Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1245100 Malus domestica HOM05D005767 ORTHO05D006785 1.3e-90 336.3 163 100.0
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 9.8e-33 144.1 160 56.9
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 2.2e-32 142.9 160 56.2
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.2e-32 142.9 160 56.2
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.2e-32 142.9 160 56.2
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 4.8e-32 141.7 145 60.0
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.1e-31 140.6 160 55.6
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 1.1e-31 140.6 163 57.1
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 1.7e-29 133.3 166 53.0
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 2.3e-29 132.9 149 53.7
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 2.9e-29 132.5 159 50.9
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 2.9e-29 132.5 166 52.4
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 3.8e-29 132.1 166 52.4
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 3.8e-29 132.1 145 55.2
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 6.6e-29 131.3 145 55.9
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 6.6e-29 131.3 145 55.9
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 6.6e-29 131.3 149 53.7
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 8.6e-29 131.0 152 54.6
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 1.5e-28 130.2 143 55.2
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 1.5e-28 130.2 145 55.9
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 1.5e-28 130.2 145 55.2
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 1.5e-28 130.2 145 54.5
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 2.5e-28 129.4 145 54.5
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 2.5e-28 129.4 145 55.9
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 3.3e-28 129.0 145 54.5
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 4.2e-28 128.6 160 50.6
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 5.5e-28 128.3 145 54.5
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 5.5e-28 128.3 149 54.4
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 5.5e-28 128.3 145 54.5
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 7.2e-28 127.9 145 53.8
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 7.2e-28 127.9 145 53.8
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 7.2e-28 127.9 145 55.2
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 7.2e-28 127.9 145 54.5
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 9.5e-28 127.5 145 54.5
Lalb_Chr05g0229861 Lupinus albus HOM05D005767 ORTHO05D006785 9.5e-28 127.5 145 53.8
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 1.6e-27 126.7 145 52.4
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 2.8e-27 125.9 146 52.1
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 2.8e-27 125.9 149 52.3
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.6e-27 125.6 145 53.1
GSVIVG01018776001 Vitis vinifera HOM05D005767 ORTHO05D006785 3.6e-27 125.6 145 53.1
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 4.7e-27 125.2 145 53.1
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 6.1e-27 124.8 145 52.4
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 8.0e-27 124.4 145 52.4
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 8.0e-27 124.4 145 51.7
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 1.0e-26 124.0 145 52.4
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 1.4e-26 123.6 150 50.7
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 2.3e-26 122.9 145 51.7
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 2.3e-26 122.9 149 49.7
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 3.0e-26 122.5 149 52.3
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 4.0e-26 122.1 145 51.0
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 5.2e-26 121.7 145 53.8
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 5.2e-26 121.7 148 50.0
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 6.8e-26 121.3 169 46.7
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 6.8e-26 121.3 145 51.7
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 8.9e-26 120.9 146 51.4
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 1.2e-25 120.6 145 52.4
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 1.5e-25 120.2 145 52.4
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 1.5e-25 120.2 147 50.3
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 2.0e-25 119.8 145 51.7
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 2.0e-25 119.8 146 53.4
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 2.6e-25 119.4 145 51.7
FAN28G0764 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.6e-25 119.4 164 51.8
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 3.4e-25 119.0 145 51.0
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 3.4e-25 119.0 145 51.0
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 3.4e-25 119.0 145 50.3
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 4.4e-25 118.6 139 53.2
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 4.4e-25 118.6 145 50.3
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 7.5e-25 117.9 139 52.5
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 7.5e-25 117.9 146 52.7
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 1.7e-24 116.7 149 51.7
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 1.7e-24 116.7 169 45.6
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.2e-24 116.3 145 49.0
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 2.8e-24 115.9 149 48.3
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 2.8e-24 115.9 145 51.7
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 1.8e-23 113.2 157 48.4
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 2.4e-23 112.8 147 51.0
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 3.2e-23 112.5 149 49.7
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 4.1e-23 112.1 149 47.0
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 7.0e-23 111.3 147 51.0
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 2.0e-22 109.8 147 51.0
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 3.5e-22 109.0 143 48.3
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 1.7e-21 106.7 146 50.0
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 2.3e-21 106.3 149 49.7
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 2.3e-21 106.3 74 75.7
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 3.3e-20 102.4 138 48.6
Sc16g0002220 Simmondsia chinensis HOM05D005767 ORTHO05D006785 4.3e-20 102.1 73 74.0
Glyma.16G128500 Glycine max HOM05D005767 ORTHO05D006785 5.6e-20 101.7 73 74.0
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 6.1e-19 98.2 149 43.6
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 2.6e-17 92.8 155 40.0
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 2.9e-16 89.4 145 42.1
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 6.0e-14 81.6 155 38.7
Cre12.g532750 Chlamydomonas reinhardtii HOM05D005767 ORTHO05D006785 2.8e-11 72.8 145 39.3
MBI09_g09411_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 5.4e-07 58.5 48 62.5
Eucgr.I02345 Eucalyptus grandis HOM05D005767 ORTHO05D006785 7.1e-07 58.2 36 69.4
MBI09_g45348_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 7.1e-07 58.2 95 42.1
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 2.1e-06 56.6 95 42.1


User provided reference genes

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