Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035005.2 Cucumis melo HOM05D005361 ORTHO05D006518 1.0e-190 669.8 329 100.0
MELO3C015263.2 Cucumis melo HOM05D005361 ORTHO05D006518 1.3e-92 344.0 218 79.8
ClCG03G017650 Citrullus lanatus HOM05D005361 ORTHO05D006518 7.4e-88 328.2 218 76.1
CsaV3_1G038340 Cucumis sativus L. HOM05D005361 ORTHO05D006518 9.0e-86 321.2 218 74.8
Sed0027360 Sechium edule HOM05D005361 ORTHO05D006518 6.1e-74 282.0 218 67.0
Haze_04086 Corylus avellana HOM05D005361 ORTHO05D006518 1.0e-57 228.0 218 54.6
TWI56G0631 Tripterygium wilfordii HOM05D005361 ORTHO05D006518 3.0e-57 226.5 218 53.2
CANSAT54G2643 Cannabis sativa HOM05D005361 ORTHO05D006518 5.2e-57 225.7 217 53.5
QL03p018132 Quercus lobata HOM05D005361 ORTHO05D006518 1.5e-56 224.2 218 53.2
MD04G1195700 Malus domestica HOM05D005361 ORTHO05D006518 4.4e-56 222.6 218 51.8
MD12G1208000 Malus domestica HOM05D005361 ORTHO05D006518 4.4e-56 222.6 218 52.3
CiPaw.08G157000 Carya illinoinensis HOM05D005361 ORTHO05D006518 1.3e-55 221.1 218 52.8
CSS0043675 Camellia sinensis var. sinensis HOM05D005361 ORTHO05D006518 1.8e-54 217.2 218 51.4
COL.COLO4_04134 Corchorus olitorius HOM05D005361 ORTHO05D006518 1.6e-53 214.2 216 50.5
Glyma.10G148600 Glycine max HOM05D005361 ORTHO05D006518 2.6e-53 213.4 226 50.4
Glyma.20G239300 Glycine max HOM05D005361 ORTHO05D006518 2.6e-53 213.4 226 50.9
Prupe.6G315500 Prunus persica HOM05D005361 ORTHO05D006518 2.6e-53 213.4 218 50.9
Ca_10160_v3 Cicer arietinum L. HOM05D005361 ORTHO05D006518 3.5e-53 213.0 236 48.3
Manes.08G112700 Manihot esculenta HOM05D005361 ORTHO05D006518 5.9e-53 212.2 223 52.0
TAR362G0767 Trochodendron aralioides HOM05D005361 ORTHO05D006518 2.2e-52 210.3 219 52.1
FvH4_6g07170 Fragaria vesca HOM05D005361 ORTHO05D006518 3.8e-52 209.5 215 51.6
FAN14G4398 Fragaria x ananassa HOM05D005361 ORTHO05D006518 3.8e-52 209.5 215 51.6
Atru.chr2.142 Acer truncatum HOM05D005361 ORTHO05D006518 5.0e-52 209.1 223 50.7
Duzib177G0912 Durio zibethinus HOM05D005361 ORTHO05D006518 6.5e-52 208.8 216 50.0
Lalb_Chr02g0147921 Lupinus albus HOM05D005361 ORTHO05D006518 6.5e-52 208.8 216 49.5
Rhsim11G0093500 Rhododendron simsii HOM05D005361 ORTHO05D006518 8.5e-52 208.4 217 48.8
RcHm_v2.0_Chr3g0456811 Rosa chinensis HOM05D005361 ORTHO05D006518 8.5e-52 208.4 218 49.5
Thecc.05G320500 Theobroma cacao HOM05D005361 ORTHO05D006518 1.9e-51 207.2 231 48.1
TPR.G2615 Trifolium pratense HOM05D005361 ORTHO05D006518 1.9e-51 207.2 217 49.3
vmacro01549 Vaccinium macrocarpon HOM05D005361 ORTHO05D006518 1.9e-51 207.2 244 45.5
Gorai.013G128600 Gossypium raimondii HOM05D005361 ORTHO05D006518 2.5e-51 206.8 216 50.0
MBI18_g24951_MAGBIO Magnolia biondii HOM05D005361 ORTHO05D006518 2.5e-51 206.8 218 49.5
FAN05G4787 Fragaria x ananassa HOM05D005361 ORTHO05D006518 5.5e-51 205.7 215 51.2
FAN09G0306 Fragaria x ananassa HOM05D005361 ORTHO05D006518 5.5e-51 205.7 215 51.2
Psat0s1118g0080 Pisum sativum HOM05D005361 ORTHO05D006518 5.5e-51 205.7 222 47.3
Phvul.007G200000 Phaseolus vulgaris HOM05D005361 ORTHO05D006518 9.4e-51 204.9 227 49.8
Hund07131 Selenicereus undatus HOM05D005361 ORTHO05D006518 9.4e-51 204.9 218 47.2
Lj9A208G25 Lonicera japonica HOM05D005361 ORTHO05D006518 1.6e-50 204.1 218 50.5
VMungo0720G2281 Vigna mungo HOM05D005361 ORTHO05D006518 1.6e-50 204.1 227 49.3
CiPaw.07G027300 Carya illinoinensis HOM05D005361 ORTHO05D006518 2.1e-50 203.8 218 51.4
arahy.Tifrunner.gnm1.ann1.77BPS2 Arachis hypogaea HOM05D005361 ORTHO05D006518 2.7e-50 203.4 228 47.4
arahy.Tifrunner.gnm1.ann1.1QQ1RG Arachis hypogaea HOM05D005361 ORTHO05D006518 3.6e-50 203.0 232 47.0
Gohir.D13G114500 Gossypium hirsutum HOM05D005361 ORTHO05D006518 4.7e-50 202.6 210 50.5
Lj5g0016289 Lotus japonicus HOM05D005361 ORTHO05D006518 8.0e-50 201.8 221 47.5
GSVIVG01031212001 Vitis vinifera HOM05D005361 ORTHO05D006518 1.0e-49 201.4 218 48.6
Potri.005G020000 Populus trichocarpa HOM05D005361 ORTHO05D006518 1.4e-49 201.1 229 49.8
AUR62005265 Chenopodium quinoa HOM05D005361 ORTHO05D006518 1.8e-49 200.7 228 46.5
Lsat_1_v5_gn_5_102760 Lactuca sativa HOM05D005361 ORTHO05D006518 4.0e-49 199.5 218 47.2
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 4.0e-49 199.5 218 48.6
Sopen01g043780 Solanum pennellii HOM05D005361 ORTHO05D006518 5.2e-49 199.1 231 46.3
Lalb_Chr21g0310361 Lupinus albus HOM05D005361 ORTHO05D006518 1.5e-48 197.6 221 47.1
Solyc01g100270.4 Solanum lycopersicum HOM05D005361 ORTHO05D006518 1.5e-48 197.6 231 45.5
RcHm_v2.0_Chr7g0235801 Rosa chinensis HOM05D005361 ORTHO05D006518 2.0e-48 197.2 217 48.8
Aqoxy6G02436 Aquilegia oxysepala HOM05D005361 ORTHO05D006518 2.6e-48 196.8 218 47.7
Actinidia35531 Actinidia chinensis HOM05D005361 ORTHO05D006518 4.4e-48 196.1 218 46.3
Cpa.g.sc48.138 Carica papaya HOM05D005361 ORTHO05D006518 4.4e-48 196.1 218 48.6
Gohir.A13G111600 Gossypium hirsutum HOM05D005361 ORTHO05D006518 5.7e-48 195.7 216 48.6
HanXRQChr10g0299251 Helianthus annuus HOM05D005361 ORTHO05D006518 9.7e-48 194.9 218 45.9
Ah.06g189010 Amaranthus hybridus HOM05D005361 ORTHO05D006518 1.3e-47 194.5 218 45.9
MSTRG.27959 Avicennia marina HOM05D005361 ORTHO05D006518 8.2e-47 191.8 218 46.3
FAN08G1915 Fragaria x ananassa HOM05D005361 ORTHO05D006518 1.1e-46 191.4 229 46.7
THA.LOC104805911 Tarenaya hassleriana HOM05D005361 ORTHO05D006518 2.4e-46 190.3 218 46.8
FAN04G2120 Fragaria x ananassa HOM05D005361 ORTHO05D006518 3.1e-46 189.9 228 46.5
SGA_v2.0_scaffold80G25882 Striga asiatica HOM05D005361 ORTHO05D006518 3.1e-46 189.9 223 44.8
Sc09g0002730 Simmondsia chinensis HOM05D005361 ORTHO05D006518 4.1e-46 189.5 218 45.4
FvH4_5g34880 Fragaria vesca HOM05D005361 ORTHO05D006518 5.3e-46 189.1 228 46.5
Nn3g21622 Nelumbo nucifera HOM05D005361 ORTHO05D006518 5.3e-46 189.1 218 47.2
Atru.chr2.137 Acer truncatum HOM05D005361 ORTHO05D006518 2.0e-45 187.2 153 60.8
Lj5C338G3 Lonicera japonica HOM05D005361 ORTHO05D006518 2.0e-45 187.2 259 41.3
Dinv30866 Davidia involucrata HOM05D005361 ORTHO05D006518 3.5e-45 186.4 192 50.0
PSO170G3617 Papaver somniferum HOM05D005361 ORTHO05D006518 7.7e-45 185.3 223 44.8
TAR365G0822 Trochodendron aralioides HOM05D005361 ORTHO05D006518 1.3e-44 184.5 225 45.8
AUR62000693 Chenopodium quinoa HOM05D005361 ORTHO05D006518 2.9e-44 183.3 151 57.0
PSO357G0277 Papaver somniferum HOM05D005361 ORTHO05D006518 2.9e-44 183.3 223 44.4
Migut.N02108 Erythranthe guttata HOM05D005361 ORTHO05D006518 3.8e-44 183.0 217 44.2
Cc02_g34760 Coffea canephora HOM05D005361 ORTHO05D006518 8.5e-44 181.8 217 44.7
Oeu053699.1 Olea europaea HOM05D005361 ORTHO05D006518 8.5e-44 181.8 229 42.4
PGR083G2525 Punica granatum HOM05D005361 ORTHO05D006518 1.1e-43 181.4 153 58.8
ECA234G3067 Erigeron canadensis HOM05D005361 ORTHO05D006518 4.2e-43 179.5 218 42.7
SalBow3G1325 Salvia bowleyana HOM05D005361 ORTHO05D006518 4.2e-43 179.5 217 42.4
A09p19140 Brassica napus HOM05D005361 ORTHO05D006518 7.2e-43 178.7 218 44.0
BraA09t37532Z Brassica rapa HOM05D005361 ORTHO05D006518 7.2e-43 178.7 218 44.0
CARHR289850 Cardamine hirsuta HOM05D005361 ORTHO05D006518 7.2e-43 178.7 218 45.0
Aa31LG2G11550 Aethionema arabicum HOM05D005361 ORTHO05D006518 2.1e-42 177.2 218 44.0
C09p24140 Brassica napus HOM05D005361 ORTHO05D006518 2.1e-42 177.2 218 43.6
BolC9t55332H Brassica oleracea HOM05D005361 ORTHO05D006518 2.1e-42 177.2 218 43.6
Sp2g06550 Schrenkiella parvula HOM05D005361 ORTHO05D006518 2.1e-42 177.2 218 43.6
Thhalv10023373m.g Eutrema salsugineum HOM05D005361 ORTHO05D006518 2.7e-42 176.8 218 44.5
AT1G56310 Arabidopsis thaliana HOM05D005361 ORTHO05D006518 4.7e-42 176.0 218 43.1
AL1G65920 Arabidopsis lyrata HOM05D005361 ORTHO05D006518 6.1e-42 175.6 218 43.1
BcaC04g22042 Brassica carinata HOM05D005361 ORTHO05D006518 6.1e-42 175.6 218 43.1
Carub.0002s0785 Capsella rubella HOM05D005361 ORTHO05D006518 1.4e-41 174.5 218 43.6
Actinidia16845 Actinidia chinensis HOM05D005361 ORTHO05D006518 2.3e-41 173.7 151 56.3
BcaB07g31118 Brassica carinata HOM05D005361 ORTHO05D006518 5.2e-41 172.6 218 42.7
DCAR_005413 Daucus carota HOM05D005361 ORTHO05D006518 5.2e-41 172.6 218 43.1
Peaxi162Scf00673g00026 Petunia axillaris HOM05D005361 ORTHO05D006518 1.3e-39 167.9 239 40.6
ATR0706G045 Amborella trichopoda HOM05D005361 ORTHO05D006518 1.4e-38 164.5 245 41.6
HPP92_001070 Vanilla planifolia HOM05D005361 ORTHO05D006518 3.1e-38 163.3 218 43.6
Os05g0357100 Oryza sativa ssp. japonica HOM05D005361 ORTHO05D006518 2.0e-37 160.6 218 39.4
Ciclev10000759m.g Citrus clementina HOM05D005361 ORTHO05D006518 4.2e-35 152.9 223 40.4
CAN.G1273.4 Capsicum annuum HOM05D005361 ORTHO05D006518 2.8e-34 150.2 231 38.5
Zm00001eb347420 Zea mays HOM05D005361 ORTHO05D006518 3.0e-33 146.7 218 37.2
Nitab4.5_0006072g0040 Nicotiana tabacum HOM05D005361 ORTHO05D006518 3.4e-32 143.3 230 36.5
DCAR_025270 Daucus carota HOM05D005361 ORTHO05D006518 2.7e-29 133.7 229 38.4
Oeu064805.1 Olea europaea HOM05D005361 ORTHO05D006518 1.7e-28 131.0 134 50.0
SHI18068 Sapria himalayana HOM05D005361 ORTHO05D006518 4.3e-27 126.3 141 43.3
PGSC0003DMG400002810 Solanum tuberosum HOM05D005361 ORTHO05D006518 4.9e-23 112.8 231 33.3
PSO832G4367 Papaver somniferum HOM05D005361 ORTHO05D006518 6.6e-20 102.4 120 40.0
SEGI_28492 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 8.6e-20 102.1 134 38.8
Nitab4.5_0000368g0310 Nicotiana tabacum HOM05D005361 ORTHO05D006518 1.5e-19 101.3 230 30.4
MELO3C034824.2 Cucumis melo HOM05D005361 ORTHO05D006518 1.8e-17 94.4 48 87.5
Migut.H01140 Erythranthe guttata HOM05D005361 ORTHO05D006518 2.3e-17 94.0 84 52.4
unitig_0.g2322 Utricularia gibba HOM05D005361 ORTHO05D006518 3.4e-16 90.1 124 41.1
Mapoly0054s0112 Marchantia polymorpha HOM05D005361 ORTHO05D006518 2.2e-15 87.4 232 27.6
SEGI_17557 Sequoiadendron giganteum HOM05D005361 ORTHO05D006518 1.4e-14 84.7 122 36.1
PSO591G0378 Papaver somniferum HOM05D005361 ORTHO05D006518 1.9e-11 74.3 208 26.4


User provided reference genes

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