Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21138 Avicennia marina HOM05D006124 ORTHO05D007854 3.5e-244 847.8 419 100.0
Migut.D02195 Erythranthe guttata HOM05D006124 ORTHO05D007854 1.6e-212 742.7 423 84.9
SGA_v2.0_scaffold61G21160 Striga asiatica HOM05D006124 ORTHO05D007854 1.4e-208 729.6 436 82.6
Cc01_g01430 Coffea canephora HOM05D006124 ORTHO05D007854 1.0e-206 723.4 391 86.7
Nitab4.5_0000214g0090 Nicotiana tabacum HOM05D006124 ORTHO05D007854 3.6e-204 714.9 410 83.7
Peaxi162Scf00876g00022 Petunia axillaris HOM05D006124 ORTHO05D007854 4.7e-204 714.5 412 85.4
Solyc04g054700.3 Solanum lycopersicum HOM05D006124 ORTHO05D007854 1.8e-203 712.6 410 83.4
CAN.G219.5 Capsicum annuum HOM05D006124 ORTHO05D007854 6.7e-203 710.7 410 85.1
Hma1.2p1_0002F.1_g001970 Hydrangea macrophylla HOM05D006124 ORTHO05D007854 1.3e-201 706.4 421 82.7
Peaxi162Scf00272g00827 Petunia axillaris HOM05D006124 ORTHO05D007854 2.8e-201 705.3 410 84.1
Dinv30520 Davidia involucrata HOM05D006124 ORTHO05D007854 1.0e-198 696.8 393 84.5
Nitab4.5_0004386g0010 Nicotiana tabacum HOM05D006124 ORTHO05D007854 2.9e-198 695.3 410 82.4
CSS0017090 Camellia sinensis var. sinensis HOM05D006124 ORTHO05D007854 8.5e-198 693.7 427 80.3
Rhsim08G0043400 Rhododendron simsii HOM05D006124 ORTHO05D007854 1.9e-197 692.6 398 83.4
HanXRQChr02g0055911 Helianthus annuus HOM05D006124 ORTHO05D007854 2.5e-197 692.2 393 83.5
vmacro03179 Vaccinium macrocarpon HOM05D006124 ORTHO05D007854 4.7e-196 688.0 398 82.7
QL01p023235 Quercus lobata HOM05D006124 ORTHO05D007854 6.1e-196 687.6 394 81.7
Actinidia07118 Actinidia chinensis HOM05D006124 ORTHO05D007854 2.3e-195 685.6 400 81.0
GSVIVG01025154001 Vitis vinifera HOM05D006124 ORTHO05D007854 8.8e-195 683.7 394 81.7
Lsat_1_v5_gn_6_46340 Lactuca sativa HOM05D006124 ORTHO05D007854 4.4e-194 681.4 393 81.7
Cfa012640 Carpinus fangiana HOM05D006124 ORTHO05D007854 9.7e-194 680.2 415 78.6
Haze_08019 Corylus avellana HOM05D006124 ORTHO05D007854 1.3e-193 679.9 423 77.3
CANSAT54G1697 Cannabis sativa HOM05D006124 ORTHO05D007854 2.2e-193 679.1 414 79.0
Duzib150G0641 Durio zibethinus HOM05D006124 ORTHO05D007854 6.3e-193 677.6 395 81.3
unitig_21.g20322 Utricularia gibba HOM05D006124 ORTHO05D007854 8.2e-193 677.2 431 75.9
Thecc.09G259100 Theobroma cacao HOM05D006124 ORTHO05D007854 1.4e-192 676.4 393 81.2
Prupe.6G097100 Prunus persica HOM05D006124 ORTHO05D007854 4.5e-191 671.4 412 79.6
MELO3C005421.2 Cucumis melo HOM05D006124 ORTHO05D007854 7.7e-191 670.6 416 77.6
ECA233G1948 Erigeron canadensis HOM05D006124 ORTHO05D007854 5.0e-190 667.9 386 80.8
Ciclev10005033m.g Citrus clementina HOM05D006124 ORTHO05D007854 6.5e-190 667.5 395 80.0
Ciclev10011800m.g Citrus clementina HOM05D006124 ORTHO05D007854 8.5e-190 667.2 395 79.7
CsaV3_5G005370 Cucumis sativus L. HOM05D006124 ORTHO05D007854 3.2e-189 665.2 416 76.9
Cpa.g.sc139.77 Carica papaya HOM05D006124 ORTHO05D007854 4.2e-189 664.8 397 80.4
Atru.chr3.3681 Acer truncatum HOM05D006124 ORTHO05D007854 5.5e-189 664.5 394 80.2
MD03G1112800 Malus domestica HOM05D006124 ORTHO05D007854 5.5e-189 664.5 412 78.9
COL.COLO4_05187 Corchorus olitorius HOM05D006124 ORTHO05D007854 1.2e-188 663.3 393 79.9
Gohir.A09G106200 Gossypium hirsutum HOM05D006124 ORTHO05D007854 1.2e-188 663.3 412 77.9
Gorai.006G120700 Gossypium raimondii HOM05D006124 ORTHO05D007854 1.2e-188 663.3 412 77.9
THA.LOC104801004 Tarenaya hassleriana HOM05D006124 ORTHO05D007854 2.1e-188 662.5 396 78.8
MBI18_g17017_MAGBIO Magnolia biondii HOM05D006124 ORTHO05D007854 3.6e-188 661.8 395 78.5
Gohir.D09G102900 Gossypium hirsutum HOM05D006124 ORTHO05D007854 4.7e-188 661.4 412 76.5
Manes.04G024500 Manihot esculenta HOM05D006124 ORTHO05D007854 1.0e-187 660.2 410 76.8
SalBow3G1513 Salvia bowleyana HOM05D006124 ORTHO05D007854 1.0e-187 660.2 374 85.8
RcHm_v2.0_Chr5g0060301 Rosa chinensis HOM05D006124 ORTHO05D007854 1.4e-187 659.8 411 77.1
ClCG01G004970 Citrullus lanatus HOM05D006124 ORTHO05D007854 1.8e-187 659.4 417 76.7
TWI39G0794 Tripterygium wilfordii HOM05D006124 ORTHO05D007854 1.8e-187 659.4 390 80.0
Glyma.11G073900 Glycine max HOM05D006124 ORTHO05D007854 6.8e-187 657.5 396 76.0
Glyma.19G129000 Glycine max HOM05D006124 ORTHO05D007854 6.8e-187 657.5 397 76.6
FAN25G1144 Fragaria x ananassa HOM05D006124 ORTHO05D007854 1.2e-186 656.8 411 76.2
Lj1g0025688 Lotus japonicus HOM05D006124 ORTHO05D007854 2.6e-186 655.6 397 76.3
EL10Ac5g12347 Beta vulgaris HOM05D006124 ORTHO05D007854 4.4e-186 654.8 396 77.5
Eucgr.J00945 Eucalyptus grandis HOM05D006124 ORTHO05D007854 7.5e-186 654.1 397 78.8
Aqoxy5G00340 Aquilegia oxysepala HOM05D006124 ORTHO05D007854 1.3e-185 653.3 394 79.2
Lalb_Chr22g0357551 Lupinus albus HOM05D006124 ORTHO05D007854 1.3e-185 653.3 394 76.9
TPR.G16093 Trifolium pratense HOM05D006124 ORTHO05D007854 1.7e-185 652.9 394 77.2
FAN21G3497 Fragaria x ananassa HOM05D006124 ORTHO05D007854 2.2e-185 652.5 411 75.7
Ca_08379_v3 Cicer arietinum L. HOM05D006124 ORTHO05D007854 2.8e-185 652.1 397 77.1
FvH4_3g32970 Fragaria vesca HOM05D006124 ORTHO05D007854 2.8e-185 652.1 411 75.4
Nn7g36111 Nelumbo nucifera HOM05D006124 ORTHO05D007854 2.8e-185 652.1 389 80.2
FAN11G0357 Fragaria x ananassa HOM05D006124 ORTHO05D007854 6.3e-185 651.0 411 75.2
Oeu035057.1 Olea europaea HOM05D006124 ORTHO05D007854 1.8e-184 649.4 373 86.9
Sabra04G0071700 Salix brachista HOM05D006124 ORTHO05D007854 1.8e-184 649.4 393 78.9
Potri.004G113700 Populus trichocarpa HOM05D006124 ORTHO05D007854 4.1e-184 648.3 393 78.6
arahy.Tifrunner.gnm1.ann1.63AZS3 Arachis hypogaea HOM05D006124 ORTHO05D007854 5.9e-183 644.4 397 76.3
Sp1g03920 Schrenkiella parvula HOM05D006124 ORTHO05D007854 5.9e-183 644.4 400 76.8
VMungo1383G3228 Vigna mungo HOM05D006124 ORTHO05D007854 5.9e-183 644.4 396 75.0
arahy.Tifrunner.gnm1.ann1.M1WJK6 Arachis hypogaea HOM05D006124 ORTHO05D007854 1.7e-182 642.9 397 76.3
Sed0018571 Sechium edule HOM05D006124 ORTHO05D007854 2.9e-182 642.1 395 77.0
Medtr7g089440 Medicago truncatula HOM05D006124 ORTHO05D007854 3.8e-182 641.7 398 75.4
AL1G14800 Arabidopsis lyrata HOM05D006124 ORTHO05D007854 1.5e-181 639.8 398 75.4
AT1G05055 Arabidopsis thaliana HOM05D006124 ORTHO05D007854 1.5e-181 639.8 398 75.4
A08p36590 Brassica napus HOM05D006124 ORTHO05D007854 1.5e-181 639.8 416 73.3
BraA08t35561Z Brassica rapa HOM05D006124 ORTHO05D007854 1.5e-181 639.8 416 73.3
Aa31LG1G19730 Aethionema arabicum HOM05D006124 ORTHO05D007854 1.9e-181 639.4 393 76.8
BcaB03g13459 Brassica carinata HOM05D006124 ORTHO05D007854 2.5e-181 639.0 398 75.9
PSO339G3674 Papaver somniferum HOM05D006124 ORTHO05D007854 2.5e-181 639.0 393 76.3
PSO384G4530 Papaver somniferum HOM05D006124 ORTHO05D007854 5.5e-181 637.9 393 76.3
PSO541G0641 Papaver somniferum HOM05D006124 ORTHO05D007854 5.5e-181 637.9 393 76.3
C08p01730 Brassica napus HOM05D006124 ORTHO05D007854 7.2e-181 637.5 416 73.1
BolC8t46973H Brassica oleracea HOM05D006124 ORTHO05D007854 7.2e-181 637.5 416 73.1
CiPaw.05G171100 Carya illinoinensis HOM05D006124 ORTHO05D007854 7.2e-181 637.5 394 77.2
Thhalv10007730m.g Eutrema salsugineum HOM05D006124 ORTHO05D007854 7.2e-181 637.5 398 75.4
CARHR004500 Cardamine hirsuta HOM05D006124 ORTHO05D007854 1.6e-180 636.3 416 72.4
Lalb_Chr14g0365721 Lupinus albus HOM05D006124 ORTHO05D007854 1.8e-179 632.9 393 74.8
Carub.0001s0430 Capsella rubella HOM05D006124 ORTHO05D007854 1.1e-176 623.6 398 74.1
DCAR_015555 Daucus carota HOM05D006124 ORTHO05D007854 6.1e-172 607.8 366 79.5
Os04g0508900 Oryza sativa ssp. japonica HOM05D006124 ORTHO05D007854 5.7e-170 601.3 397 72.3
Zm00001eb077790 Zea mays HOM05D006124 ORTHO05D007854 1.3e-169 600.1 392 73.5
CiPaw.13G108300 Carya illinoinensis HOM05D006124 ORTHO05D007854 1.8e-168 596.3 351 80.3
Sopen04g024450 Solanum pennellii HOM05D006124 ORTHO05D007854 3.3e-165 585.5 318 86.5
SEGI_32950 Sequoiadendron giganteum HOM05D006124 ORTHO05D007854 2.1e-164 582.8 387 69.8
PGR119G0371 Punica granatum HOM05D006124 ORTHO05D007854 8.0e-164 580.9 351 80.1
AUR62021039 Chenopodium quinoa HOM05D006124 ORTHO05D007854 1.7e-161 573.2 350 77.7
AUR62018404 Chenopodium quinoa HOM05D006124 ORTHO05D007854 2.9e-161 572.4 359 76.6
Peaxi162Scf00106g02220 Petunia axillaris HOM05D006124 ORTHO05D007854 8.6e-158 560.8 404 73.3
CDE04G2680 Ceratophyllum demersum HOM05D006124 ORTHO05D007854 4.0e-155 552.0 331 78.5
Ah.13g077240 Amaranthus hybridus HOM05D006124 ORTHO05D007854 2.2e-153 546.2 319 79.3
TAR369G0666 Trochodendron aralioides HOM05D006124 ORTHO05D007854 6.0e-151 538.1 329 77.2
Sc06g0010480 Simmondsia chinensis HOM05D006124 ORTHO05D007854 1.3e-150 537.0 319 77.1
Mapoly0005s0033 Marchantia polymorpha HOM05D006124 ORTHO05D007854 1.6e-148 530.0 388 62.4
Pp3c24_6530 Physcomitrium patens HOM05D006124 ORTHO05D007854 8.9e-147 524.2 381 62.5
Phvul.001G121400 Phaseolus vulgaris HOM05D006124 ORTHO05D007854 3.8e-145 518.8 312 76.0
MD11G1132000 Malus domestica HOM05D006124 ORTHO05D007854 1.4e-144 516.9 350 70.9
ATR0580G285 Amborella trichopoda HOM05D006124 ORTHO05D007854 7.3e-141 504.6 317 73.5
Lj1C682G4 Lonicera japonica HOM05D006124 ORTHO05D007854 2.1e-140 503.1 276 87.0
SMO141G0040 Selaginella moellendorffii HOM05D006124 ORTHO05D007854 4.0e-139 498.8 385 58.2
Peaxi162Scf00876g00023 Petunia axillaris HOM05D006124 ORTHO05D007854 6.9e-139 498.0 293 82.9
CBR_g21234 Chara braunii HOM05D006124 ORTHO05D007854 5.4e-136 488.4 390 57.9
Psat3g079640 Pisum sativum HOM05D006124 ORTHO05D007854 5.8e-122 441.8 267 77.2
CAN.G1136.1 Capsicum annuum HOM05D006124 ORTHO05D007854 3.3e-109 399.4 246 77.6
PGSC0003DMG401027913 Solanum tuberosum HOM05D006124 ORTHO05D007854 4.5e-106 389.0 242 81.8
Cre03.g179550 Chlamydomonas reinhardtii HOM05D006124 ORTHO05D007854 2.1e-103 380.2 401 45.9
AagrBONN_evm.TU.Sc2ySwM_344.4431 Anthoceros agrestis HOM05D006124 ORTHO05D007854 3.3e-101 372.9 274 61.7
BolC5t29103H Brassica oleracea HOM05D006124 ORTHO05D007854 2.0e-93 347.1 277 63.9
MCO11G183 Micromonas commoda HOM05D006124 ORTHO05D007854 4.4e-93 345.9 399 44.9
Solyc08g028693.1 Solanum lycopersicum HOM05D006124 ORTHO05D007854 6.9e-91 338.6 182 90.1
Haze_26481 Corylus avellana HOM05D006124 ORTHO05D007854 1.3e-81 307.8 389 41.9
PRCOL_00001395 Prasinoderma coloniale HOM05D006124 ORTHO05D007854 1.4e-67 261.2 358 40.2
Cfa026643 Carpinus fangiana HOM05D006124 ORTHO05D007854 3.5e-66 256.5 433 33.9
Lj1A187G25 Lonicera japonica HOM05D006124 ORTHO05D007854 1.6e-58 231.1 318 42.1
HPP92_015146 Vanilla planifolia HOM05D006124 ORTHO05D007854 9.5e-32 142.1 90 71.1
Peaxi162Scf00876g00016 Petunia axillaris HOM05D006124 ORTHO05D007854 4.9e-28 129.8 94 78.7
Psat6g235520 Pisum sativum HOM05D006124 ORTHO05D001516 1.2e-21 108.6 74 66.2
BcaC09g51580 Brassica carinata HOM05D006124 ORTHO05D007854 5.8e-21 106.3 74 70.3
Lj1A682T15 Lonicera japonica HOM05D006124 ORTHO05D007854 5.6e-16 89.7 48 72.9
ClCG03G002310 Citrullus lanatus HOM05D006124 ORTHO05D150439 1.1e-14 85.5 134 38.1
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 4.5e-13 80.1 89 52.8
HPP92_015147 Vanilla planifolia HOM05D006124 ORTHO05D007854 1.1e-11 75.5 59 66.1
RcHm_v2.0_Chr5g0060231 Rosa chinensis HOM05D006124 ORTHO05D007854 2.3e-09 67.8 42 73.8
ECA233G1860 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.8e-07 60.1 89 44.9


User provided reference genes

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