Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 7.2e-303 1043.1 525 100.0
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.6e-201 706.4 526 69.8
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 3.2e-178 629.0 522 62.5
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 2.6e-175 619.4 573 59.3
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.3e-174 617.1 526 62.4
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 1.7e-174 616.7 525 61.7
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 2.6e-172 609.4 535 60.7
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 3.5e-172 609.0 527 60.5
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 7.2e-170 601.3 575 58.3
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 7.2e-170 601.3 530 59.1
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 2.7e-169 599.4 551 59.7
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 6.1e-169 598.2 529 59.9
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 2.4e-165 586.3 538 60.0
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 5.9e-164 581.6 533 58.7
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 2.9e-163 579.3 537 55.9
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 4.2e-162 575.5 525 57.0
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 3.6e-161 572.4 707 48.2
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 8.8e-160 567.8 525 56.6
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.2e-159 567.4 597 54.4
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 2.0e-159 566.6 553 56.1
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 2.2e-158 563.1 538 54.6
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.0e-155 554.3 552 53.8
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.3e-155 553.9 555 54.4
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.3e-155 553.9 559 52.8
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.5e-154 550.4 545 55.6
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 7.2e-154 548.1 555 53.9
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 2.3e-152 543.1 546 52.6
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 4.0e-152 542.3 529 53.7
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 6.8e-152 541.6 560 52.0
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 6.8e-152 541.6 560 52.3
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.5e-151 540.4 580 50.9
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 7.5e-151 538.1 546 52.7
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 9.8e-151 537.7 568 51.8
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.1e-149 534.3 561 52.0
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.6e-148 530.4 560 51.4
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 2.0e-148 530.0 562 52.0
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 2.0e-148 530.0 582 50.0
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 2.7e-148 529.6 562 51.1
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 7.7e-148 528.1 564 51.6
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 7.3e-146 521.5 544 53.1
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 1.2e-145 520.8 563 50.4
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 2.6e-143 513.1 575 50.4
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.7e-142 510.4 508 55.9
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 8.3e-142 508.1 543 49.9
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 3.2e-141 506.1 543 49.7
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.2e-140 504.2 546 51.5
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 1.6e-140 503.8 542 50.9
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.0e-139 501.1 572 50.9
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 1.5e-138 497.3 546 50.2
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.5e-138 497.3 578 50.3
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 1.9e-138 496.9 581 50.1
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 7.5e-135 485.0 535 52.1
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 9.8e-135 484.6 535 51.4
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 3.7e-134 482.6 539 50.5
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 1.9e-133 480.3 555 50.3
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 4.1e-133 479.2 544 48.7
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 4.1e-133 479.2 533 52.0
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 1.6e-132 477.2 611 45.2
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.0e-132 476.9 473 55.4
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 1.0e-131 474.6 589 46.0
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 3.9e-131 472.6 520 50.6
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 6.6e-131 471.9 536 49.4
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 2.1e-129 466.8 538 48.5
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 8.1e-129 464.9 543 48.3
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 2.3e-128 463.4 548 47.8
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 3.1e-128 463.0 550 48.5
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 5.2e-128 462.2 585 46.0
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 6.8e-128 461.8 542 47.2
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 1.5e-127 460.7 534 47.4
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 3.4e-127 459.5 550 48.2
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 3.7e-126 456.1 669 42.6
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 4.9e-126 455.7 519 50.7
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 5.4e-125 452.2 534 50.2
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 7.1e-125 451.8 442 57.0
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 2.7e-124 449.9 539 47.7
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.1e-123 445.7 532 48.3
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 2.3e-120 436.8 532 47.6
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 6.4e-118 428.7 495 49.1
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 2.7e-116 423.3 540 46.7
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 2.3e-115 420.2 503 48.3
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 6.4e-110 402.1 569 43.8
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 2.1e-108 397.1 585 44.6
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 7.8e-108 395.2 560 40.5
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 6.6e-107 392.1 454 48.5
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 2.8e-105 386.7 477 46.5
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 4.2e-101 372.9 495 45.9
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 9.3e-101 371.7 551 41.4
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 4.0e-96 356.3 556 38.7
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 3.8e-94 349.7 333 53.2
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 7.9e-92 342.0 445 45.8
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 1.0e-91 341.7 473 41.9
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 9.0e-88 328.6 408 46.3
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.5e-82 310.5 386 47.7
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.1e-80 303.5 443 43.8
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 2.5e-77 293.9 592 34.8
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 6.1e-76 289.3 209 67.5
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 1.4e-72 278.1 485 38.1
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.9e-71 272.7 421 40.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 5.0e-70 269.6 473 39.5
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 1.9e-69 267.7 382 46.3
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 2.8e-65 253.8 193 62.7
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 2.2e-57 227.6 295 46.4
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 2.2e-57 227.6 536 33.2
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 5.3e-56 223.0 148 73.0
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 2.0e-55 221.1 148 73.0
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.6e-55 220.7 315 46.7
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 6.5e-54 216.1 359 41.8
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.4e-48 197.6 138 67.4
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 2.2e-41 174.5 120 69.2
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 1.1e-37 162.2 585 28.0
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 2.5e-37 161.0 214 46.3
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 4.1e-32 143.7 397 30.5
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 7.0e-32 142.9 120 60.0
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.3e-25 122.1 159 45.9
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 2.8e-20 104.4 71 69.0
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 6.8e-19 99.8 83 65.1
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 5.8e-18 96.7 192 33.3
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.5e-13 82.0 49 77.6
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 2.9e-09 67.8 60 60.0
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 3.2e-08 64.3 68 47.1
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 1.6e-07 62.0 30 86.7
MCO11G052 Micromonas commoda HOM05D006560 ORTHO05D008164 6.6e-06 56.6 150 31.3


User provided reference genes

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