Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.6002 Avicennia marina HOM05D001514 ORTHO05D005209 1.7e-131 472.6 232 100.0
SGA_v2.0_scaffold97G29140 Striga asiatica HOM05D001514 ORTHO05D005209 1.8e-112 409.5 223 87.9
SalBow6G1458 Salvia bowleyana HOM05D001514 ORTHO05D005209 3.7e-110 401.7 223 85.2
Cc06_g12020 Coffea canephora HOM05D001514 ORTHO05D005209 1.9e-106 389.4 223 82.5
SalBow3G1655 Salvia bowleyana HOM05D001514 ORTHO05D005209 4.2e-106 388.3 218 84.4
Migut.J00937 Erythranthe guttata HOM05D001514 ORTHO05D005209 5.5e-106 387.9 221 83.3
Nitab4.5_0011363g0010 Nicotiana tabacum HOM05D001514 ORTHO05D005209 5.7e-103 377.9 231 78.4
PGSC0003DMG400000323 Solanum tuberosum HOM05D001514 ORTHO05D005209 3.1e-101 372.1 224 79.5
Solyc12g009090.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 9.1e-101 370.5 224 79.0
Sopen12g004040 Solanum pennellii HOM05D001514 ORTHO05D005209 2.7e-100 369.0 224 78.6
Lsat_1_v5_gn_7_35041 Lactuca sativa HOM05D001514 ORTHO05D005209 2.8e-97 359.0 218 78.0
Nitab4.5_0000073g0250 Nicotiana tabacum HOM05D001514 ORTHO05D005209 6.1e-97 357.8 225 77.3
Prupe.7G201200 Prunus persica HOM05D001514 ORTHO05D005209 1.5e-95 353.2 218 73.9
CSS0005970 Camellia sinensis var. sinensis HOM05D001514 ORTHO05D005209 2.0e-95 352.8 223 74.0
ECA233G5402 Erigeron canadensis HOM05D001514 ORTHO05D005209 9.8e-95 350.5 219 76.3
Haze_10270 Corylus avellana HOM05D001514 ORTHO05D005209 1.3e-94 350.1 223 74.0
TWI60G0494 Tripterygium wilfordii HOM05D001514 ORTHO05D005209 1.7e-94 349.7 223 74.9
Manes.03G199800 Manihot esculenta HOM05D001514 ORTHO05D005209 4.9e-94 348.2 223 75.3
CiPaw.03G207800 Carya illinoinensis HOM05D001514 ORTHO05D005209 8.3e-94 347.4 223 73.1
Dinv42376 Davidia involucrata HOM05D001514 ORTHO05D005209 8.3e-94 347.4 218 72.9
Thecc.09G079100 Theobroma cacao HOM05D001514 ORTHO05D005209 1.8e-93 346.3 223 72.2
Ciclev10012695m.g Citrus clementina HOM05D001514 ORTHO05D005209 5.4e-93 344.7 223 73.5
HanXRQChr09g0237811 Helianthus annuus HOM05D001514 ORTHO05D005209 5.4e-93 344.7 219 75.8
QL11p000460 Quercus lobata HOM05D001514 ORTHO05D005209 7.0e-93 344.4 223 71.3
Potri.006G143400 Populus trichocarpa HOM05D001514 ORTHO05D005209 2.0e-92 342.8 223 71.7
COL.COLO4_18112 Corchorus olitorius HOM05D001514 ORTHO05D005209 7.8e-92 340.9 223 71.3
Cpa.g.sc280.6 Carica papaya HOM05D001514 ORTHO05D005209 1.3e-91 340.1 223 72.2
Hma1.2p1_0928F.1_g237710 Hydrangea macrophylla HOM05D001514 ORTHO05D005209 2.3e-91 339.3 217 71.9
Eucgr.C00825 Eucalyptus grandis HOM05D001514 ORTHO05D005209 3.8e-91 338.6 223 70.9
Lj7A685T53 Lonicera japonica HOM05D001514 ORTHO05D005209 3.8e-91 338.6 265 63.0
Nn8g38685 Nelumbo nucifera HOM05D001514 ORTHO05D005209 8.6e-91 337.4 213 74.2
Gohir.A13G191300 Gossypium hirsutum HOM05D001514 ORTHO05D005209 1.1e-90 337.0 223 70.4
TAR626G0523 Trochodendron aralioides HOM05D001514 ORTHO05D005209 1.1e-90 337.0 213 73.2
TAR626G1304 Trochodendron aralioides HOM05D001514 ORTHO05D005209 1.1e-90 337.0 213 73.2
Nitab4.5_0001866g0080 Nicotiana tabacum HOM05D001514 ORTHO05D005209 1.5e-90 336.7 215 76.3
Atru.chr7.1692 Acer truncatum HOM05D001514 ORTHO05D005209 9.5e-90 334.0 224 71.0
Duzib168G1760 Durio zibethinus HOM05D001514 ORTHO05D005209 9.5e-90 334.0 225 69.8
MD15G1215700 Malus domestica HOM05D001514 ORTHO05D005209 9.5e-90 334.0 232 66.4
CsaV3_2G001190 Cucumis sativus L. HOM05D001514 ORTHO05D005209 1.2e-89 333.6 224 71.9
MBI13_g11335_MAGBIO Magnolia biondii HOM05D001514 ORTHO05D005209 1.2e-89 333.6 219 69.9
TAR383G0900 Trochodendron aralioides HOM05D001514 ORTHO05D005209 2.1e-89 332.8 212 71.7
MD15G1215800 Malus domestica HOM05D001514 ORTHO05D005209 3.6e-89 332.0 227 66.1
Solyc05g041170.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.6e-89 332.0 218 69.3
THA.LOC104808891 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 4.7e-89 331.6 223 70.4
EL10Ac8g19111 Beta vulgaris HOM05D001514 ORTHO05D005209 8.0e-89 330.9 223 67.7
AUR62025186 Chenopodium quinoa HOM05D001514 ORTHO05D005209 8.0e-89 330.9 223 66.8
Gohir.D13G196700 Gossypium hirsutum HOM05D001514 ORTHO05D005209 8.0e-89 330.9 223 70.0
Haze_25985 Corylus avellana HOM05D001514 ORTHO05D005209 1.4e-88 330.1 260 62.7
Haze_25993 Corylus avellana HOM05D001514 ORTHO05D005209 1.4e-88 330.1 260 62.7
Gorai.013G225400 Gossypium raimondii HOM05D001514 ORTHO05D005209 1.4e-88 330.1 223 70.0
Hund08725 Selenicereus undatus HOM05D001514 ORTHO05D005209 5.2e-88 328.2 215 69.3
GSVIVG01015097001 Vitis vinifera HOM05D001514 ORTHO05D005209 6.8e-88 327.8 224 68.8
ClCG11G001470 Citrullus lanatus HOM05D001514 ORTHO05D005209 1.3e-86 323.6 237 67.5
FvH4_1g08420 Fragaria vesca HOM05D001514 ORTHO05D005209 8.3e-86 320.9 218 66.1
Aa31sc437G10 Aethionema arabicum HOM05D001514 ORTHO05D005209 1.4e-85 320.1 218 67.9
Thhalv10002659m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 1.8e-85 319.7 218 68.3
Sed0009954 Sechium edule HOM05D001514 ORTHO05D005209 2.4e-85 319.3 219 70.3
AL4G21890 Arabidopsis lyrata HOM05D001514 ORTHO05D005209 3.2e-85 318.9 218 67.0
Sabra06G0113700 Salix brachista HOM05D001514 ORTHO05D005209 4.1e-85 318.5 251 63.3
MELO3C004649.2 Cucumis melo HOM05D001514 ORTHO05D005209 2.7e-84 315.8 226 69.5
Lj4g0013364 Lotus japonicus HOM05D001514 ORTHO05D005209 4.6e-84 315.1 215 68.4
Sp4g11040 Schrenkiella parvula HOM05D001514 ORTHO05D005209 5.9e-84 314.7 218 67.0
PGR142G1966 Punica granatum HOM05D001514 ORTHO05D005209 7.8e-84 314.3 223 67.7
AT2G28230 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 2.3e-83 312.8 218 66.1
vmacro06328 Vaccinium macrocarpon HOM05D001514 ORTHO05D005209 3.9e-83 312.0 253 62.1
BcaB02g10157 Brassica carinata HOM05D001514 ORTHO05D005209 8.6e-83 310.8 217 66.8
Peaxi162Scf00928g00034 Petunia axillaris HOM05D001514 ORTHO05D005209 8.6e-83 310.8 218 70.6
RcHm_v2.0_Chr2g0094521 Rosa chinensis HOM05D001514 ORTHO05D005209 1.1e-82 310.5 215 67.4
BcaC02g10956 Brassica carinata HOM05D001514 ORTHO05D005209 1.5e-82 310.1 217 66.4
C04p23290 Brassica napus HOM05D001514 ORTHO05D005209 1.5e-82 310.1 217 66.4
Carub.0004s0911 Capsella rubella HOM05D001514 ORTHO05D005209 1.5e-82 310.1 218 65.6
THA.LOC104826585 Tarenaya hassleriana HOM05D001514 ORTHO05D005209 1.9e-82 309.7 243 62.6
A07p18760 Brassica napus HOM05D001514 ORTHO05D005209 2.8e-81 305.8 215 65.6
ATR0598G338 Amborella trichopoda HOM05D001514 ORTHO05D005209 3.6e-81 305.4 213 65.3
Glyma.17G050300 Glycine max HOM05D001514 ORTHO05D005209 4.7e-81 305.1 221 63.8
Psat4g016720 Pisum sativum HOM05D001514 ORTHO05D005209 2.3e-80 302.8 219 63.9
Glyma.13G109300 Glycine max HOM05D001514 ORTHO05D005209 4.0e-80 302.0 215 65.1
Carub.0004s0910 Capsella rubella HOM05D001514 ORTHO05D005209 1.2e-79 300.4 218 62.8
BolC4t23831H Brassica oleracea HOM05D001514 ORTHO05D005209 3.4e-79 298.9 212 66.5
Ca_21314_v3 Cicer arietinum L. HOM05D001514 ORTHO05D005209 4.4e-79 298.5 218 61.9
Phvul.003G131900 Phaseolus vulgaris HOM05D001514 ORTHO05D005209 2.2e-78 296.2 215 65.6
AUR62028988 Chenopodium quinoa HOM05D001514 ORTHO05D005209 2.9e-78 295.8 202 66.8
PSO210G4222 Papaver somniferum HOM05D001514 ORTHO05D005209 6.4e-78 294.7 215 64.2
Aqoxy7G01056 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 1.1e-77 293.9 218 61.5
BraA07t29585Z Brassica rapa HOM05D001514 ORTHO05D005209 1.1e-77 293.9 210 65.7
CDE05G2440 Ceratophyllum demersum HOM05D001514 ORTHO05D005209 1.9e-77 293.1 217 61.8
TPR.G9427 Trifolium pratense HOM05D001514 ORTHO05D005209 1.9e-77 293.1 217 63.6
Lalb_Chr07g0181101 Lupinus albus HOM05D001514 ORTHO05D005209 2.4e-77 292.7 223 60.5
PSO386G0176 Papaver somniferum HOM05D001514 ORTHO05D005209 4.1e-77 292.0 215 63.3
Solyc10g049510.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.4e-77 291.6 216 62.5
arahy.Tifrunner.gnm1.ann1.0DN5L0 Arachis hypogaea HOM05D001514 ORTHO05D005209 7.0e-77 291.2 215 60.9
arahy.Tifrunner.gnm1.ann1.0TW07M Arachis hypogaea HOM05D001514 ORTHO05D005209 7.0e-77 291.2 215 60.9
arahy.Tifrunner.gnm1.ann1.I7BKR8 Arachis hypogaea HOM05D001514 ORTHO05D005209 7.0e-77 291.2 215 60.9
Medtr4g125510 Medicago truncatula HOM05D001514 ORTHO05D005209 9.2e-77 290.8 215 62.3
HPP92_009229 Vanilla planifolia HOM05D001514 ORTHO05D005209 1.2e-76 290.4 212 62.3
Aqoxy7G01057 Aquilegia oxysepala HOM05D001514 ORTHO05D005209 3.5e-76 288.9 218 60.1
Solyc10g054950.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 6.0e-76 288.1 215 61.9
Medtr2g063927 Medicago truncatula HOM05D001514 ORTHO05D005209 1.7e-75 286.6 215 61.4
AT4G09070 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 1.1e-74 283.9 216 60.6
VMungo1215G3125 Vigna mungo HOM05D001514 ORTHO05D005209 2.5e-74 282.7 202 65.8
Thhalv10017586m.g Eutrema salsugineum HOM05D001514 ORTHO05D005209 1.2e-71 273.9 218 60.6
Os09g0443500 Oryza sativa ssp. japonica HOM05D001514 ORTHO05D005209 4.4e-71 271.9 222 55.9
Zm00001eb314270 Zea mays HOM05D001514 ORTHO05D005209 5.8e-71 271.6 217 56.2
Actinidia29922 Actinidia chinensis HOM05D001514 ORTHO05D005209 1.7e-70 270.0 180 68.9
PGSC0003DMG400027872 Solanum tuberosum HOM05D001514 ORTHO05D005209 2.1e-68 263.1 189 64.0
Solyc10g055100.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.1e-65 253.1 215 56.3
CANSAT11G2059 Cannabis sativa HOM05D001514 ORTHO05D005209 4.7e-65 251.9 170 70.6
Sabra06G0112300 Salix brachista HOM05D001514 ORTHO05D005209 4.7e-65 251.9 170 71.8
Solyc10g055160.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 4.7e-65 251.9 185 62.7
Rhsim03G0229200 Rhododendron simsii HOM05D001514 ORTHO05D005209 8.1e-65 251.1 171 70.2
CARHR121150 Cardamine hirsuta HOM05D001514 ORTHO05D005209 4.0e-64 248.8 218 55.0
Solyc10g055020.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.8e-63 245.0 221 54.3
unitig_749.g14240 Utricularia gibba HOM05D001514 ORTHO05D005209 6.4e-62 241.5 151 78.1
Actinidia38471 Actinidia chinensis HOM05D001514 ORTHO05D005209 8.4e-62 241.1 224 56.2
Carub.0006s2765 Capsella rubella HOM05D001514 ORTHO05D005209 8.4e-62 241.1 212 47.6
Sc08g0008840 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.1e-61 240.7 168 69.0
Sc08g0009330 Simmondsia chinensis HOM05D001514 ORTHO05D005209 1.1e-61 240.7 168 69.0
CAN.G1963.7 Capsicum annuum HOM05D001514 ORTHO05D005209 1.4e-61 240.4 164 71.3
FAN26G1993 Fragaria x ananassa HOM05D001514 ORTHO05D005209 2.4e-61 239.6 166 66.9
Solyc10g054980.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 2.7e-60 236.1 213 55.4
PGSC0003DMG400024425 Solanum tuberosum HOM05D001514 ORTHO05D005209 1.1e-58 230.7 169 62.7
DCAR_024739 Daucus carota HOM05D001514 ORTHO05D005209 4.3e-58 228.8 141 74.5
SMO141G0192 Selaginella moellendorffii HOM05D001514 ORTHO05D005209 4.3e-58 228.8 210 51.9
FAN26G0729 Fragaria x ananassa HOM05D001514 ORTHO05D005209 9.6e-58 227.6 186 59.7
Nitab4.5_0000073g0220 Nicotiana tabacum HOM05D001514 ORTHO05D005209 4.7e-57 225.3 136 77.9
Mapoly0097s0017 Marchantia polymorpha HOM05D001514 ORTHO05D005209 6.2e-57 224.9 208 47.6
CAN.G299.3 Capsicum annuum HOM05D001514 ORTHO05D005209 1.1e-56 224.2 127 85.0
CAN.G2532.1 Capsicum annuum HOM05D001514 ORTHO05D005209 2.4e-56 223.0 167 64.1
DCAR_026438 Daucus carota HOM05D001514 ORTHO05D005209 6.4e-54 214.9 142 70.4
Sopen10g024920 Solanum pennellii HOM05D001514 ORTHO05D005209 8.4e-54 214.5 175 58.9
PGSC0003DMG400040125 Solanum tuberosum HOM05D001514 ORTHO05D005209 3.9e-51 205.7 211 49.3
Psat0s2317g0240 Pisum sativum HOM05D001514 ORTHO05D005209 9.6e-50 201.1 211 45.5
CAN.G1774.14 Capsicum annuum HOM05D001514 ORTHO05D005209 3.6e-49 199.1 146 67.8
Solyc10g055070.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 4.8e-49 198.7 163 57.7
PGSC0003DMG400003348 Solanum tuberosum HOM05D001514 ORTHO05D005209 2.4e-48 196.4 131 70.2
Psat0s4474g0080 Pisum sativum HOM05D001514 ORTHO05D005209 2.6e-47 193.0 211 42.7
Pp3c7_2780 Physcomitrium patens HOM05D001514 ORTHO05D005209 4.5e-47 192.2 208 41.3
AagrBONN_evm.TU.Sc2ySwM_344.5098 Anthoceros agrestis HOM05D001514 ORTHO05D005209 7.6e-47 191.4 191 49.7
CBR_g11153 Chara braunii HOM05D001514 ORTHO05D005209 1.4e-45 187.2 220 39.1
Solyc10g055010.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.6e-44 183.7 143 58.0
Solyc10g055150.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 1.0e-43 181.0 133 66.2
Sopen10g024960 Solanum pennellii HOM05D001514 ORTHO05D005209 3.9e-43 179.1 123 68.3
Solyc10g049550.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.3e-42 176.0 134 62.7
Manes.15G009400 Manihot esculenta HOM05D001514 ORTHO05D005209 4.5e-39 165.6 128 68.0
Solyc10g055130.2 Solanum lycopersicum HOM05D001514 ORTHO05D005209 5.8e-39 165.2 118 64.4
MD02G1088400 Malus domestica HOM05D001514 ORTHO05D005209 1.9e-37 160.2 166 48.8
Sopen10g024890 Solanum pennellii HOM05D001514 ORTHO05D005209 3.9e-35 152.5 101 69.3
DCAR_024738 Daucus carota HOM05D001514 ORTHO05D005209 9.3e-29 131.3 76 77.6
Sopen10g024880 Solanum pennellii HOM05D000004 ORTHO05D000002 8.7e-27 124.8 91 65.9
Sopen12g011120 Solanum pennellii HOM05D001514 ORTHO05D005209 4.3e-26 122.5 81 67.9
Potri.005G126902 Populus trichocarpa HOM05D001514 ORTHO05D005209 1.0e-19 101.3 83 62.7
Solyc10g055040.3 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.0e-19 99.8 143 38.5
Oeu055661.2 Olea europaea HOM05D001514 ORTHO05D005209 1.1e-18 97.8 62 69.4
Solyc12g062270.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 3.3e-18 96.3 106 48.1
Rhsim03G0228900 Rhododendron simsii HOM05D001514 ORTHO05D005209 5.7e-18 95.5 72 58.3
CAN.G1963.4 Capsicum annuum HOM05D001514 ORTHO05D005209 8.2e-17 91.7 130 40.0
AT2G28020 Arabidopsis thaliana HOM05D001514 ORTHO05D005209 1.6e-12 77.4 67 58.2
Cre11.g476900 Chlamydomonas reinhardtii HOM05D001514 ORTHO05D005209 2.7e-12 76.6 163 30.1
ECA233G2563 Erigeron canadensis HOM05D000517 ORTHO05D000751 3.0e-11 73.2 102 41.2
Solyc10g055030.1 Solanum lycopersicum HOM05D001514 ORTHO05D005209 8.2e-09 65.1 49 59.2
BcaC07g40291 Brassica carinata HOM05D001514 ORTHO05D005209 2.6e-07 60.1 44 65.9
C08p34050 Brassica napus HOM05D001514 ORTHO05D005209 2.6e-07 60.1 44 65.9
BolC8t51003H Brassica oleracea HOM05D001514 ORTHO05D005209 3.4e-07 59.7 43 67.4


User provided reference genes

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