Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.3663 Avicennia marina HOM05D006560 ORTHO05D008164 0.0e+00 1126.7 573 100.0
Migut.K01188 Erythranthe guttata HOM05D006560 ORTHO05D008164 3.7e-212 741.9 576 68.8
SalBow5G2177 Salvia bowleyana HOM05D006560 ORTHO05D008164 4.6e-202 708.4 615 62.8
SGA_v2.0_scaffold45G17096 Striga asiatica HOM05D006560 ORTHO05D008164 3.3e-192 675.6 582 64.1
Cc07_g12560 Coffea canephora HOM05D006560 ORTHO05D008164 8.2e-159 564.7 578 54.5
CAN.G809.82 Capsicum annuum HOM05D006560 ORTHO05D008164 1.9e-155 553.5 575 53.9
Solyc02g081520.3 Solanum lycopersicum HOM05D006560 ORTHO05D008164 2.6e-149 533.1 559 53.7
Actinidia22879 Actinidia chinensis HOM05D006560 ORTHO05D008164 7.2e-147 525.0 581 51.5
TAR629G1839 Trochodendron aralioides HOM05D006560 ORTHO05D008164 1.4e-142 510.8 581 50.9
GSVIVG01033201001 Vitis vinifera HOM05D006560 ORTHO05D008164 1.4e-142 510.8 596 49.7
DCAR_014134 Daucus carota HOM05D006560 ORTHO05D008164 1.8e-142 510.4 591 49.7
Nitab4.5_0000108g0060 Nicotiana tabacum HOM05D006560 ORTHO05D008164 2.6e-141 506.5 544 54.4
Migut.L00953 Erythranthe guttata HOM05D006560 ORTHO05D008164 8.5e-140 501.5 442 63.1
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 6.1e-138 495.4 563 50.1
Cfa008016 Carpinus fangiana HOM05D006560 ORTHO05D008164 7.9e-138 495.0 580 49.5
CANSAT64G2566 Cannabis sativa HOM05D006560 ORTHO05D008164 1.4e-137 494.2 582 48.8
Aqoxy3G04298 Aquilegia oxysepala HOM05D006560 ORTHO05D008164 1.8e-137 493.8 584 47.6
Atru.chr1.2184 Acer truncatum HOM05D006560 ORTHO05D008164 2.3e-137 493.4 581 49.2
Manes.01G126500 Manihot esculenta HOM05D006560 ORTHO05D008164 2.6e-136 490.0 581 50.1
Haze_14043 Corylus avellana HOM05D006560 ORTHO05D008164 1.3e-135 487.6 607 47.9
CiPaw.04G006800 Carya illinoinensis HOM05D006560 ORTHO05D008164 8.2e-135 485.0 578 48.4
QL02p055474 Quercus lobata HOM05D006560 ORTHO05D008164 7.0e-134 481.9 546 50.9
Potri.015G148300 Populus trichocarpa HOM05D006560 ORTHO05D008164 1.0e-132 478.0 583 48.7
Eucgr.B03794 Eucalyptus grandis HOM05D006560 ORTHO05D008164 1.4e-131 474.2 591 47.7
PSO782G5584 Papaver somniferum HOM05D006560 ORTHO05D008164 1.9e-131 473.8 583 47.2
TWI77G0885 Tripterygium wilfordii HOM05D006560 ORTHO05D008164 1.9e-131 473.8 581 48.9
PSO063G7212 Papaver somniferum HOM05D006560 ORTHO05D008164 4.2e-131 472.6 585 47.9
Migut.L00936 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.6e-130 470.7 423 61.7
QL02p056517 Quercus lobata HOM05D006560 ORTHO05D008164 3.9e-129 466.1 720 41.7
Prupe.8G267600 Prunus persica HOM05D006560 ORTHO05D008164 1.1e-128 464.5 579 47.7
Lalb_Chr17g0345771 Lupinus albus HOM05D006560 ORTHO05D008164 1.5e-128 464.2 578 46.7
RcHm_v2.0_Chr7g0242051 Rosa chinensis HOM05D006560 ORTHO05D008164 1.5e-128 464.2 580 47.6
PGR102G0946 Punica granatum HOM05D006560 ORTHO05D008164 7.4e-128 461.8 581 48.2
Medtr5g076180 Medicago truncatula HOM05D006560 ORTHO05D008164 1.3e-127 461.1 581 46.3
Thecc.04G055900 Theobroma cacao HOM05D006560 ORTHO05D008164 1.7e-127 460.7 582 47.6
PGSC0003DMG400017739 Solanum tuberosum HOM05D006560 ORTHO05D008164 2.8e-127 459.9 593 48.1
FvH4_5g39750 Fragaria vesca HOM05D006560 ORTHO05D008164 3.7e-127 459.5 581 47.0
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea HOM05D006560 ORTHO05D008164 1.4e-126 457.6 578 46.5
Glyma.14G208100 Glycine max HOM05D006560 ORTHO05D008164 1.4e-126 457.6 579 47.3
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea HOM05D006560 ORTHO05D008164 1.8e-126 457.2 582 47.6
HanXRQChr16g0532681 Helianthus annuus HOM05D006560 ORTHO05D008164 3.1e-126 456.4 576 47.0
Phvul.008G242800 Phaseolus vulgaris HOM05D006560 ORTHO05D008164 3.1e-126 456.4 579 45.8
Lsat_1_v5_gn_3_69681 Lactuca sativa HOM05D006560 ORTHO05D008164 2.0e-125 453.8 563 48.8
COL.COLO4_13435 Corchorus olitorius HOM05D006560 ORTHO05D008164 2.2e-124 450.3 599 45.9
MD09G1187400 Malus domestica HOM05D006560 ORTHO05D008164 6.5e-124 448.7 581 46.6
VMungo0647G2139 Vigna mungo HOM05D006560 ORTHO05D008164 8.5e-124 448.4 577 46.4
ECA246G0244 Erigeron canadensis HOM05D006560 ORTHO05D008164 5.5e-123 445.7 575 45.6
Duzib138G1900 Durio zibethinus HOM05D006560 ORTHO05D008164 7.2e-123 445.3 585 47.0
Psat2g048560 Pisum sativum HOM05D006560 ORTHO05D008164 1.0e-121 441.4 578 45.8
Ca_05740_v3 Cicer arietinum L. HOM05D006560 ORTHO05D008164 7.5e-120 435.3 583 44.8
Gohir.A12G053000 Gossypium hirsutum HOM05D006560 ORTHO05D008164 7.5e-120 435.3 583 46.3
LjContig00141g0007295 Lotus japonicus HOM05D006560 ORTHO05D008164 1.7e-119 434.1 582 45.9
vmacro20436 Vaccinium macrocarpon HOM05D006560 ORTHO05D008164 8.2e-119 431.8 550 48.2
TPR.G15397 Trifolium pratense HOM05D006560 ORTHO05D008164 1.1e-118 431.4 606 44.2
Gorai.008G054800 Gossypium raimondii HOM05D006560 ORTHO05D008164 5.3e-118 429.1 580 46.4
Gohir.D12G051500 Gossypium hirsutum HOM05D006560 ORTHO05D008164 5.9e-117 425.6 582 46.0
Nitab4.5_0003580g0010 Nicotiana tabacum HOM05D006560 ORTHO05D008164 1.3e-116 424.5 505 50.7
Sabra16G0321300 Salix brachista HOM05D006560 ORTHO05D008164 1.3e-116 424.5 630 43.5
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 2.9e-116 423.3 698 40.8
Lj4A249G52 Lonicera japonica HOM05D006560 ORTHO05D008164 4.2e-115 419.5 511 49.9
CsaV3_3G021130 Cucumis sativus L. HOM05D006560 ORTHO05D008164 1.6e-114 417.5 583 44.3
Sabra16G0322200 Salix brachista HOM05D006560 ORTHO05D008164 1.0e-113 414.8 611 43.5
AUR62038458 Chenopodium quinoa HOM05D006560 ORTHO05D008164 1.4e-113 414.5 588 45.6
ClCG05G011330 Citrullus lanatus HOM05D006560 ORTHO05D008164 1.8e-113 414.1 582 44.3
MELO3C020249.2 Cucumis melo HOM05D006560 ORTHO05D008164 1.8e-113 414.1 582 44.3
Hund12951 Selenicereus undatus HOM05D006560 ORTHO05D008164 3.0e-113 413.3 566 46.1
EL10Ac6g14054 Beta vulgaris HOM05D006560 ORTHO05D008164 3.1e-110 403.3 556 44.6
Sabra15G0156900 Salix brachista HOM05D006560 ORTHO05D008164 3.1e-110 403.3 596 43.5
AUR62014236 Chenopodium quinoa HOM05D006560 ORTHO05D008164 5.4e-110 402.5 552 46.2
Dinv28275 Davidia involucrata HOM05D006560 ORTHO05D008164 2.7e-109 400.2 523 44.9
Sp3g01710 Schrenkiella parvula HOM05D006560 ORTHO05D008164 1.1e-107 394.8 587 40.5
Sed0010007 Sechium edule HOM05D006560 ORTHO05D008164 1.1e-107 394.8 582 43.1
AL3G12070 Arabidopsis lyrata HOM05D006560 ORTHO05D008164 2.1e-106 390.6 585 40.5
CARHR076680 Cardamine hirsuta HOM05D006560 ORTHO05D008164 7.5e-104 382.1 583 40.0
Aa31LG5G13150 Aethionema arabicum HOM05D006560 ORTHO05D008164 2.8e-103 380.2 620 38.9
Ah.14g086100 Amaranthus hybridus HOM05D006560 ORTHO05D008164 2.4e-102 377.1 585 42.4
A05p44410 Brassica napus HOM05D006560 ORTHO05D008164 5.4e-102 375.9 587 38.5
Oeu060825.3 Olea europaea HOM05D006560 ORTHO05D008164 9.5e-99 365.2 511 46.6
Sc09g0004640 Simmondsia chinensis HOM05D006560 ORTHO05D008164 1.2e-98 364.8 523 43.2
Carub.0003s0178 Capsella rubella HOM05D006560 ORTHO05D008164 1.6e-98 364.4 584 37.8
Thhalv10020468m.g Eutrema salsugineum HOM05D006560 ORTHO05D008164 1.3e-95 354.8 586 37.9
HPP92_015158 Vanilla planifolia HOM05D006560 ORTHO05D008164 3.2e-94 350.1 582 38.8
AT3G02680 Arabidopsis thaliana HOM05D006560 ORTHO05D008164 1.6e-93 347.8 582 37.5
BcaC05g30516 Brassica carinata HOM05D006560 ORTHO05D008164 3.5e-93 346.7 585 36.9
Os10g0487300 Oryza sativa ssp. japonica HOM05D006560 ORTHO05D008164 3.9e-92 343.2 581 38.6
MBI03_g13822_MAGBIO Magnolia biondii HOM05D006560 ORTHO05D008164 8.6e-92 342.0 531 41.8
BolC5t35073H Brassica oleracea HOM05D006560 ORTHO05D008164 1.1e-91 341.7 586 36.9
BraA06t23296Z Brassica rapa HOM05D006560 ORTHO05D008164 6.2e-90 335.9 583 35.0
unitig_748.g7016 Utricularia gibba HOM05D006560 ORTHO05D008164 1.2e-85 321.6 557 40.4
C09p75830 Brassica napus HOM05D006560 ORTHO05D008164 3.5e-85 320.1 568 36.3
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.9e-83 314.3 443 43.3
Glyma.02G239200 Glycine max HOM05D006560 ORTHO05D008164 3.1e-81 307.0 486 41.6
Peaxi162Scf00344g01815 Petunia axillaris HOM05D006560 ORTHO05D008164 3.4e-80 303.5 480 44.2
Zm00001eb221260 Zea mays HOM05D006560 ORTHO05D008164 5.8e-80 302.8 576 36.3
ATR0618G008 Amborella trichopoda HOM05D006560 ORTHO05D008164 3.7e-79 300.1 524 38.4
SEGI_37812 Sequoiadendron giganteum HOM05D006560 ORTHO05D008164 3.2e-78 297.0 596 37.8
BcaC05g30567 Brassica carinata HOM05D006560 ORTHO05D008164 4.6e-69 266.5 335 40.9
Sopen02g026150 Solanum pennellii HOM05D006560 ORTHO05D008164 5.1e-68 263.1 360 46.4
Ciclev10012792m.g Citrus clementina HOM05D006560 ORTHO05D008164 9.6e-67 258.8 202 60.9
Cpa.g.sc108.22 Carica papaya HOM05D006560 ORTHO05D008164 4.7e-66 256.5 416 41.3
SHI09016 Sapria himalayana HOM05D006560 ORTHO05D008164 1.4e-65 255.0 372 41.4
Nn3g18627 Nelumbo nucifera HOM05D006560 ORTHO05D008164 3.0e-60 237.3 191 59.2
CDE04G3361 Ceratophyllum demersum HOM05D006560 ORTHO05D008164 5.1e-60 236.5 437 38.0
CSS0021055 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.8e-56 223.0 218 52.3
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.8e-52 211.5 148 68.9
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla HOM05D006560 ORTHO05D008164 1.1e-51 208.8 148 68.2
Migut.L00937 Erythranthe guttata HOM05D006560 ORTHO05D008164 1.9e-51 208.0 119 81.5
Migut.L00946 Erythranthe guttata HOM05D006560 ORTHO05D008164 7.4e-51 206.1 144 71.5
FAN08G2099 Fragaria x ananassa HOM05D006560 ORTHO05D008164 1.1e-43 182.2 137 67.2
CSS0034206 Camellia sinensis var. sinensis HOM05D006560 ORTHO05D008164 9.0e-41 172.6 251 46.6
Ciclev10013450m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.0e-40 171.4 311 39.9
SMO169G0207 Selaginella moellendorffii HOM05D006560 ORTHO05D008164 3.4e-40 170.6 597 27.8
Pp3c4_14090 Physcomitrium patens HOM05D006560 ORTHO05D008164 9.0e-33 146.0 632 26.3
TPR.G36125 Trifolium pratense HOM05D006560 ORTHO05D008164 1.5e-27 128.6 121 57.0
Migut.L00945 Erythranthe guttata HOM05D006560 ORTHO05D008164 5.5e-22 110.2 65 80.0
Nn3g18626 Nelumbo nucifera HOM05D006560 ORTHO05D008164 1.4e-20 105.5 71 74.6
FAN18G2665 Fragaria x ananassa HOM05D006560 ORTHO05D008164 4.1e-17 94.0 71 59.2
CBR_g29321 Chara braunii HOM05D006560 ORTHO05D008164 7.2e-14 83.2 192 30.7
Ciclev10013286m.g Citrus clementina HOM05D006560 ORTHO05D008164 2.9e-07 61.2 58 50.0
Dinv24123 Davidia involucrata HOM05D006560 ORTHO05D008164 1.5e-06 58.9 30 86.7
Cfa006566 Carpinus fangiana HOM05D003924 ORTHO05D043563 3.2e-06 57.8 60 50.0


User provided reference genes

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