Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21004 Avicennia marina HOM05D004977 ORTHO05D006454 1.5e-98 362.8 186 100.0
MSTRG.21003 Avicennia marina HOM05D004977 ORTHO05D006454 1.3e-94 349.7 179 100.0
MSTRG.21010 Avicennia marina HOM05D004977 ORTHO05D006454 9.0e-91 337.0 179 95.0
Migut.D02372 Erythranthe guttata HOM05D004977 ORTHO05D006454 2.7e-87 325.5 179 91.6
Migut.D02375 Erythranthe guttata HOM05D004977 ORTHO05D006454 6.0e-87 324.3 179 91.1
Actinidia37640 Actinidia chinensis HOM05D004977 ORTHO05D006454 1.3e-86 323.2 179 89.9
Oeu058189.1 Olea europaea HOM05D004977 ORTHO05D006454 6.7e-86 320.9 185 89.2
Potri.001G213900 Populus trichocarpa HOM05D004977 ORTHO05D006454 8.7e-86 320.5 179 88.8
TAR633G0771 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.1e-85 320.1 179 88.8
GSVIVG01037357001 Vitis vinifera HOM05D004977 ORTHO05D006454 1.5e-85 319.7 179 89.4
Haze_23597 Corylus avellana HOM05D004977 ORTHO05D006454 3.3e-85 318.5 179 88.8
SGA_v2.0_scaffold7G04011 Striga asiatica HOM05D004977 ORTHO05D006454 4.3e-85 318.2 179 88.8
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 4.3e-85 318.2 179 88.8
Duzib114G0826 Durio zibethinus HOM05D004977 ORTHO05D006454 1.6e-84 316.2 179 88.3
Actinidia04910 Actinidia chinensis HOM05D004977 ORTHO05D006454 2.1e-84 315.8 179 88.8
Gohir.A05G395800 Gossypium hirsutum HOM05D004977 ORTHO05D006454 3.7e-84 315.1 179 88.3
Manes.04G055000 Manihot esculenta HOM05D004977 ORTHO05D006454 6.2e-84 314.3 178 87.1
Thecc.10G121800 Theobroma cacao HOM05D004977 ORTHO05D006454 6.2e-84 314.3 179 87.7
Cc01_g07900 Coffea canephora HOM05D004977 ORTHO05D006454 8.1e-84 313.9 179 87.7
Gohir.D04G019200 Gossypium hirsutum HOM05D004977 ORTHO05D006454 1.1e-83 313.5 179 87.2
Gorai.012G023000 Gossypium raimondii HOM05D004977 ORTHO05D006454 1.1e-83 313.5 179 87.2
CiPaw.13G126500 Carya illinoinensis HOM05D004977 ORTHO05D006454 2.4e-83 312.4 178 88.2
TWI31G0709 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 5.3e-83 311.2 179 86.0
CSS0048805 Camellia sinensis var. sinensis HOM05D004977 ORTHO05D006454 6.9e-83 310.8 189 84.1
Sc11g0002670 Simmondsia chinensis HOM05D004977 ORTHO05D006454 9.0e-83 310.5 178 87.1
SalBow6G4955 Salvia bowleyana HOM05D004977 ORTHO05D006454 1.2e-82 310.1 179 86.0
Nn6g34596 Nelumbo nucifera HOM05D004977 ORTHO05D006454 2.6e-82 308.9 179 87.2
QL01p019084 Quercus lobata HOM05D004977 ORTHO05D006454 5.8e-82 307.8 179 86.0
Atru.chr7.2568 Acer truncatum HOM05D004977 ORTHO05D006454 1.3e-81 306.6 179 86.6
MELO3C014528.2 Cucumis melo HOM05D004977 ORTHO05D006454 4.9e-81 304.7 179 86.0
THA.LOC104810945 Tarenaya hassleriana HOM05D004977 ORTHO05D006454 6.4e-81 304.3 179 86.0
TWI79G0798 Tripterygium wilfordii HOM05D004977 ORTHO05D006454 6.4e-81 304.3 179 83.8
DCAR_018210 Daucus carota HOM05D004977 ORTHO05D006454 1.1e-80 303.5 181 82.9
Eucgr.J00591 Eucalyptus grandis HOM05D004977 ORTHO05D006454 1.1e-80 303.5 179 84.4
CsaV3_6G038660 Cucumis sativus L. HOM05D004977 ORTHO05D006454 1.9e-80 302.8 179 85.5
Lj3g0003647 Lotus japonicus HOM05D004977 ORTHO05D006454 2.4e-80 302.4 179 83.2
PGR044G2329 Punica granatum HOM05D004977 ORTHO05D006454 2.4e-80 302.4 178 85.4
ClCG02G022520 Citrullus lanatus HOM05D004977 ORTHO05D006454 4.2e-80 301.6 179 84.4
EL10Ac6g14670 Beta vulgaris HOM05D004977 ORTHO05D006454 7.1e-80 300.8 179 85.5
Phvul.011G100500 Phaseolus vulgaris HOM05D004977 ORTHO05D006454 7.1e-80 300.8 179 83.2
Aqoxy1G00589 Aquilegia oxysepala HOM05D004977 ORTHO05D006454 9.3e-80 300.4 179 82.7
Sabra04G0149200 Salix brachista HOM05D004977 ORTHO05D006454 1.2e-79 300.1 200 77.5
Sed0002287 Sechium edule HOM05D004977 ORTHO05D006454 1.2e-79 300.1 179 83.8
Ca_19486_v3 Cicer arietinum L. HOM05D004977 ORTHO05D006454 2.7e-79 298.9 179 81.6
Ciclev10027762m.g Citrus clementina HOM05D004977 ORTHO05D006454 3.5e-79 298.5 179 84.4
VMungo1127G1403 Vigna mungo HOM05D004977 ORTHO05D006454 3.5e-79 298.5 179 81.6
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 6.0e-79 297.7 179 81.6
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 6.0e-79 297.7 179 82.7
MD07G1072700 Malus domestica HOM05D004977 ORTHO05D006454 6.0e-79 297.7 179 82.1
Lj2C831G4 Lonicera japonica HOM05D004977 ORTHO05D006454 7.9e-79 297.4 179 83.2
Psat7g203480 Pisum sativum HOM05D004977 ORTHO05D006454 7.9e-79 297.4 179 81.6
FAN25G0235 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.3e-78 296.6 180 81.1
MD05G1047200 Malus domestica HOM05D004977 ORTHO05D006454 1.3e-78 296.6 179 83.2
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.8e-78 296.2 180 80.6
unitig_699.g19732 Utricularia gibba HOM05D004977 ORTHO05D006454 2.3e-78 295.8 179 81.0
Glyma.06G308700 Glycine max HOM05D004977 ORTHO05D006454 3.0e-78 295.4 179 82.1
Glyma.12G096100 Glycine max HOM05D004977 ORTHO05D006454 3.0e-78 295.4 179 81.6
Medtr4g050180 Medicago truncatula HOM05D004977 ORTHO05D006454 3.9e-78 295.0 179 80.4
Prupe.8G068000 Prunus persica HOM05D004977 ORTHO05D006454 5.1e-78 294.7 179 82.1
Lsat_1_v5_gn_4_27921 Lactuca sativa HOM05D004977 ORTHO05D006454 6.7e-78 294.3 179 81.6
RcHm_v2.0_Chr5g0051061 Rosa chinensis HOM05D004977 ORTHO05D006454 6.7e-78 294.3 179 83.2
ECA234G1388 Erigeron canadensis HOM05D004977 ORTHO05D006454 8.7e-78 293.9 179 83.2
FAN16G1264 Fragaria x ananassa HOM05D004977 ORTHO05D006454 8.7e-78 293.9 180 80.6
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 1.1e-77 293.5 179 81.0
arahy.Tifrunner.gnm1.ann1.78MUYP Arachis hypogaea HOM05D004977 ORTHO05D006454 3.3e-77 292.0 179 81.6
Cpa.g.sc103.53 Carica papaya HOM05D004977 ORTHO05D006454 9.6e-77 290.4 169 86.4
TPR.G4657 Trifolium pratense HOM05D004977 ORTHO05D006454 1.3e-76 290.0 178 78.7
CDE05G0645 Ceratophyllum demersum HOM05D004977 ORTHO05D006454 1.6e-76 289.7 179 79.3
Peaxi162Scf00401g00211 Petunia axillaris HOM05D004977 ORTHO05D006454 2.8e-76 288.9 179 79.9
vmacro04053 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 3.7e-76 288.5 220 69.1
vmacro14315 Vaccinium macrocarpon HOM05D004977 ORTHO05D006454 3.7e-76 288.5 210 71.9
MD02G1244400 Malus domestica HOM05D004977 ORTHO05D006454 4.8e-76 288.1 188 78.2
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 1.8e-75 286.2 178 80.3
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 4.0e-75 285.0 179 80.4
QL01p019105 Quercus lobata HOM05D004977 ORTHO05D006454 4.0e-75 285.0 179 82.1
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 5.3e-75 284.6 179 78.8
AUR62003055 Chenopodium quinoa HOM05D004977 ORTHO05D006454 1.2e-74 283.5 183 78.7
Sp6g23180 Schrenkiella parvula HOM05D004977 ORTHO05D006454 1.5e-74 283.1 179 81.6
Thhalv10012587m.g Eutrema salsugineum HOM05D004977 ORTHO05D006454 2.6e-74 282.3 179 81.0
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 2.6e-74 282.3 179 77.1
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 2.6e-74 282.3 179 77.1
ATR0697G081 Amborella trichopoda HOM05D004977 ORTHO05D006454 3.4e-74 282.0 166 84.3
AT5G22010 Arabidopsis thaliana HOM05D004977 ORTHO05D006454 4.5e-74 281.6 179 81.6
AUR62007869 Chenopodium quinoa HOM05D004977 ORTHO05D006454 4.5e-74 281.6 183 77.6
BcaB05g22754 Brassica carinata HOM05D004977 ORTHO05D006454 5.8e-74 281.2 179 79.9
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.0e-73 280.4 179 78.2
BNapus_Darmor_BZH_scaffold_38p00910 Brassica napus HOM05D004977 ORTHO05D006454 1.3e-73 280.0 179 78.8
BraA02t05635Z Brassica rapa HOM05D004977 ORTHO05D006454 1.3e-73 280.0 179 78.8
BcaC03g13854 Brassica carinata HOM05D004977 ORTHO05D006454 1.7e-73 279.6 179 78.8
BolC2t07133H Brassica oleracea HOM05D004977 ORTHO05D006454 1.7e-73 279.6 179 78.8
CANSAT25G3123 Cannabis sativa HOM05D004977 ORTHO05D006454 2.9e-73 278.9 180 77.8
CARHR191520 Cardamine hirsuta HOM05D004977 ORTHO05D006454 2.9e-73 278.9 179 80.4
AL6G32970 Arabidopsis lyrata HOM05D004977 ORTHO05D006454 3.8e-73 278.5 179 81.0
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 4.9e-73 278.1 179 75.4
PSO384G3330 Papaver somniferum HOM05D004977 ORTHO05D006454 4.9e-73 278.1 180 75.6
PSO339G5000 Papaver somniferum HOM05D004977 ORTHO05D006454 6.5e-73 277.7 180 75.0
Ah.02g126700 Amaranthus hybridus HOM05D004977 ORTHO05D006454 8.4e-73 277.3 158 88.0
BolC8t51866H Brassica oleracea HOM05D004977 ORTHO05D006454 8.4e-73 277.3 179 78.2
Os11g0572100 Oryza sativa ssp. japonica HOM05D004977 ORTHO05D006454 1.1e-72 276.9 178 75.8
Carub.0006s1965 Capsella rubella HOM05D004977 ORTHO05D006454 3.2e-72 275.4 179 79.9
Dinv21728 Davidia involucrata HOM05D004977 ORTHO05D006454 3.2e-72 275.4 163 86.5
BcaC07g41303 Brassica carinata HOM05D004977 ORTHO05D006454 9.3e-72 273.9 179 77.1
C08p43100 Brassica napus HOM05D004977 ORTHO05D006454 9.3e-72 273.9 179 77.1
arahy.Tifrunner.gnm1.ann1.7R5ZBL Arachis hypogaea HOM05D004977 ORTHO05D006454 1.2e-71 273.5 179 78.8
Zm00001eb114240 Zea mays HOM05D004977 ORTHO05D006454 1.6e-71 273.1 178 73.6
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 2.3e-70 269.2 179 74.3
COL.COLO4_16322 Corchorus olitorius HOM05D004977 ORTHO05D006454 8.5e-65 250.8 154 82.5
CAN.G1271.15 Capsicum annuum HOM05D004977 ORTHO05D006454 4.2e-64 248.4 179 69.3
Dinv18862 Davidia involucrata HOM05D004977 ORTHO05D006454 1.4e-62 243.4 174 74.7
SMO358G0615 Selaginella moellendorffii HOM05D004977 ORTHO05D006454 1.5e-61 240.0 179 66.5
AagrBONN_evm.TU.Sc2ySwM_228.4379 Anthoceros agrestis HOM05D004977 ORTHO05D006454 1.3e-60 236.9 179 63.7
Hund25154 Selenicereus undatus HOM05D004977 ORTHO05D006454 1.1e-59 233.8 143 83.2
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 1.2e-58 230.3 179 61.5
CBR_g31434 Chara braunii HOM05D004977 ORTHO05D006454 6.5e-57 224.6 179 59.8
Mapoly0030s0061 Marchantia polymorpha HOM05D004977 ORTHO05D006454 3.3e-53 212.2 178 58.4
CBR_g36402 Chara braunii HOM05D004977 ORTHO05D006454 9.7e-53 210.7 179 56.4
PRCOL_00006813 Prasinoderma coloniale HOM05D004977 ORTHO05D006454 6.5e-33 144.8 179 40.2
MCO16G356 Micromonas commoda HOM05D004977 ORTHO05D006454 8.0e-31 137.9 177 39.5
Nn1g07562 Nelumbo nucifera HOM05D004977 ORTHO05D006454 1.4e-30 137.1 94 73.4
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 5.2e-30 135.2 175 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1947 Anthoceros agrestis HOM05D004977 ORTHO05D006454 1.7e-25 120.2 174 37.9
Cfa025270 Carpinus fangiana HOM05D004977 ORTHO05D006454 9.5e-08 61.2 181 25.4


User provided reference genes

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