Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27230 Avicennia marina HOM05D005564 ORTHO05D006872 1.6e-163 579.3 289 100.0
Migut.F00541 Erythranthe guttata HOM05D005564 ORTHO05D006872 6.6e-117 424.5 292 71.9
SGA_v2.0_scaffold60G20845 Striga asiatica HOM05D005564 ORTHO05D006872 2.4e-111 406.0 289 69.6
SalBow3G4594 Salvia bowleyana HOM05D005564 ORTHO05D006872 1.1e-106 390.6 287 69.0
Oeu030874.1 Olea europaea HOM05D005564 ORTHO05D006872 2.3e-101 372.9 290 64.5
Hma1.2p1_1014F.1_g247960 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.5e-100 370.2 291 63.9
Hma1.2p1_1305F.1_g274526 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.5e-100 370.2 291 63.9
Duzib084G1177 Durio zibethinus HOM05D005564 ORTHO05D006872 2.0e-97 359.8 292 63.0
Gorai.001G052100 Gossypium raimondii HOM05D005564 ORTHO05D006872 4.9e-96 355.1 293 62.1
Gohir.D07G048900 Gossypium hirsutum HOM05D005564 ORTHO05D006872 6.5e-96 354.8 293 61.8
Sabra15G0133100 Salix brachista HOM05D005564 ORTHO05D006872 1.1e-95 354.0 292 60.3
Manes.06G130000 Manihot esculenta HOM05D005564 ORTHO05D006872 1.4e-95 353.6 293 62.1
FvH4_7g26720 Fragaria vesca HOM05D005564 ORTHO05D006872 9.3e-95 350.9 289 62.3
Cfa013601 Carpinus fangiana HOM05D005564 ORTHO05D006872 1.2e-94 350.5 291 62.2
Gohir.A13G032000 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.7e-94 349.4 295 62.0
Thecc.03G145600 Theobroma cacao HOM05D005564 ORTHO05D006872 1.8e-93 346.7 291 61.5
CSS0008072 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 3.9e-93 345.5 292 60.6
Cpa.g.sc13.231 Carica papaya HOM05D005564 ORTHO05D006872 6.7e-93 344.7 296 61.5
Gorai.005G129900 Gossypium raimondii HOM05D005564 ORTHO05D006872 6.7e-93 344.7 295 60.7
HanXRQChr08g0221891 Helianthus annuus HOM05D005564 ORTHO05D006872 1.5e-92 343.6 283 61.5
Potri.015G111628 Populus trichocarpa HOM05D005564 ORTHO05D006872 1.5e-92 343.6 291 59.8
Gorai.007G289400 Gossypium raimondii HOM05D005564 ORTHO05D006872 2.5e-92 342.8 294 60.2
Lj8A49G34 Lonicera japonica HOM05D005564 ORTHO05D006872 4.3e-92 342.0 300 60.7
HanXRQChr08g0223121 Helianthus annuus HOM05D005564 ORTHO05D006872 9.7e-92 340.9 283 61.5
TWI39G1038 Tripterygium wilfordii HOM05D005564 ORTHO05D006872 1.3e-91 340.5 290 59.7
Ciclev10032148m.g Citrus clementina HOM05D005564 ORTHO05D006872 2.2e-91 339.7 320 55.0
GSVIVG01024470001 Vitis vinifera HOM05D005564 ORTHO05D006872 4.8e-91 338.6 289 59.9
Nitab4.5_0003973g0040 Nicotiana tabacum HOM05D005564 ORTHO05D006872 4.1e-90 335.5 292 58.2
TAR629G2772 Trochodendron aralioides HOM05D005564 ORTHO05D006872 1.5e-89 333.6 294 58.5
vmacro19959 Vaccinium macrocarpon HOM05D005564 ORTHO05D006872 1.5e-89 333.6 288 60.4
BraSC35t46004Z Brassica rapa HOM05D005564 ORTHO05D006872 2.6e-89 332.8 294 56.5
A10p07960 Brassica napus HOM05D005564 ORTHO05D006872 5.9e-89 331.6 294 56.1
Lj1g0017373 Lotus japonicus HOM05D005564 ORTHO05D006872 5.9e-89 331.6 284 59.5
Sp6g13380 Schrenkiella parvula HOM05D005564 ORTHO05D006872 1.0e-88 330.9 295 57.3
C09p39850 Brassica napus HOM05D005564 ORTHO05D006872 1.7e-88 330.1 294 56.1
BcaC04g20726 Brassica carinata HOM05D005564 ORTHO05D006872 3.8e-88 328.9 294 55.8
BolC9t56884H Brassica oleracea HOM05D005564 ORTHO05D006872 3.8e-88 328.9 294 55.8
Atru.chr6.1979 Acer truncatum HOM05D005564 ORTHO05D006872 5.0e-88 328.6 298 58.1
Atru.chr6.2007 Acer truncatum HOM05D005564 ORTHO05D006872 5.0e-88 328.6 298 58.1
AL8G25430 Arabidopsis lyrata HOM05D005564 ORTHO05D006872 5.0e-88 328.6 298 56.7
PGR042G2925 Punica granatum HOM05D005564 ORTHO05D006872 6.5e-88 328.2 292 58.2
CiPaw.07G183300 Carya illinoinensis HOM05D005564 ORTHO05D006872 8.5e-88 327.8 237 66.7
EL10Ac7g17720 Beta vulgaris HOM05D005564 ORTHO05D006872 1.1e-87 327.4 346 52.6
AT5G51170 Arabidopsis thaliana HOM05D005564 ORTHO05D006872 1.9e-87 326.6 291 57.7
Haze_22223 Corylus avellana HOM05D005564 ORTHO05D006872 2.5e-87 326.2 277 62.5
Lalb_Chr19g0127411 Lupinus albus HOM05D005564 ORTHO05D006872 4.2e-87 325.5 286 57.0
Prupe.2G270700 Prunus persica HOM05D005564 ORTHO05D006872 5.5e-87 325.1 287 59.2
VMungo1383G3643 Vigna mungo HOM05D005564 ORTHO05D006872 5.5e-87 325.1 287 57.1
Ah.08g213710 Amaranthus hybridus HOM05D005564 ORTHO05D006872 7.2e-87 324.7 293 58.0
CANSAT56G0249 Cannabis sativa HOM05D005564 ORTHO05D006872 9.4e-87 324.3 290 57.6
Carub.0008s1121 Capsella rubella HOM05D005564 ORTHO05D006872 1.2e-86 323.9 297 55.9
MD07G1241800 Malus domestica HOM05D005564 ORTHO05D006872 1.6e-86 323.6 291 58.8
Phvul.008G143300 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 2.1e-86 323.2 285 56.8
TPR.G39148 Trifolium pratense HOM05D005564 ORTHO05D006872 4.6e-86 322.0 305 53.8
Thhalv10014247m.g Eutrema salsugineum HOM05D005564 ORTHO05D006872 7.9e-86 321.2 298 55.4
Dinv34536 Davidia involucrata HOM05D005564 ORTHO05D006872 1.0e-85 320.9 273 60.8
Nn6g33765 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.0e-85 320.9 288 57.3
Sopen03g024760 Solanum pennellii HOM05D005564 ORTHO05D006872 1.0e-85 320.9 289 57.1
Cc00_g13030 Coffea canephora HOM05D005564 ORTHO05D006872 1.4e-85 320.5 294 56.1
BcaB08g35471 Brassica carinata HOM05D005564 ORTHO05D006872 1.8e-85 320.1 295 54.6
Solyc03g093880.3 Solanum lycopersicum HOM05D005564 ORTHO05D006872 3.9e-85 318.9 289 57.1
Glyma.01G079300 Glycine max HOM05D005564 ORTHO05D006872 6.7e-85 318.2 284 57.0
MD07G1243700 Malus domestica HOM05D005564 ORTHO05D006872 6.7e-85 318.2 293 58.0
QL09p027441 Quercus lobata HOM05D005564 ORTHO05D006872 6.7e-85 318.2 289 57.4
Aa31LG3G7670 Aethionema arabicum HOM05D005564 ORTHO05D006872 1.1e-84 317.4 297 54.2
FAN06G0976 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.1e-84 317.4 271 61.3
Peaxi162Scf00073g01727 Petunia axillaris HOM05D005564 ORTHO05D006872 1.1e-84 317.4 289 55.4
arahy.Tifrunner.gnm1.ann1.2T0BFY Arachis hypogaea HOM05D005564 ORTHO05D006872 2.5e-84 316.2 284 56.0
CDE02G1506 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 4.3e-84 315.5 284 56.0
COL.COLO4_37310 Corchorus olitorius HOM05D005564 ORTHO05D006872 4.3e-84 315.5 262 61.8
FAN03G1301 Fragaria x ananassa HOM05D005564 ORTHO05D006872 9.7e-84 314.3 271 60.9
CsaV3_5G005020 Cucumis sativus L. HOM05D005564 ORTHO05D006872 1.3e-83 313.9 293 56.7
CAN.G309.23 Capsicum annuum HOM05D005564 ORTHO05D006872 3.7e-83 312.4 290 55.9
Medtr0053s0020 Medicago truncatula HOM05D005564 ORTHO05D006872 3.7e-83 312.4 305 52.1
Hund18321 Selenicereus undatus HOM05D005564 ORTHO05D006872 3.7e-83 312.4 277 58.5
PGSC0003DMG400008328 Solanum tuberosum HOM05D005564 ORTHO05D006872 3.7e-83 312.4 289 56.4
MD01G1175500 Malus domestica HOM05D005564 ORTHO05D006872 4.8e-83 312.0 316 54.1
THA.LOC104825050 Tarenaya hassleriana HOM05D005564 ORTHO05D006872 6.3e-83 311.6 292 54.8
Eucgr.A02932 Eucalyptus grandis HOM05D005564 ORTHO05D006872 1.1e-82 310.8 290 56.9
Phvul.005G030000 Phaseolus vulgaris HOM05D005564 ORTHO05D006872 1.1e-82 310.8 287 54.7
CARHR256880 Cardamine hirsuta HOM05D005564 ORTHO05D006872 6.9e-82 308.1 298 54.7
TAR636G1392 Trochodendron aralioides HOM05D005564 ORTHO05D008130 2.0e-81 306.6 275 58.2
VMungo1080G0069 Vigna mungo HOM05D005564 ORTHO05D006872 5.9e-81 305.1 327 48.6
Ca_27086_v3 Cicer arietinum L. HOM05D005564 ORTHO05D006872 1.3e-80 303.9 276 56.9
PSO063G5398 Papaver somniferum HOM05D005564 ORTHO05D006872 3.2e-79 299.3 291 52.9
ClCG01G004820 Citrullus lanatus HOM05D005564 ORTHO05D006872 9.4e-79 297.7 297 53.9
Gorai.013G121700 Gossypium raimondii HOM05D005564 ORTHO05D006872 1.2e-78 297.4 260 59.2
DCAR_020165 Daucus carota HOM05D005564 ORTHO05D006872 4.7e-78 295.4 285 54.4
ECA233G5472 Erigeron canadensis HOM05D005564 ORTHO05D006872 4.7e-78 295.4 263 58.2
Gohir.A07G044400 Gossypium hirsutum HOM05D005564 ORTHO05D006872 2.3e-77 293.1 260 58.1
CSS0031726 Camellia sinensis var. sinensis HOM05D005564 ORTHO05D006872 5.1e-77 292.0 254 57.9
Sed0010204 Sechium edule HOM05D005564 ORTHO05D006872 1.4e-74 283.9 221 61.5
Zm00001eb249040 Zea mays HOM05D005564 ORTHO05D006872 4.1e-74 282.3 288 50.7
ClCG09G010750 Citrullus lanatus HOM05D005564 ORTHO05D006872 1.5e-73 280.4 284 53.5
unitig_21.g20780 Utricularia gibba HOM05D005564 ORTHO05D006872 1.5e-73 280.4 248 60.5
PSO017G2767 Papaver somniferum HOM05D005564 ORTHO05D006872 2.9e-72 276.2 273 52.0
PSO782G4004 Papaver somniferum HOM05D005564 ORTHO05D006872 6.5e-72 275.0 291 49.5
AUR62008825 Chenopodium quinoa HOM05D005564 ORTHO05D006872 1.9e-71 273.5 208 62.0
MD07G1244900 Malus domestica HOM05D005564 ORTHO05D006872 2.5e-71 273.1 207 63.8
RcHm_v2.0_Chr1g0373311 Rosa chinensis HOM05D005564 ORTHO05D006872 2.1e-70 270.0 225 64.0
ATR0188G007 Amborella trichopoda HOM05D005564 ORTHO05D006872 4.7e-70 268.9 288 50.3
FAN10G0633 Fragaria x ananassa HOM05D005564 ORTHO05D006872 1.4e-69 267.3 222 62.2
AUR62025416 Chenopodium quinoa HOM05D005564 ORTHO05D006872 3.9e-69 265.8 213 60.1
FAN01G2799 Fragaria x ananassa HOM05D005564 ORTHO05D006872 2.2e-67 260.0 295 49.8
SHI14145 Sapria himalayana HOM05D005564 ORTHO05D000001 8.2e-67 258.1 276 51.4
Rhsim03G0157100 Rhododendron simsii HOM05D005564 ORTHO05D006872 2.9e-64 249.6 238 57.6
MELO3C005454.2 Cucumis melo HOM05D005564 ORTHO05D006872 9.4e-63 244.6 226 58.0
SEGI_35477 Sequoiadendron giganteum HOM05D005564 ORTHO05D006872 2.2e-59 233.4 278 45.7
Os02g0651000 Oryza sativa ssp. japonica HOM05D005564 ORTHO05D006872 2.7e-57 226.5 186 58.1
CANSAT78G0945 Cannabis sativa HOM05D005564 ORTHO05D006872 6.1e-54 215.3 216 53.7
Nitab4.5_0000103g0380 Nicotiana tabacum HOM05D005564 ORTHO05D006872 2.6e-52 209.9 200 57.0
SMO145G0164 Selaginella moellendorffii HOM05D005564 ORTHO05D006872 6.3e-51 205.3 278 39.2
Gorai.006G046400 Gossypium raimondii HOM05D005564 ORTHO05D006872 8.3e-51 204.9 228 52.2
Sc19g0002740 Simmondsia chinensis HOM05D005564 ORTHO05D006872 1.1e-50 204.5 202 54.0
Hma1.2p1_1014F.1_g247920 Hydrangea macrophylla HOM05D005564 ORTHO05D006872 1.8e-50 203.8 181 55.8
Nn6g32633 Nelumbo nucifera HOM05D005564 ORTHO05D006872 1.6e-49 200.7 204 52.9
Medtr0092s0090 Medicago truncatula HOM05D005564 ORTHO05D006872 5.9e-49 198.7 216 49.5
MD07G1243300 Malus domestica HOM05D005564 ORTHO05D006872 2.1e-46 190.3 235 49.8
Aqoxy3G02663 Aquilegia oxysepala HOM05D005564 ORTHO05D006872 1.4e-45 187.6 130 64.6
Dinv34539 Davidia involucrata HOM05D005564 ORTHO05D006872 1.4e-45 187.6 265 44.9
AagrBONN_evm.TU.Sc2ySwM_228.2399 Anthoceros agrestis HOM05D005564 ORTHO05D006872 2.3e-45 186.8 244 41.0
MD07G1245400 Malus domestica HOM05D005564 ORTHO05D006872 4.4e-44 182.6 149 62.4
arahy.Tifrunner.gnm1.ann1.R6MN5Z Arachis hypogaea HOM05D005564 ORTHO05D006872 1.3e-43 181.0 295 38.3
Rhsim03G0158000 Rhododendron simsii HOM05D005564 ORTHO05D006872 8.3e-43 178.3 291 41.2
Pp3c13_1340 Physcomitrium patens HOM05D005564 ORTHO05D006872 1.2e-41 174.5 245 39.6
CAN.G1016.1 Capsicum annuum HOM05D005564 ORTHO05D006872 6.6e-40 168.7 122 61.5
CDE11G0070 Ceratophyllum demersum HOM05D005564 ORTHO05D006872 3.6e-38 162.9 202 48.0
Lsat_1_v5_gn_8_13861 Lactuca sativa HOM05D000071 ORTHO05D006872 9.8e-36 154.8 115 64.3
Gohir.D02G135666 Gossypium hirsutum HOM05D005564 ORTHO05D006872 1.3e-35 154.5 107 69.2
Prupe.4G133000 Prunus persica HOM05D005564 ORTHO05D006872 1.9e-34 150.6 170 50.0
CBR_g31024 Chara braunii HOM05D005564 ORTHO05D006872 1.8e-29 134.0 302 32.5
Psat3g166160 Pisum sativum HOM05D005564 ORTHO05D006872 1.3e-27 127.9 219 37.0
Nn6g32636 Nelumbo nucifera HOM05D005564 ORTHO05D006872 2.9e-27 126.7 86 66.3
Psat3g164240 Pisum sativum HOM05D005564 ORTHO05D006872 1.4e-26 124.4 200 39.5
Gohir.D02G130966 Gossypium hirsutum HOM05D005564 ORTHO05D006872 7.8e-25 118.6 138 47.1
Mapoly0036s0004 Marchantia polymorpha HOM05D005564 ORTHO05D006872 1.3e-19 101.3 176 35.2
MCO11G677 Micromonas commoda HOM05D005564 ORTHO05D006872 2.9e-19 100.1 241 29.5
Cre01.g041900 Chlamydomonas reinhardtii HOM05D005564 ORTHO05D006872 1.6e-14 84.3 225 27.1
Aqoxy3G02664 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 9.6e-07 58.5 84 44.0


User provided reference genes

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