Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16679 Avicennia marina HOM05D002857 ORTHO05D007919 1.2e-149 533.1 260 100.0
Oeu013792.1 Olea europaea HOM05D002857 ORTHO05D007919 7.2e-62 241.5 264 52.3
Dinv15808 Davidia involucrata HOM05D002857 ORTHO05D007919 3.9e-52 209.1 266 47.7
SGA_v2.0_scaffold225G43045 Striga asiatica HOM05D002857 ORTHO05D007919 1.3e-50 204.1 265 46.8
Migut.B00487 Erythranthe guttata HOM05D002857 ORTHO05D007919 6.5e-47 191.8 261 46.0
GSVIVG01037836001 Vitis vinifera HOM05D002857 ORTHO05D007919 1.5e-38 164.1 275 40.4
Solyc01g107010.3 Solanum lycopersicum HOM05D002857 ORTHO05D007919 2.7e-37 159.8 271 38.7
TAR381G0324 Trochodendron aralioides HOM05D002857 ORTHO05D007919 2.7e-37 159.8 270 38.1
Sopen01g049280 Solanum pennellii HOM05D002857 ORTHO05D007919 6.8e-36 155.2 268 38.4
Thecc.02G117100 Theobroma cacao HOM05D002857 ORTHO05D007919 1.2e-35 154.5 274 38.3
Prupe.8G144900 Prunus persica HOM05D002857 ORTHO05D007919 4.4e-35 152.5 271 36.9
FAN15G1619 Fragaria x ananassa HOM05D000062 ORTHO05D007919 1.3e-34 151.0 273 35.5
PGSC0003DMG400025743 Solanum tuberosum HOM05D002857 ORTHO05D007919 1.7e-34 150.6 269 38.7
FvH4_2g04350 Fragaria vesca HOM05D002857 ORTHO05D007919 3.7e-34 149.4 274 37.2
FAN24G3289 Fragaria x ananassa HOM05D002857 ORTHO05D007919 6.3e-34 148.7 273 35.2
CiPaw.05G017900 Carya illinoinensis HOM05D002857 ORTHO05D007919 8.3e-34 148.3 273 37.4
RcHm_v2.0_Chr6g0253811 Rosa chinensis HOM05D002857 ORTHO05D007919 2.4e-33 146.7 274 34.7
CAN.G606.60 Capsicum annuum HOM05D002857 ORTHO05D007919 3.1e-33 146.4 279 38.4
Ciclev10027948m.g Citrus clementina HOM05D002857 ORTHO05D007919 4.1e-33 146.0 267 36.7
FAN27G0944 Fragaria x ananassa HOM05D002857 ORTHO05D007919 7.0e-33 145.2 272 34.9
FAN20G2596 Fragaria x ananassa HOM05D002857 ORTHO05D007919 9.1e-33 144.8 269 35.7
Cc02_g19870 Coffea canephora HOM05D002857 ORTHO05D007919 7.7e-32 141.7 279 35.1
Potri.001G293600 Populus trichocarpa HOM05D002857 ORTHO05D007919 1.7e-31 140.6 275 34.5
QL11p030559 Quercus lobata HOM05D002857 ORTHO05D007919 2.9e-31 139.8 267 37.5
Hma1.2p1_1059F.1_g252980 Hydrangea macrophylla HOM05D002857 ORTHO05D007919 4.2e-30 136.0 218 39.9
CsaV3_7G007810 Cucumis sativus L. HOM05D002857 ORTHO05D007919 7.2e-30 135.2 274 34.3
Gorai.005G231400 Gossypium raimondii HOM05D002857 ORTHO05D007919 3.6e-29 132.9 262 35.1
Gohir.A03G182500 Gossypium hirsutum HOM05D002857 ORTHO05D007919 4.7e-29 132.5 260 35.8
TWI14G1369 Tripterygium wilfordii HOM05D002857 ORTHO05D007919 6.1e-29 132.1 281 33.5
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.4e-28 131.0 247 37.7
Nn1g04560 Nelumbo nucifera HOM05D002857 ORTHO05D007919 2.3e-28 130.2 282 33.0
Sed0001102 Sechium edule HOM05D002857 ORTHO05D007919 2.3e-28 130.2 274 31.8
EL10Ac9g22200 Beta vulgaris HOM05D002857 ORTHO05D007919 3.0e-28 129.8 268 34.7
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 4.0e-28 129.4 249 36.5
Peaxi162Scf00016g02932 Petunia axillaris HOM05D002857 ORTHO05D007919 4.0e-28 129.4 135 50.4
DCAR_021953 Daucus carota HOM05D002857 ORTHO05D007919 5.2e-28 129.0 260 36.5
HanXRQChr16g0509311 Helianthus annuus HOM05D002857 ORTHO05D007919 1.2e-27 127.9 267 35.6
PSO675G1022 Papaver somniferum HOM05D002857 ORTHO05D007919 1.2e-27 127.9 262 33.2
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 7.5e-27 125.2 248 35.1
Sc14g0002920 Simmondsia chinensis HOM05D002857 ORTHO05D007919 7.5e-27 125.2 266 33.8
PSO541G1205 Papaver somniferum HOM05D002857 ORTHO05D007919 1.3e-26 124.4 265 34.3
ClCG02G006830 Citrullus lanatus HOM05D002857 ORTHO05D007919 2.2e-26 123.6 269 32.7
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.8e-25 120.6 247 34.0
Nitab4.5_0008075g0070 Nicotiana tabacum HOM05D002857 ORTHO05D007919 3.1e-25 119.8 130 50.0
Nitab4.5_0001105g0030 Nicotiana tabacum HOM05D002857 ORTHO05D007919 9.2e-25 118.2 111 54.1
Aqoxy6G02627 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.2e-24 117.9 266 33.1
THA.LOC104803441 Tarenaya hassleriana HOM05D002857 ORTHO05D007919 1.6e-24 117.5 267 32.6
Cfa004626 Carpinus fangiana HOM05D002857 ORTHO05D007919 3.5e-24 116.3 198 38.9
Sp1g36870 Schrenkiella parvula HOM05D002857 ORTHO05D007919 5.0e-23 112.5 270 31.1
SpUN0137_0010 Schrenkiella parvula HOM05D002857 ORTHO05D007919 5.0e-23 112.5 270 31.1
PGR042G1700 Punica granatum HOM05D002857 ORTHO05D007919 8.6e-23 111.7 310 33.5
arahy.Tifrunner.gnm1.ann1.Y568PT Arachis hypogaea HOM05D002857 ORTHO05D007919 1.1e-22 111.3 261 33.7
MD05G1100500 Malus domestica HOM05D002857 ORTHO05D007919 1.1e-22 111.3 221 34.4
Phvul.002G051600 Phaseolus vulgaris HOM05D002857 ORTHO05D007919 1.5e-22 110.9 264 33.0
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 1.9e-22 110.5 222 33.3
CARHR040030 Cardamine hirsuta HOM05D002857 ORTHO05D007919 2.5e-22 110.2 269 31.6
Eucgr.G01218 Eucalyptus grandis HOM05D002857 ORTHO05D007919 2.5e-22 110.2 281 34.5
Thhalv10011295m.g Eutrema salsugineum HOM05D002857 ORTHO05D007919 4.3e-22 109.4 264 30.7
Lalb_Chr05g0210781 Lupinus albus HOM05D002857 ORTHO05D007919 5.6e-22 109.0 262 32.8
Atru.chr5.2348 Acer truncatum HOM05D002857 ORTHO05D007919 7.3e-22 108.6 104 52.9
arahy.Tifrunner.gnm1.ann1.TT8B4F Arachis hypogaea HOM05D002857 ORTHO05D007919 7.3e-22 108.6 258 33.3
HPP92_015730 Vanilla planifolia HOM05D002857 ORTHO05D007919 9.5e-22 108.2 265 34.7
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 1.6e-21 107.5 212 34.0
Aa31LG10G4140 Aethionema arabicum HOM05D002857 ORTHO05D007919 2.1e-21 107.1 265 32.1
Gohir.D02G204100 Gossypium hirsutum HOM05D002857 ORTHO05D007919 2.8e-21 106.7 224 34.8
C06p04750 Brassica napus HOM05D002857 ORTHO05D007919 8.0e-21 105.1 93 49.5
Cpa.g.sc106.47 Carica papaya HOM05D002857 ORTHO05D007919 1.0e-20 104.8 142 42.3
Carub.0001s3917 Capsella rubella HOM05D002857 ORTHO05D007919 2.3e-20 103.6 93 49.5
VMungo1215G1214 Vigna mungo HOM05D002857 ORTHO05D007919 3.0e-20 103.2 261 34.9
Lj5A219G36 Lonicera japonica HOM05D002857 ORTHO05D007919 6.8e-20 102.1 95 53.7
TPR.G8313 Trifolium pratense HOM05D002857 ORTHO05D007919 1.5e-19 100.9 257 32.7
BolC6t35605H Brassica oleracea HOM05D002857 ORTHO05D007919 2.0e-19 100.5 113 44.2
Ca_24359_v3 Cicer arietinum L. HOM05D002857 ORTHO05D007919 2.0e-19 100.5 261 32.2
CDE04G2933 Ceratophyllum demersum HOM05D002857 ORTHO05D007919 2.6e-19 100.1 264 30.7
A06p03460 Brassica napus HOM05D002857 ORTHO05D007919 3.4e-19 99.8 113 44.2
BraA06t23554Z Brassica rapa HOM05D002857 ORTHO05D007919 3.4e-19 99.8 113 44.2
Psat4g227480 Pisum sativum HOM05D002857 ORTHO05D007919 3.4e-19 99.8 149 42.3
Glyma.11G001900 Glycine max HOM05D002857 ORTHO05D007919 1.3e-18 97.8 260 33.8
Hund00429 Selenicereus undatus HOM05D002857 ORTHO05D007919 6.4e-18 95.5 210 31.9
Os03g0616300 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D007919 1.1e-17 94.7 101 49.5
AUR62030846 Chenopodium quinoa HOM05D002857 ORTHO05D007919 7.0e-17 92.0 215 31.2
ECA236G3688 Erigeron canadensis HOM05D002857 ORTHO05D007919 1.2e-16 91.3 101 47.5
QL07p014111 Quercus lobata HOM05D002857 ORTHO05D007919 1.6e-16 90.9 172 34.9
AT1G49980 Arabidopsis thaliana HOM05D002857 ORTHO05D007919 2.0e-16 90.5 222 29.7
Lj1g0007638 Lotus japonicus HOM05D002857 ORTHO05D007919 1.7e-15 87.4 85 51.8
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 2.3e-15 87.0 266 27.4
MELO3C018521.2 Cucumis melo HOM05D002857 ORTHO05D007919 6.6e-15 85.5 230 28.3
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 6.6e-15 85.5 214 30.8
Glyma.01G242400 Glycine max HOM05D002857 ORTHO05D007919 1.1e-14 84.7 196 35.2
Zm00001eb219080 Zea mays HOM05D002857 ORTHO05D007919 4.3e-14 82.8 99 43.4
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 1.6e-13 80.9 116 40.5
Medtr5g005030 Medicago truncatula HOM05D002857 ORTHO05D007919 2.1e-13 80.5 274 28.8
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 8.0e-13 78.6 96 44.8
Lsat_1_v5_gn_7_85120 Lactuca sativa HOM05D002857 ORTHO05D007919 1.4e-12 77.8 136 38.2
ATR1153G103 Amborella trichopoda HOM05D002857 ORTHO05D007919 5.2e-12 75.9 50 62.0
Psat5g177040 Pisum sativum HOM05D002857 ORTHO05D007919 1.5e-11 74.3 268 29.5
SEGI_11563 Sequoiadendron giganteum HOM05D002857 ORTHO05D007919 5.8e-11 72.4 99 36.4
Cpa.g.sc1019.1 Carica papaya HOM05D002857 ORTHO05D007919 7.8e-08 62.0 49 57.1


User provided reference genes

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