Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD15G1244800 Malus domestica HOM05D005767 ORTHO05D006785 1.0e-137 493.4 258 100.0
MD02G1131900 Malus domestica HOM05D005767 ORTHO05D006785 9.5e-91 337.4 237 78.1
Prupe.7G168600 Prunus persica HOM05D005767 ORTHO05D006785 2.1e-85 319.7 238 73.1
RcHm_v2.0_Chr2g0099381 Rosa chinensis HOM05D005767 ORTHO05D006785 2.1e-58 229.9 241 61.8
FvH4_1g11761 Fragaria vesca HOM05D005767 ORTHO05D006785 6.5e-55 218.4 243 60.1
FAN19G2575 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.1e-54 217.6 243 60.1
FAN26G3405 Fragaria x ananassa HOM05D005767 ORTHO05D006785 1.5e-51 207.2 244 57.8
Haze_03760 Corylus avellana HOM05D005767 ORTHO05D006785 9.3e-46 188.0 240 50.0
Dinv33631 Davidia involucrata HOM05D005767 ORTHO05D006785 3.9e-44 182.6 248 48.0
COL.COLO4_21902 Corchorus olitorius HOM05D005767 ORTHO05D006785 5.7e-43 178.7 241 48.5
QL06p032910 Quercus lobata HOM05D005767 ORTHO05D006785 4.5e-40 169.1 248 45.2
Cpa.g.sc6.256 Carica papaya HOM05D005767 ORTHO05D006785 5.0e-39 165.6 248 44.8
TAR376G0924 Trochodendron aralioides HOM05D005767 ORTHO05D006785 1.1e-38 164.5 261 47.1
Duzib147G1641 Durio zibethinus HOM05D005767 ORTHO05D006785 1.4e-38 164.1 246 44.7
Thecc.01G018100 Theobroma cacao HOM05D005767 ORTHO05D006785 1.4e-38 164.1 247 44.1
Manes.01G146000 Manihot esculenta HOM05D005767 ORTHO05D006785 3.6e-37 159.5 251 44.2
MELO3C007906.2 Cucumis melo HOM05D005767 ORTHO05D006785 3.0e-36 156.4 247 44.9
Potri.007G057400 Populus trichocarpa HOM05D005767 ORTHO05D006785 8.8e-36 154.8 252 43.7
Gorai.007G194300 Gossypium raimondii HOM05D005767 ORTHO05D006785 4.8e-34 149.1 270 39.6
Sabra07G0049300 Salix brachista HOM05D005767 ORTHO05D006785 6.3e-34 148.7 252 42.1
CSS0010624 Camellia sinensis var. sinensis HOM05D005767 ORTHO05D006785 1.4e-33 147.5 249 43.0
Gohir.D11G182500 Gossypium hirsutum HOM05D005767 ORTHO05D006785 1.4e-33 147.5 277 40.1
Gohir.A11G175000 Gossypium hirsutum HOM05D005767 ORTHO05D006785 2.4e-33 146.7 270 38.9
Atru.chr3.804 Acer truncatum HOM05D005767 ORTHO05D006785 1.5e-32 144.1 246 43.5
TWI73G0295 Tripterygium wilfordii HOM05D005767 ORTHO05D006785 4.5e-32 142.5 242 44.2
ClCG01G020330 Citrullus lanatus HOM05D005767 ORTHO05D006785 1.7e-31 140.6 246 44.7
Actinidia22973 Actinidia chinensis HOM05D005767 ORTHO05D006785 5.0e-31 139.0 253 41.5
CsaV3_6G047130 Cucumis sativus L. HOM05D005767 ORTHO05D006785 2.5e-30 136.7 246 43.9
Phvul.003G261600 Phaseolus vulgaris HOM05D005767 ORTHO05D006785 2.5e-30 136.7 248 43.1
VMungo0251G0680 Vigna mungo HOM05D005767 ORTHO05D006785 5.5e-30 135.6 245 42.9
Ciclev10025146m.g Citrus clementina HOM05D005767 ORTHO05D006785 6.1e-29 132.1 264 40.5
Cc07_g10770 Coffea canephora HOM05D005767 ORTHO05D006785 2.3e-28 130.2 195 46.7
Rhsim10G0211700 Rhododendron simsii HOM05D005767 ORTHO05D006785 2.0e-27 127.1 256 39.8
Lj4g0015609 Lotus japonicus HOM05D005767 ORTHO05D006785 3.3e-27 126.3 242 40.5
Sed0019779 Sechium edule HOM05D005767 ORTHO05D006785 4.4e-27 125.9 246 41.5
CiPaw.07G058900 Carya illinoinensis HOM05D005767 ORTHO05D006785 2.8e-26 123.2 239 38.9
Oeu035312.2 Olea europaea HOM05D005767 ORTHO05D006785 2.8e-26 123.2 247 38.5
Peaxi162Scf00050g00215 Petunia axillaris HOM05D005767 ORTHO05D006785 4.8e-26 122.5 246 37.4
Eucgr.I02343 Eucalyptus grandis HOM05D005767 ORTHO05D006785 1.1e-25 121.3 248 40.3
vmacro22135 Vaccinium macrocarpon HOM05D005767 ORTHO05D006785 1.1e-25 121.3 224 39.7
Nn1g05917 Nelumbo nucifera HOM05D005767 ORTHO05D006785 1.4e-25 120.9 260 40.0
Lj2C469G1 Lonicera japonica HOM05D005767 ORTHO05D006785 1.2e-24 117.9 241 38.6
Medtr8g075810 Medicago truncatula HOM05D005767 ORTHO05D006785 2.0e-24 117.1 248 37.9
Nitab4.5_0006119g0040 Nicotiana tabacum HOM05D005767 ORTHO05D006785 2.6e-24 116.7 140 47.9
Lalb_Chr05g0229851 Lupinus albus HOM05D005767 ORTHO05D006785 3.5e-24 116.3 238 39.5
arahy.Tifrunner.gnm1.ann1.G0D851 Arachis hypogaea HOM05D005767 ORTHO05D006785 4.5e-24 115.9 241 39.8
Psat4g100320 Pisum sativum HOM05D005767 ORTHO05D006785 2.2e-23 113.6 243 37.9
Glyma.02G048200 Glycine max HOM05D005767 ORTHO05D006785 2.9e-23 113.2 206 38.3
arahy.Tifrunner.gnm1.ann1.12F6XV Arachis hypogaea HOM05D005767 ORTHO05D006785 3.8e-23 112.8 244 40.2
Nitab4.5_0000438g0060 Nicotiana tabacum HOM05D005767 ORTHO05D006785 1.5e-22 110.9 140 47.1
DCAR_026000 Daucus carota HOM05D005767 ORTHO05D006785 9.4e-22 108.2 245 35.5
TPR.G27975 Trifolium pratense HOM05D005767 ORTHO05D006785 1.2e-21 107.8 245 38.0
Ca_22378_v3 Cicer arietinum L. HOM05D005767 ORTHO05D006785 2.7e-21 106.7 248 37.9
Solyc03g033530.4 Solanum lycopersicum HOM05D005767 ORTHO05D006785 3.6e-21 106.3 196 41.3
Sc16g0002260 Simmondsia chinensis HOM05D005767 ORTHO05D006785 6.1e-21 105.5 244 34.8
Sopen03g006310 Solanum pennellii HOM05D005767 ORTHO05D006785 6.1e-21 105.5 186 40.3
Hund16493 Selenicereus undatus HOM05D005767 ORTHO05D006785 1.0e-20 104.8 252 34.9
SGA_v2.0_scaffold76G25121 Striga asiatica HOM05D005767 ORTHO05D006785 1.4e-20 104.4 252 34.9
Migut.N01741 Erythranthe guttata HOM05D005767 ORTHO05D006785 4.0e-20 102.8 247 34.0
Sp7g33830 Schrenkiella parvula HOM05D005767 ORTHO05D006785 5.2e-20 102.4 249 35.3
CAN.G1735.5 Capsicum annuum HOM05D005767 ORTHO05D006785 2.6e-19 100.1 240 35.4
AUR62003364 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.3e-19 99.8 247 36.0
MSTRG.23406 Avicennia marina HOM05D005767 ORTHO05D006785 4.4e-19 99.4 141 43.3
GSVIVG01018775001 Vitis vinifera HOM05D005767 ORTHO05D006785 5.7e-19 99.0 86 57.0
PGR119G2148 Punica granatum HOM05D005767 ORTHO05D006785 7.5e-19 98.6 241 36.1
Thhalv10024709m.g Eutrema salsugineum HOM05D005767 ORTHO05D006785 1.3e-18 97.8 244 36.9
AUR62029469 Chenopodium quinoa HOM05D005767 ORTHO05D006785 3.7e-18 96.3 248 35.5
ECA232G4495 Erigeron canadensis HOM05D005767 ORTHO05D006785 3.7e-18 96.3 214 40.7
Aqoxy6G02211 Aquilegia oxysepala HOM05D005767 ORTHO05D006785 6.3e-18 95.5 262 34.7
unitig_32.g10945 Utricularia gibba HOM05D005767 ORTHO05D006785 1.1e-17 94.7 242 36.4
Aa31LG6G13010 Aethionema arabicum HOM05D005767 ORTHO05D006785 1.2e-16 91.3 138 44.9
Ah.03g148810 Amaranthus hybridus HOM05D005767 ORTHO05D006785 1.2e-16 91.3 241 34.4
AT4G36050 Arabidopsis thaliana HOM05D005767 ORTHO05D006785 1.2e-16 91.3 253 34.0
PSO541G2118 Papaver somniferum HOM05D005767 ORTHO05D006785 1.6e-16 90.9 249 34.1
AL7G15000 Arabidopsis lyrata HOM05D005767 ORTHO05D006785 2.7e-16 90.1 246 31.7
Eucgr.I02344 Eucalyptus grandis HOM05D005767 ORTHO05D006785 2.7e-16 90.1 225 37.8
HanXRQChr09g0256711 Helianthus annuus HOM05D005767 ORTHO05D006785 4.5e-16 89.4 144 45.1
Lsat_1_v5_gn_4_144841 Lactuca sativa HOM05D005767 ORTHO05D006785 1.3e-15 87.8 238 34.0
HPP92_005447 Vanilla planifolia HOM05D005767 ORTHO05D006785 1.3e-15 87.8 262 33.2
C01p02980 Brassica napus HOM05D005767 ORTHO05D006785 1.7e-15 87.4 80 57.5
A01p02680 Brassica napus HOM05D005767 ORTHO05D006785 3.8e-15 86.3 55 69.1
BolC1t00284H Brassica oleracea HOM05D005767 ORTHO05D006785 3.8e-15 86.3 55 69.1
CDE04G0100 Ceratophyllum demersum HOM05D005767 ORTHO05D006785 3.8e-15 86.3 240 34.2
BcaNung00769 Brassica carinata HOM05D005767 ORTHO05D006785 5.0e-15 85.9 72 58.3
MBI09_g09407_MAGBIO Magnolia biondii HOM05D005767 ORTHO05D006785 1.1e-14 84.7 246 33.3
Carub.0007s0418 Capsella rubella HOM05D005767 ORTHO05D006785 5.5e-14 82.4 249 32.5
CARHR244450 Cardamine hirsuta HOM05D005767 ORTHO05D006785 5.5e-14 82.4 49 73.5
SHI08521 Sapria himalayana HOM05D000565 ORTHO05D002009 2.7e-13 80.1 165 38.2
Os09g0536000 Oryza sativa ssp. japonica HOM05D005767 ORTHO05D006785 8.8e-12 75.1 171 33.9
Mapoly0107s0007 Marchantia polymorpha HOM05D005767 ORTHO05D006785 1.3e-10 71.2 65 53.8
FAN26G2808 Fragaria x ananassa HOM05D005767 ORTHO05D006785 2.8e-10 70.1 103 51.5
ATR0810G226 Amborella trichopoda HOM05D005767 ORTHO05D006785 8.3e-10 68.6 151 35.8
SMO356G0595 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 1.8e-09 67.4 48 54.2
BraA01t00254Z Brassica rapa HOM05D005767 ORTHO05D006785 2.4e-09 67.0 244 31.6
CBR_g18710 Chara braunii HOM05D005767 ORTHO05D006785 1.0e-07 61.6 48 56.2
SEGI_27797 Sequoiadendron giganteum HOM05D005767 ORTHO05D006785 2.2e-07 60.5 249 27.7
Pp3c17_13320 Physcomitrium patens HOM05D005767 ORTHO05D006785 6.5e-07 58.9 123 33.3
SMO356G0427 Selaginella moellendorffii HOM05D005767 ORTHO05D006785 5.5e-06 55.8 45 51.1
AagrBONN_evm.TU.Sc2ySwM_344.3375 Anthoceros agrestis HOM05D005767 ORTHO05D006785 7.2e-06 55.5 152 32.2


User provided reference genes

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