Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23690 Avicennia marina HOM05D001054 ORTHO05D007110 0.0e+00 1090.9 528 100.0
Oeu013280.1 Olea europaea HOM05D001054 ORTHO05D007110 3.5e-289 997.7 528 90.5
SalBow6G1211 Salvia bowleyana HOM05D001054 ORTHO05D007110 1.9e-287 991.9 529 89.4
Migut.H00367 Erythranthe guttata HOM05D001054 ORTHO05D007110 6.8e-285 983.4 533 88.7
Lj7C88G8 Lonicera japonica HOM05D001054 ORTHO05D007110 7.0e-282 973.4 531 88.3
PGSC0003DMG400023692 Solanum tuberosum HOM05D001054 ORTHO05D007110 4.0e-277 957.6 528 87.3
Nn7g37208 Nelumbo nucifera HOM05D001054 ORTHO05D007110 8.9e-277 956.4 538 84.8
Hma1.2p1_0017F.1_g012090 Hydrangea macrophylla HOM05D001054 ORTHO05D007110 5.7e-276 953.7 532 86.5
Solyc10g080040.3 Solanum lycopersicum HOM05D001054 ORTHO05D007110 9.8e-276 953.0 528 86.9
Cc07_g06840 Coffea canephora HOM05D001054 ORTHO05D007110 1.7e-275 952.2 539 85.3
Manes.13G113500 Manihot esculenta HOM05D001054 ORTHO05D007110 6.4e-275 950.3 530 85.8
Sopen10g030650 Solanum pennellii HOM05D001054 ORTHO05D007110 8.3e-275 949.9 528 86.6
SGA_v2.0_scaffold72G24093 Striga asiatica HOM05D001054 ORTHO05D007110 2.4e-274 948.3 529 85.8
Nitab4.5_0006689g0010 Nicotiana tabacum HOM05D001054 ORTHO05D007110 1.1e-271 939.5 528 86.2
TAR625G0225 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.9e-271 938.7 538 84.0
Thecc.01G069100 Theobroma cacao HOM05D001054 ORTHO05D007110 8.0e-270 933.3 531 84.7
SGA_v2.0_scaffold15G07420 Striga asiatica HOM05D001054 ORTHO05D007110 1.4e-269 932.6 529 85.1
Peaxi162Scf00365g00936 Petunia axillaris HOM05D001054 ORTHO05D007110 1.8e-269 932.2 525 85.0
TWI09G0178 Tripterygium wilfordii HOM05D001054 ORTHO05D007110 1.8e-269 932.2 538 82.7
Nitab4.5_0002331g0050 Nicotiana tabacum HOM05D001054 ORTHO05D007110 3.1e-269 931.4 528 85.6
Cpa.g.sc6.46 Carica papaya HOM05D001054 ORTHO05D007110 2.0e-268 928.7 539 82.7
Rhsim10G0102900 Rhododendron simsii HOM05D001054 ORTHO05D007110 3.4e-268 927.9 589 78.4
Gorai.008G080600 Gossypium raimondii HOM05D001054 ORTHO05D007110 9.8e-268 926.4 531 84.4
PGR004G0129 Punica granatum HOM05D001054 ORTHO05D007110 9.8e-268 926.4 536 84.7
TAR628G0943 Trochodendron aralioides HOM05D001054 ORTHO05D007110 1.7e-267 925.6 538 82.2
MBI19_g10811_MAGBIO Magnolia biondii HOM05D001054 ORTHO05D007110 3.7e-267 924.5 532 83.6
HanXRQChr14g0441861 Helianthus annuus HOM05D001054 ORTHO05D007110 1.9e-266 922.2 529 83.4
FvH4_1g17270 Fragaria vesca HOM05D001054 ORTHO05D007110 3.2e-266 921.4 534 82.0
Gohir.D12G073300 Gossypium hirsutum HOM05D001054 ORTHO05D007110 3.2e-266 921.4 531 83.8
DCAR_010834 Daucus carota HOM05D001054 ORTHO05D007110 2.7e-265 918.3 547 81.7
Sed0014779 Sechium edule HOM05D001054 ORTHO05D007110 6.0e-265 917.1 535 81.7
CsaV3_6G043910 Cucumis sativus L. HOM05D001054 ORTHO05D007110 7.8e-265 916.8 534 81.6
CANSAT01G2549 Cannabis sativa HOM05D001054 ORTHO05D007110 2.3e-264 915.2 540 82.6
Eucgr.C03692 Eucalyptus grandis HOM05D001054 ORTHO05D007110 2.3e-264 915.2 541 81.7
Aqoxy2G00045 Aquilegia oxysepala HOM05D001054 ORTHO05D007110 1.9e-263 912.1 546 81.9
FAN19G1445 Fragaria x ananassa HOM05D001054 ORTHO05D007110 1.9e-263 912.1 543 80.5
Duzib264G0621 Durio zibethinus HOM05D001054 ORTHO05D007110 2.5e-263 911.8 543 81.4
Prupe.6G223800 Prunus persica HOM05D001054 ORTHO05D007110 2.5e-263 911.8 536 81.7
Sed0024674 Sechium edule HOM05D001054 ORTHO05D007110 9.5e-263 909.8 537 81.4
ClCG01G017380 Citrullus lanatus HOM05D001054 ORTHO05D007110 2.1e-262 908.7 535 81.5
PSO541G5579 Papaver somniferum HOM05D001054 ORTHO05D007110 4.7e-262 907.5 516 83.5
Ciclev10025341m.g Citrus clementina HOM05D001054 ORTHO05D007110 8.1e-262 906.7 533 81.8
Atru.chr3.194 Acer truncatum HOM05D001054 ORTHO05D007110 1.4e-261 906.0 538 81.6
Cfa004102 Carpinus fangiana HOM05D001054 ORTHO05D007110 1.8e-261 905.6 535 82.6
MELO3C007616.2 Cucumis melo HOM05D001054 ORTHO05D007110 1.8e-261 905.6 561 78.4
PSO675G2247 Papaver somniferum HOM05D001054 ORTHO05D007110 1.8e-261 905.6 516 83.3
AL7G13250 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 6.8e-261 903.7 523 82.6
FAN26G1436 Fragaria x ananassa HOM05D001054 ORTHO05D007110 6.8e-261 903.7 569 77.0
RcHm_v2.0_Chr2g0107461 Rosa chinensis HOM05D001054 ORTHO05D007110 1.5e-260 902.5 590 75.8
Sc16g0004970 Simmondsia chinensis HOM05D001054 ORTHO05D007110 2.0e-260 902.1 536 81.5
AT4G37510 Arabidopsis thaliana HOM05D001054 ORTHO05D007110 2.6e-260 901.7 522 82.6
Carub.0007s0278 Capsella rubella HOM05D001054 ORTHO05D007110 3.4e-260 901.4 525 81.7
CiPaw.01G007000 Carya illinoinensis HOM05D001054 ORTHO05D007110 3.4e-260 901.4 532 83.1
Aa31LG6G14390 Aethionema arabicum HOM05D001054 ORTHO05D007110 5.8e-260 900.6 525 82.1
Atru.chr3.165 Acer truncatum HOM05D001054 ORTHO05D007110 9.9e-260 899.8 541 81.1
FAN23G1327 Fragaria x ananassa HOM05D001054 ORTHO05D007110 9.9e-260 899.8 556 78.8
Lsat_1_v5_gn_2_83701 Lactuca sativa HOM05D001054 ORTHO05D007110 9.9e-260 899.8 526 82.9
Eucgr.C03920 Eucalyptus grandis HOM05D001054 ORTHO05D007110 1.3e-259 899.4 541 80.4
COL.COLO4_11542 Corchorus olitorius HOM05D001054 ORTHO05D007110 3.7e-259 897.9 531 81.4
THA.LOC104807624 Tarenaya hassleriana HOM05D001054 ORTHO05D007110 4.1e-258 894.4 525 81.5
CDE04G1953 Ceratophyllum demersum HOM05D001054 ORTHO05D007110 5.4e-258 894.0 519 83.2
AUR62003982 Chenopodium quinoa HOM05D001054 ORTHO05D007110 7.1e-258 893.6 522 82.6
AUR62040267 Chenopodium quinoa HOM05D001054 ORTHO05D007110 7.1e-258 893.6 520 82.7
DCAR_021470 Daucus carota HOM05D001054 ORTHO05D007110 9.2e-258 893.3 522 83.0
Potri.007G053000 Populus trichocarpa HOM05D001054 ORTHO05D007110 9.2e-258 893.3 531 79.8
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 9.2e-258 893.3 469 90.6
Thhalv10024858m.g Eutrema salsugineum HOM05D001054 ORTHO05D007110 1.2e-257 892.9 525 81.3
Sp7g35190 Schrenkiella parvula HOM05D001054 ORTHO05D007110 4.6e-257 891.0 525 80.8
CARHR245910 Cardamine hirsuta HOM05D001054 ORTHO05D007110 1.3e-256 889.4 528 81.4
EL10Ac6g15648 Beta vulgaris HOM05D001054 ORTHO05D007110 3.9e-256 887.9 520 81.5
Sabra07G0046600 Salix brachista HOM05D001054 ORTHO05D007110 9.5e-255 883.2 531 79.3
ATR1096G061 Amborella trichopoda HOM05D001054 ORTHO05D007110 1.2e-254 882.9 528 79.9
Lj2g0007837 Lotus japonicus HOM05D001054 ORTHO05D007110 6.2e-254 880.6 535 81.1
Haze_15309 Corylus avellana HOM05D001054 ORTHO05D007110 8.9e-253 876.7 555 78.6
CSS0030463 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 2.6e-252 875.2 522 82.2
Medtr5g016070 Medicago truncatula HOM05D001054 ORTHO05D007110 3.4e-252 874.8 533 80.5
Glyma.11G049900 Glycine max HOM05D001054 ORTHO05D007110 1.1e-250 869.8 542 79.7
Psat2g170280 Pisum sativum HOM05D001054 ORTHO05D007110 1.9e-250 869.0 539 78.5
TPR.G20955 Trifolium pratense HOM05D001054 ORTHO05D007110 1.9e-250 869.0 542 78.6
Hund13932 Selenicereus undatus HOM05D001054 ORTHO05D007110 2.4e-250 868.6 534 78.7
A01p01450 Brassica napus HOM05D001054 ORTHO05D007110 1.7e-248 862.4 535 79.3
BraA01t00139Z Brassica rapa HOM05D001054 ORTHO05D007110 2.3e-248 862.1 535 79.1
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.3e-248 862.1 492 83.1
Glyma.01G192200 Glycine max HOM05D001054 ORTHO05D007110 1.1e-247 859.8 495 82.4
BcaNung03665 Brassica carinata HOM05D001054 ORTHO05D007110 1.9e-247 859.0 519 79.2
C01p01620 Brassica napus HOM05D001054 ORTHO05D007110 1.9e-247 859.0 519 79.2
BolC1t00157H Brassica oleracea HOM05D001054 ORTHO05D007110 9.6e-247 856.7 517 79.5
Phvul.002G012600 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.8e-246 855.1 530 78.9
VMungo1215G2035 Vigna mungo HOM05D001054 ORTHO05D007110 2.8e-246 855.1 530 78.9
BcaNung05084 Brassica carinata HOM05D001054 ORTHO05D007110 2.4e-245 852.0 527 78.4
Lalb_Chr05g0213551 Lupinus albus HOM05D001054 ORTHO05D007110 7.6e-244 847.0 535 77.0
arahy.Tifrunner.gnm1.ann1.5YK3TE Arachis hypogaea HOM05D001054 ORTHO05D007110 3.8e-243 844.7 515 77.9
Os01g0810100 Oryza sativa ssp. japonica HOM05D001054 ORTHO05D007110 3.5e-241 838.2 483 82.0
Lalb_Chr09g0323511 Lupinus albus HOM05D001054 ORTHO05D007110 6.6e-240 833.9 546 75.1
HPP92_018502 Vanilla planifolia HOM05D001054 ORTHO05D007110 3.6e-238 828.2 530 75.7
arahy.Tifrunner.gnm1.ann1.S94KHE Arachis hypogaea HOM05D001054 ORTHO05D007110 1.1e-237 826.6 560 73.8
arahy.Tifrunner.gnm1.ann1.AR4BCX Arachis hypogaea HOM05D001054 ORTHO05D007110 3.1e-237 825.1 545 75.0
arahy.Tifrunner.gnm1.ann1.V4EKGG Arachis hypogaea HOM05D001054 ORTHO05D007110 1.2e-236 823.2 560 73.6
arahy.Tifrunner.gnm1.ann1.UKA06W Arachis hypogaea HOM05D001054 ORTHO05D007110 1.5e-236 822.8 545 75.0
arahy.Tifrunner.gnm1.ann1.SB8Z2H Arachis hypogaea HOM05D001054 ORTHO05D007110 9.9e-236 820.1 537 73.9
Lj4g0019986 Lotus japonicus HOM05D001054 ORTHO05D007110 7.6e-228 793.9 532 73.7
VMungo0251G1033 Vigna mungo HOM05D001054 ORTHO05D007110 2.9e-227 792.0 535 72.1
Phvul.003G236900 Phaseolus vulgaris HOM05D001054 ORTHO05D007110 2.7e-225 785.4 534 72.1
HPP92_017544 Vanilla planifolia HOM05D001054 ORTHO05D007110 1.4e-221 773.1 477 76.9
ECA238G1085 Erigeron canadensis HOM05D001054 ORTHO05D007110 1.6e-214 749.6 398 85.9
TPR.G23864 Trifolium pratense HOM05D001054 ORTHO05D007110 3.7e-214 748.4 539 68.8
Ah.02g125600 Amaranthus hybridus HOM05D001054 ORTHO05D007110 6.9e-213 744.2 426 81.0
Medtr4g095410 Medicago truncatula HOM05D001054 ORTHO05D007110 1.2e-212 743.4 516 70.7
Zm00001eb150280 Zea mays HOM05D001054 ORTHO05D007110 1.7e-211 739.6 469 75.5
Gohir.A12G075200 Gossypium hirsutum HOM05D001054 ORTHO05D007110 2.2e-203 712.6 427 81.0
Dinv26904 Davidia involucrata HOM05D001054 ORTHO05D007110 2.7e-201 705.7 398 85.4
Actinidia36442 Actinidia chinensis HOM05D001054 ORTHO05D007110 7.4e-199 697.6 510 69.6
Psat4g083600 Pisum sativum HOM05D001054 ORTHO05D007110 1.3e-187 660.2 401 76.6
CSS0024742 Camellia sinensis var. sinensis HOM05D001054 ORTHO05D007110 5.5e-186 654.8 332 91.3
AL5G41245 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 3.2e-157 559.3 407 70.5
HPP92_017568 Vanilla planifolia HOM05D001054 ORTHO05D007110 5.6e-154 548.5 395 70.4
Mapoly0005s0153 Marchantia polymorpha HOM05D001054 ORTHO05D007110 1.2e-153 547.4 509 55.2
GSVIVG01000148001 Vitis vinifera HOM05D001054 ORTHO05D007110 1.6e-153 547.0 283 88.0
Pp3c5_10700 Physcomitrium patens HOM05D001054 ORTHO05D007110 1.8e-152 543.5 473 56.9
vmacro05387 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 8.6e-139 498.0 346 70.2
SEGI_29234 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 7.1e-133 478.4 391 61.9
AagrBONN_evm.TU.Sc2ySwM_368.879 Anthoceros agrestis HOM05D001054 ORTHO05D007110 2.5e-130 469.9 451 53.9
SMO119G0428 Selaginella moellendorffii HOM05D001054 ORTHO05D007110 2.6e-127 459.9 451 51.0
Glyma.05G104100 Glycine max HOM05D001054 ORTHO05D007110 6.2e-121 438.7 324 67.9
vmacro05388 Vaccinium macrocarpon HOM05D001054 ORTHO05D007110 3.0e-115 419.9 269 78.1
FAN28G0670 Fragaria x ananassa HOM05D001054 ORTHO05D007110 8.5e-94 348.6 229 77.3
MD15G1293700 Malus domestica HOM05D001054 ORTHO05D007110 8.8e-91 338.6 181 86.2
Duzib147G0207 Durio zibethinus HOM05D001054 ORTHO05D007110 6.9e-88 328.9 182 85.2
AL7G13080 Arabidopsis lyrata HOM05D001054 ORTHO05D007110 4.5e-79 299.7 232 64.2
SEGI_10508 Sequoiadendron giganteum HOM05D001054 ORTHO05D007110 6.8e-59 232.6 135 77.8
Actinidia11996 Actinidia chinensis HOM05D001054 ORTHO05D007110 1.5e-45 188.3 115 79.1
Eucgr.C03694 Eucalyptus grandis HOM05D001054 ORTHO05D026867 4.0e-43 180.3 102 79.4
Actinidia11995 Actinidia chinensis HOM05D001054 ORTHO05D038022 6.2e-36 156.4 81 90.1
Oeu038701.1 Olea europaea HOM05D001054 ORTHO05D038022 3.6e-28 130.6 68 86.8
AT2G48121 Arabidopsis thaliana HOM05D001054 ORTHO05D026867 7.3e-21 106.3 58 86.2
C07p62420 Brassica napus HOM05D001054 ORTHO05D007110 1.2e-20 105.5 53 90.6
A03p65210 Brassica napus HOM05D001054 ORTHO05D026867 2.1e-20 104.8 60 81.7
BraA03t15579Z Brassica rapa HOM05D001054 ORTHO05D026867 2.1e-20 104.8 60 81.7
BcaNung02059 Brassica carinata HOM05D001054 ORTHO05D007110 1.5e-18 98.6 50 86.0
Sed0007349 Sechium edule HOM05D001054 ORTHO05D007110 3.6e-12 77.4 78 51.3
CBR_g21303 Chara braunii HOM05D001677 ORTHO05D000002 8.7e-06 56.2 183 27.9


User provided reference genes

Program Settings