Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 3.5e-130 468.4 253 100.0
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.4e-102 375.9 260 73.8
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 8.2e-87 324.3 262 64.9
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 1.1e-86 323.9 212 75.0
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 1.4e-86 323.6 217 73.3
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 1.8e-86 323.2 211 74.9
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 6.9e-86 321.2 214 72.9
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 6.9e-86 321.2 252 65.5
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 9.1e-86 320.9 254 64.6
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 5.9e-85 318.2 253 63.2
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.7e-84 316.6 257 63.4
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 8.5e-84 314.3 214 71.0
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 8.5e-84 314.3 253 62.5
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 8.5e-84 314.3 212 73.6
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 1.9e-83 313.2 212 68.9
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 3.2e-83 312.4 211 72.0
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.2e-83 312.4 276 59.8
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 4.2e-83 312.0 212 68.4
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.5e-83 311.6 214 70.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 7.2e-83 311.2 214 70.1
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 9.4e-83 310.8 255 61.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 2.1e-82 309.7 216 69.4
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 3.6e-82 308.9 214 69.6
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 7.9e-82 307.8 214 69.2
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 2.3e-81 306.2 214 69.6
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 2.3e-81 306.2 257 70.8
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 3.0e-81 305.8 221 68.8
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 3.0e-81 305.8 214 68.7
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 3.0e-81 305.8 214 68.7
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.9e-81 305.4 210 69.5
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 6.7e-81 304.7 210 71.4
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 6.7e-81 304.7 211 70.1
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 6.7e-81 304.7 253 59.7
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 6.7e-81 304.7 215 67.4
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.5e-80 303.5 213 68.1
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.6e-80 302.8 253 60.5
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.6e-80 302.8 228 66.7
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.4e-80 302.0 215 68.4
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 5.7e-80 301.6 212 70.3
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 7.4e-80 301.2 257 59.9
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.3e-79 300.4 214 68.2
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.3e-79 300.4 211 69.7
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 1.3e-79 300.4 215 66.5
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.7e-79 300.1 214 67.8
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.2e-79 299.7 258 59.3
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.8e-79 299.3 212 67.0
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 3.7e-79 298.9 213 69.0
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.8e-79 298.5 254 60.6
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 8.2e-79 297.7 251 59.0
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 1.1e-78 297.4 251 59.0
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.1e-78 297.4 254 60.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.1e-78 297.4 254 60.6
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 1.8e-78 296.6 212 66.5
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.1e-78 295.4 211 66.4
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 5.3e-78 295.0 211 67.3
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 5.3e-78 295.0 210 68.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 5.3e-78 295.0 256 60.9
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 6.9e-78 294.7 210 68.6
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 9.1e-78 294.3 254 60.2
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 1.5e-77 293.5 210 67.6
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.1e-75 287.3 236 60.6
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.1e-75 287.3 211 65.9
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.4e-75 287.0 194 70.1
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.9e-75 286.6 247 58.7
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 2.5e-75 286.2 210 64.8
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 3.2e-75 285.8 215 64.7
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 4.2e-75 285.4 194 69.6
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 5.5e-75 285.0 208 66.8
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 5.5e-75 285.0 243 61.3
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 7.2e-75 284.6 210 64.3
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.2e-74 283.9 194 68.6
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 1.2e-74 283.9 209 64.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 4.7e-74 282.0 208 66.8
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 1.4e-73 280.4 210 65.2
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 2.3e-73 279.6 198 66.2
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 8.8e-73 277.7 237 59.1
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 7.4e-72 274.6 210 63.3
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 1.3e-71 273.9 209 63.2
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 4.8e-71 271.9 212 60.4
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 6.3e-71 271.6 209 63.6
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 6.3e-71 271.6 209 63.6
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.2e-71 271.2 213 65.3
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 1.1e-70 270.8 212 60.8
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 1.4e-70 270.4 211 60.2
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 2.4e-70 269.6 211 60.7
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 7.7e-69 264.6 288 52.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 1.0e-68 264.2 215 60.5
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.9e-68 262.7 349 43.6
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 8.5e-68 261.2 212 59.0
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 3.2e-67 259.2 210 61.9
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 5.5e-67 258.5 216 59.7
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 9.4e-67 257.7 224 59.8
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 3.0e-65 252.7 210 62.4
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 4.0e-65 252.3 176 67.0
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 7.5e-64 248.1 194 62.4
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 3.6e-58 229.2 154 72.7
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 4.0e-57 225.7 214 57.5
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.0e-52 211.1 403 35.0
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 6.5e-52 208.4 135 68.9
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 4.9e-47 192.2 160 58.8
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 3.8e-44 182.6 192 44.8
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 4.3e-43 179.1 217 47.0
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.2e-37 161.0 135 64.4
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 2.8e-34 149.8 192 42.2
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 7.0e-30 135.2 217 40.1
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 3.5e-29 132.9 135 50.4
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.7e-28 130.6 98 60.2
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 3.3e-27 126.3 93 61.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 5.8e-24 115.5 217 32.7
Pp3c1_38430 Physcomitrium patens HOM05D006635 ORTHO05D008047 3.7e-23 112.8 218 32.6
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.4e-22 110.9 117 57.3
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 5.1e-20 102.4 91 52.7
Oeu058884.1 Olea europaea HOM05D001680 ORTHO05D001596 1.1e-19 101.3 74 71.6
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.1e-17 94.7 131 43.5
CBR_g33918 Chara braunii HOM05D006635 ORTHO05D008047 1.4e-17 94.4 149 35.6
SEGI_02340 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 7.6e-16 88.6 76 67.1
AT1G61410 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 9.9e-16 88.2 120 46.7
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 4.1e-14 82.8 53 66.0
C01p40960 Brassica napus HOM05D006635 ORTHO05D008047 3.0e-12 76.6 86 52.3
Pp3c10_9830 Physcomitrium patens HOM05D000160 ORTHO05D000496 6.6e-12 75.5 143 32.2
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 8.7e-12 75.1 50 64.0
Thhalv10021924m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 4.3e-11 72.8 73 54.8
Pp3c3_5070 Physcomitrium patens HOM05D000160 ORTHO05D000496 4.7e-10 69.3 170 28.8
Pp3c13_7410 Physcomitrium patens HOM05D000160 ORTHO05D000496 5.2e-09 65.9 160 30.0
Pp3c19_13839 Physcomitrium patens HOM05D006635 ORTHO05D008047 4.9e-07 59.3 100 37.0
AagrBONN_evm.TU.Sc2ySwM_368.876 Anthoceros agrestis HOM05D006635 ORTHO05D008047 6.4e-07 58.9 162 29.0


User provided reference genes

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