 9.9e-37 158.3 196 44.9
BraA02t06193Z Brassica rapa HOM05D005626 ORTHO05D007372 1.3e-36 157.9 134 54.5
CAN.G481.28 Capsicum annuum HOM05D005626 ORTHO05D007372 1.7e-36 157.5 272 48.2
A02p11310 Brassica napus HOM05D005626 ORTHO05D007372 1.1e-35 154.8 134 53.7
Glyma.06G130333 Glycine max HOM05D005626 ORTHO05D007372 1.1e-35 154.8 120 60.8
Aqoxy5G04311 Aquilegia oxysepala HOM05D005626 ORTHO05D007372 4.1e-35 152.9 194 44.8
C02p18690 Brassica napus HOM05D005626 ORTHO05D007372 7.1e-35 152.1 195 43.1
BcaC03g14458 Brassica carinata HOM05D005626 ORTHO05D007372 4.6e-34 149.4 159 47.2
MSTRG.27018 Avicennia marina HOM05D005626 ORTHO05D007372 3.0e-33 146.7 121 56.2
Gohir.A09G185000 Gossypium hirsutum HOM05D005626 ORTHO05D007372 2.5e-32 143.7 199 64.3
ATR0730G125 Amborella trichopoda HOM05D005626 ORTHO05D007372 2.0e-29 134.0 255 52.9
BcaB01g04215 Brassica carinata HOM05D005626 ORTHO05D007372 3.8e-28 129.8 157 43.3
CSS0000100 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 4.9e-28 129.4 288 34.4
Manes.06G011750 Manihot esculenta HOM05D005626 ORTHO05D007372 1.6e-26 124.4 139 84.2
BcaB05g22007 Brassica carinata HOM05D005626 ORTHO05D007372 4.6e-26 122.9 213 37.1
Sc25g0000940 Simmondsia chinensis HOM05D005626 ORTHO05D007372 6.6e-25 119.0 184 63.6
SalBow4G1489 Salvia bowleyana HOM05D005626 ORTHO05D007372 1.5e-24 117.9 292 32.5
MBI07_g43862_MAGBIO Magnolia biondii HOM05D005626 ORTHO05D007372 3.6e-23 113.2 256 33.6
CSS0006573 Camellia sinensis var. sinensis HOM05D005626 ORTHO05D007372 5.3e-22 109.4 85 63.5
Mapoly0045s0029 Marchantia polymorpha HOM05D005626 ORTHO05D007372 9.0e-22 108.6 132 40.2
Pp3c5_16240 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.9e-16 90.9 140 35.7
Pp3c5_16230 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.3e-15 88.2 146 34.9
AagrBONN_evm.TU.Sc2ySwM_369.443 Anthoceros agrestis HOM05D005626 ORTHO05D007372 4.8e-15 86.3 144 36.8
QL09p008114 Quercus lobata HOM05D005626 ORTHO05D007372 4.0e-14 83.2 98 50.0
Lj1A1021T50 Lonicera japonica HOM05D005626 ORTHO05D007372 5.8e-13 79.3 126 42.9
Actinidia06140 Actinidia chinensis HOM05D005626 ORTHO05D007372 9.9e-13 78.6 60 65.0
Mapoly0001s0084 Marchantia polymorpha HOM05D005626 ORTHO05D007372 9.9e-13 78.6 246 30.9
MD07G1293500 Malus domestica HOM05D005626 ORTHO05D007372 3.8e-12 76.6 54 63.0
Pp3c23_14930 Physcomitrium patens HOM05D005626 ORTHO05D007372 8.4e-12 75.5 143 30.8
Pp3c16_9300 Physcomitrium patens HOM05D005626 ORTHO05D007372 1.4e-11 74.7 153 28.8
Pp3c8_12740 Physcomitrium patens HOM05D005626 ORTHO05D007372 9.3e-11 72.0 140 27.9
Lj1A1021T49 Lonicera japonica HOM05D005626 ORTHO05D007372 6.9e-06 55.8 80 40.0


User provided reference genes

Program Settings