Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17791 Avicennia marina HOM05D000216 ORTHO05D000634 1.6e-191 672.5 332 100.0
CAN.G1648.10 Capsicum annuum HOM05D000216 ORTHO05D000634 1.7e-140 503.1 338 76.6
Solyc00g500290.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-138 496.5 338 76.0
Hma1.2p1_0414F.1_g147670 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 6.6e-137 491.1 336 76.5
unitig_91.g26496 Utricularia gibba HOM05D000216 ORTHO05D000634 2.1e-135 486.1 333 76.3
DCAR_032474 Daucus carota HOM05D000216 ORTHO05D000634 3.2e-131 472.2 339 74.3
PGR111G0086 Punica granatum HOM05D000216 ORTHO05D000634 5.1e-129 464.9 340 70.9
Atru.chr2.3403 Acer truncatum HOM05D000216 ORTHO05D000634 2.8e-127 459.1 340 69.7
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 2.3e-121 439.5 334 70.4
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 2.1e-119 433.0 338 68.3
Potri.013G140260 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.6e-114 416.8 345 67.5
ATR0187G001 Amborella trichopoda HOM05D000216 ORTHO05D000634 4.6e-114 415.2 340 67.1
CiPaw.12G031000 Carya illinoinensis HOM05D000216 ORTHO05D000634 3.0e-113 412.5 345 66.1
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.2e-111 406.4 335 68.7
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.2e-111 406.4 335 68.7
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.2e-111 406.4 335 68.7
Lsat_1_v5_gn_5_26601 Lactuca sativa HOM05D000216 ORTHO05D000634 3.7e-111 405.6 335 67.2
Hund03956 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund25862 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund27996 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund28277 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund28387 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund28559 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund28793 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund29352 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
Hund29740 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.9e-110 401.4 337 65.6
PSO548G0073 Papaver somniferum HOM05D000216 ORTHO05D000634 2.1e-106 389.8 340 63.8
Hund27560 Selenicereus undatus HOM05D000216 ORTHO05D000634 6.1e-106 388.3 337 64.4
Hund18043 Selenicereus undatus HOM05D000216 ORTHO05D000634 7.9e-106 387.9 320 66.6
Lalb_Chr09g0335361 Lupinus albus HOM05D000216 ORTHO05D000634 1.3e-105 387.1 340 62.6
Sed0000813 Sechium edule HOM05D000216 ORTHO05D000634 1.8e-105 386.7 325 65.2
BNapus_Darmor_BZH_scaffold_253p00060 Brassica napus HOM05D000216 ORTHO05D000634 3.0e-105 386.0 341 62.2
BraSC58t46405Z Brassica rapa HOM05D000216 ORTHO05D000634 3.0e-105 386.0 341 62.2
BolSC45t60937H Brassica oleracea HOM05D000216 ORTHO05D000634 6.7e-105 384.8 341 61.9
LjContig00318g0011041 Lotus japonicus HOM05D000216 ORTHO05D000634 4.3e-104 382.1 339 61.4
Medtr4g051120 Medicago truncatula HOM05D000216 ORTHO05D000634 2.2e-103 379.8 338 61.2
Hund27610 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.8e-103 378.6 337 63.8
ATCG00170 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 4.1e-102 375.6 341 61.9
HanXRQChr14g0436641 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-101 373.2 333 64.9
Migut.D01341 Erythranthe guttata HOM05D000216 ORTHO05D000634 2.7e-98 362.8 282 70.2
LjContig00489g0015528 Lotus japonicus HOM05D000216 ORTHO05D000634 1.1e-96 357.5 338 60.9
HanXRQChr00c0300g0573181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-95 353.6 292 68.8
Sed0017787 Sechium edule HOM05D000216 ORTHO05D000634 8.2e-95 351.3 325 60.9
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-88 330.9 201 82.6
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-88 330.9 201 82.6
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-88 330.9 201 82.6
Solyc00g500319.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-88 330.9 201 82.6
Hund15943 Selenicereus undatus HOM05D000216 ORTHO05D000634 8.0e-82 308.1 309 57.9
SGA_v2.0_scaffold132G34498 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-75 287.7 274 58.4
Zm00001eb436830 Zea mays HOM05D000216 ORTHO05D000634 4.0e-73 279.3 337 50.1
Hund31462 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.4e-72 276.2 233 65.7
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.1e-70 271.2 312 51.9
CsaV3_UNG207810 Cucumis sativus L. HOM05D000216 ORTHO05D000634 1.5e-59 234.2 170 70.0
Zm00001eb314280 Zea mays HOM05D000216 ORTHO05D000634 5.2e-57 225.7 287 48.4
Zm00001eb435270 Zea mays HOM05D000216 ORTHO05D000634 1.2e-56 224.6 287 48.1
Zm00001eb435480 Zea mays HOM05D000216 ORTHO05D000634 1.2e-56 224.6 287 48.1
Zm00001eb437260 Zea mays HOM05D000216 ORTHO05D000634 1.2e-56 224.6 287 48.1
BolSC29t60451H Brassica oleracea HOM05D000216 ORTHO05D000634 2.0e-56 223.8 149 72.5
SGA_v2.0_scaffold119G32689 Striga asiatica HOM05D000216 ORTHO05D000634 2.9e-55 219.9 130 83.1
arahy.Tifrunner.gnm1.ann1.N383GM Arachis hypogaea HOM05D000216 ORTHO05D000634 4.9e-55 219.2 346 43.9
BraSC140t45608Z Brassica rapa HOM05D000216 ORTHO05D000634 1.7e-52 210.7 184 62.0
HanXRQChr14g0455001 Helianthus annuus HOM05D000216 ORTHO05D000634 1.9e-51 207.2 159 73.0
Gorai.013G018800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.1e-49 201.4 163 68.7
HanXRQChr00c0313g0573471 Helianthus annuus HOM05D000216 ORTHO05D000634 5.2e-49 199.1 171 67.3
Thhalv10023328m.g Eutrema salsugineum HOM05D000216 ORTHO05D000634 2.0e-48 197.2 329 42.2
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.4e-48 196.1 128 76.6
Ah.10g027800 Amaranthus hybridus HOM05D000216 ORTHO05D000634 4.4e-48 196.1 128 76.6
MELO3C000330.2 Cucumis melo HOM05D000216 ORTHO05D000634 2.2e-47 193.7 124 74.2
BraSC143t45681Z Brassica rapa HOM05D000216 ORTHO05D000634 5.4e-46 189.1 111 79.3
Hund07969 Selenicereus undatus HOM05D000216 ORTHO05D000634 1.7e-44 184.1 138 71.0
Gorai.004G210400 Gossypium raimondii HOM05D000216 ORTHO05D000634 8.1e-42 175.3 251 45.8
Zm00001eb434960 Zea mays HOM05D000216 ORTHO05D000634 1.8e-41 174.1 199 50.3
Hund12594 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.2e-41 172.6 293 38.6
Gohir.A07G183950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.7e-39 166.4 220 49.1
Zm00001eb271610 Zea mays HOM05D000216 ORTHO05D000634 6.4e-39 165.6 188 52.1
Solyc01g056330.2 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.1e-38 164.9 124 71.0
Medtr7g116700 Medicago truncatula HOM05D000216 ORTHO05D000634 3.2e-38 163.3 296 39.9
Gohir.D08G199601 Gossypium hirsutum HOM05D000216 ORTHO05D000634 4.1e-38 162.9 250 44.0
Nn3g18112 Nelumbo nucifera HOM05D000216 ORTHO05D000634 7.1e-38 162.2 102 79.4
CAN.G1180.14 Capsicum annuum HOM05D000216 ORTHO05D000634 2.7e-37 160.2 121 67.8
Hund04024 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-37 159.8 270 43.7
Migut.G01245 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.7e-36 157.5 90 90.0
Potri.019G027720 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.0e-36 156.8 124 69.4
ClCG07G007330 Citrullus lanatus HOM05D000216 ORTHO05D000634 3.9e-36 156.4 102 72.5
Nitab4.5_0000172g0280 Nicotiana tabacum HOM05D000216 ORTHO05D000634 6.6e-36 155.6 88 84.1
PGSC0003DMG400017664 Solanum tuberosum HOM05D000216 ORTHO05D000634 6.6e-36 155.6 121 67.8
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 8.6e-36 155.2 93 82.8
BraSC140t45598Z Brassica rapa HOM05D000216 ORTHO05D000634 4.4e-32 142.9 143 58.0
Solyc08g028910.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 1.6e-29 134.4 121 61.2
Gohir.D13G016950 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.7e-29 133.7 163 52.1
Lalb_Chr06g0173011 Lupinus albus HOM05D000216 ORTHO05D000634 2.7e-29 133.7 108 62.0
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 4.6e-29 132.9 90 70.0
Eucgr.K02695 Eucalyptus grandis HOM05D000216 ORTHO05D000634 7.8e-29 132.1 110 61.8
Nitab4.5_0001761g0170 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.6e-26 123.2 75 80.0
arahy.Tifrunner.gnm1.ann1.8W122S Arachis hypogaea HOM05D000216 ORTHO05D000634 2.4e-25 120.6 219 37.9
Zm00001eb226410 Zea mays HOM05D000216 ORTHO05D000634 5.3e-25 119.4 129 51.2
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 1.0e-20 105.1 64 78.1
Medtr7g069560 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-19 101.7 165 41.8
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 3.3e-19 100.1 72 68.1
Solyc08g028920.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-18 97.4 150 41.3
HanXRQChr00c0601g0576531 Helianthus annuus HOM05D000216 ORTHO05D000634 2.8e-18 97.1 101 57.4
Migut.K00966 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.1e-17 95.1 75 65.3
Lj2C1237G1 Lonicera japonica HOM05D000216 ORTHO05D000634 1.1e-17 95.1 61 78.7
Medtr3g450720 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-17 94.4 59 76.3
Medtr5g071320 Medicago truncatula HOM05D000216 ORTHO05D000634 2.4e-17 94.0 67 68.7
TPR.G2741 Trifolium pratense HOM05D000216 ORTHO05D000634 2.9e-15 87.0 140 45.0
Zm00001eb435750 Zea mays HOM05D000216 ORTHO05D000634 4.6e-13 79.7 73 54.8
Zm00001eb437130 Zea mays HOM05D000216 ORTHO05D000634 4.6e-13 79.7 73 54.8
Zm00001eb437780 Zea mays HOM05D000216 ORTHO05D000634 4.6e-13 79.7 73 54.8
Zm00001eb438310 Zea mays HOM05D000216 ORTHO05D000634 4.6e-13 79.7 73 54.8
ClCG01G011270 Citrullus lanatus HOM05D000216 ORTHO05D000634 3.1e-09 67.0 50 68.0
arahy.Tifrunner.gnm1.ann1.RVT61B Arachis hypogaea HOM05D000216 ORTHO05D000634 2.6e-08 63.9 65 58.5
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 3.8e-07 60.1 61 54.1
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.8e-07 60.1 29 89.7
Aa31csc39G130 Aethionema arabicum HOM05D000216 ORTHO05D000634 7.1e-06 55.8 149 32.9


User provided reference genes

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