Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD14G1219700 Malus domestica HOM05D000251 ORTHO05D007889 0.0e+00 1790.8 991 100.0
MD06G1209200 Malus domestica HOM05D000251 ORTHO05D007889 0.0e+00 1655.6 991 91.4
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 0.0e+00 1454.9 908 83.3
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 0.0e+00 1318.1 904 77.4
FvH4_5g12911 Fragaria vesca HOM05D000251 ORTHO05D007889 0.0e+00 1283.5 907 75.3
FAN13G2548 Fragaria x ananassa HOM05D000251 ORTHO05D000414 0.0e+00 1262.3 885 75.9
FAN18G2230 Fragaria x ananassa HOM05D000251 ORTHO05D007889 0.0e+00 1259.2 859 77.3
QL10p022316 Quercus lobata HOM05D000251 ORTHO05D007889 0.0e+00 1208.4 912 70.6
FAN18G3790 Fragaria x ananassa HOM05D000251 ORTHO05D007889 0.0e+00 1206.4 943 69.9
Cfa019845 Carpinus fangiana HOM05D000251 ORTHO05D007889 0.0e+00 1189.1 935 68.2
CiPaw.15G123200 Carya illinoinensis HOM05D000251 ORTHO05D007889 0.0e+00 1181.4 917 68.7
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 0.0e+00 1145.6 858 70.5
GSVIVG01008206001 Vitis vinifera HOM05D000251 ORTHO05D007889 0.0e+00 1118.6 848 69.3
Thecc.03G114900 Theobroma cacao HOM05D000251 ORTHO05D007889 0.0e+00 1115.9 912 66.9
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 0.0e+00 1110.1 827 70.9
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 0.0e+00 1108.2 916 65.3
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 0.0e+00 1105.5 919 65.9
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 0.0e+00 1097.8 909 66.1
Atru.chr9.705 Acer truncatum HOM05D000251 ORTHO05D007889 0.0e+00 1097.0 892 66.4
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 0.0e+00 1092.4 926 64.4
Ciclev10018692m.g Citrus clementina HOM05D000251 ORTHO05D007889 0.0e+00 1089.7 921 65.0
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 0.0e+00 1084.3 911 64.4
CsaV3_1G003490 Cucumis sativus L. HOM05D000251 ORTHO05D007889 1.4e-311 1073.2 920 64.2
TWI81G0067 Tripterygium wilfordii HOM05D000251 ORTHO05D007889 2.0e-311 1072.4 849 67.8
Nn4g23656 Nelumbo nucifera HOM05D000251 ORTHO05D007889 2.3e-310 1068.9 912 63.7
Lj9C433G11 Lonicera japonica HOM05D000251 ORTHO05D007889 5.7e-309 1064.3 879 65.4
Potri.012G058100 Populus trichocarpa HOM05D000251 ORTHO05D007889 6.5e-305 1050.8 920 63.7
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 6.5e-305 1050.8 830 67.0
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 9.4e-304 1047.0 915 63.2
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 3.6e-303 1045.0 926 61.9
Sed0011411 Sechium edule HOM05D000251 ORTHO05D007889 4.6e-303 1044.6 912 62.8
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.4e-302 1043.1 922 61.9
PGR044G2008 Punica granatum HOM05D000251 ORTHO05D007889 2.3e-302 1042.3 814 68.3
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 1.1e-301 1040.0 923 61.9
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 5.3e-299 1031.2 917 60.0
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 9.1e-299 1030.4 813 65.7
Lalb_Chr12g0197521 Lupinus albus HOM05D000251 ORTHO05D007889 1.0e-297 1026.9 912 60.5
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 1.1e-296 1023.5 950 60.2
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 3.2e-296 1021.9 935 59.3
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 1.2e-295 1020.0 914 61.2
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 4.7e-295 1018.1 921 60.8
ClCG06G015150 Citrullus lanatus HOM05D000251 ORTHO05D007889 7.9e-295 1017.3 938 60.8
Glyma.17G123700 Glycine max HOM05D000251 ORTHO05D007889 7.9e-295 1017.3 920 59.5
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 1.4e-294 1016.5 910 59.8
Ca_02522_v3 Cicer arietinum L. HOM05D000251 ORTHO05D007889 1.1e-293 1013.4 916 60.3
Lj4g0022759 Lotus japonicus HOM05D000251 ORTHO05D007889 1.1e-293 1013.4 911 59.6
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 5.3e-291 1004.6 835 63.7
Nitab4.5_0000646g0050 Nicotiana tabacum HOM05D000251 ORTHO05D007889 1.1e-288 996.9 918 59.4
Manes.05G117300 Manihot esculenta HOM05D000251 ORTHO05D007889 1.5e-288 996.5 743 70.4
MELO3C017274.2 Cucumis melo HOM05D000251 ORTHO05D007889 2.5e-288 995.7 918 61.0
DCAR_015126 Daucus carota HOM05D000251 ORTHO05D007889 3.2e-288 995.3 919 61.5
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 8.0e-287 990.7 927 59.3
Peaxi162Scf00017g03036 Petunia axillaris HOM05D000251 ORTHO05D007889 2.3e-286 989.2 933 59.3
Eucgr.K02644 Eucalyptus grandis HOM05D000251 ORTHO05D007889 4.0e-286 988.4 914 60.9
TPR.G2793 Trifolium pratense HOM05D000251 ORTHO05D007889 4.8e-284 981.5 910 58.4
Aqoxy3G00409 Aquilegia oxysepala HOM05D000251 ORTHO05D007889 1.4e-283 979.9 913 59.7
EL10Ac5g11229 Beta vulgaris HOM05D000251 ORTHO05D007889 1.6e-282 976.5 811 62.9
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 3.6e-279 965.3 813 63.7
Solyc03g114410.3 Solanum lycopersicum HOM05D000251 ORTHO05D007889 8.0e-279 964.1 906 58.7
Sopen03g033510 Solanum pennellii HOM05D000251 ORTHO05D007889 1.0e-278 963.8 886 59.8
AUR62036928 Chenopodium quinoa HOM05D000251 ORTHO05D007889 1.8e-278 963.0 838 61.2
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 4.4e-277 958.4 902 58.1
ECA246G2449 Erigeron canadensis HOM05D000251 ORTHO05D007889 3.7e-276 955.3 867 61.1
Hund02531 Selenicereus undatus HOM05D000251 ORTHO05D007889 7.0e-275 951.0 842 62.0
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 3.5e-274 948.7 894 59.4
PSO017G5760 Papaver somniferum HOM05D000251 ORTHO05D007889 2.2e-273 946.0 919 58.8
SGA_v2.0_scaffold283G46981 Striga asiatica HOM05D000251 ORTHO05D007889 3.8e-273 945.3 800 63.1
Carub.0006s2087 Capsella rubella HOM05D000251 ORTHO05D007889 1.1e-272 943.7 801 62.9
AT5G23080 Arabidopsis thaliana HOM05D000251 ORTHO05D007889 8.0e-271 937.6 799 63.0
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 3.4e-269 932.2 801 62.5
PSO478G4362 Papaver somniferum HOM05D000251 ORTHO05D007889 1.2e-266 923.7 927 57.6
THA.LOC104819385 Tarenaya hassleriana HOM05D000251 ORTHO05D007889 2.3e-265 919.5 819 61.4
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 4.3e-264 915.2 743 65.7
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 9.5e-264 914.1 953 55.5
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 1.0e-262 910.6 813 61.9
Sp2g24040 Schrenkiella parvula HOM05D000251 ORTHO05D007889 1.0e-262 910.6 873 58.3
AUR62032169 Chenopodium quinoa HOM05D000251 ORTHO05D007889 2.3e-262 909.4 837 58.3
Migut.G01282 Erythranthe guttata HOM05D000251 ORTHO05D007889 6.8e-262 907.9 844 59.7
BraA03t13769Z Brassica rapa HOM05D000251 ORTHO05D007889 1.1e-259 900.6 875 58.1
A03p46430 Brassica napus HOM05D000251 ORTHO05D007889 2.4e-259 899.4 829 60.0
C07p44450 Brassica napus HOM05D000251 ORTHO05D007889 2.3e-257 892.9 879 57.5
BolC7t44966H Brassica oleracea HOM05D000251 ORTHO05D007889 2.3e-257 892.9 879 57.3
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 9.5e-256 887.5 696 66.7
BraA09t36355Z Brassica rapa HOM05D000251 ORTHO05D007889 1.2e-255 887.1 835 58.9
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 1.6e-255 886.7 742 63.9
Thhalv10003608m.g Eutrema salsugineum HOM05D000251 ORTHO05D007889 2.1e-255 886.3 828 59.2
BcaC04g23479 Brassica carinata HOM05D000251 ORTHO05D007889 6.2e-255 884.8 860 57.2
BolC9t53705H Brassica oleracea HOM05D000251 ORTHO05D007889 6.2e-255 884.8 860 57.2
Phvul.003G179400 Phaseolus vulgaris HOM05D000251 ORTHO05D007889 3.7e-252 875.5 813 57.9
C09p07920 Brassica napus HOM05D000251 ORTHO05D007889 4.9e-252 875.2 860 56.9
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 4.1e-251 872.1 861 57.0
BcaB04g19889 Brassica carinata HOM05D000251 ORTHO05D007889 1.6e-242 843.6 861 56.2
CDE08G0099 Ceratophyllum demersum HOM05D000251 ORTHO05D007889 1.1e-238 830.9 815 54.7
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 3.4e-237 825.9 804 57.5
SalBow2G1753 Salvia bowleyana HOM05D000251 ORTHO05D007889 7.3e-232 808.1 902 53.0
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 2.1e-226 790.0 816 54.9
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.3e-225 787.3 835 54.1
Os06g0489200 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D007889 8.1e-223 778.1 824 54.4
Nn039s41709 Nelumbo nucifera HOM05D000251 ORTHO05D007889 2.9e-172 610.1 507 63.3
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 6.7e-169 599.0 888 44.8
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 9.8e-160 568.5 864 42.5
SMO358G0348 Selaginella moellendorffii HOM05D000251 ORTHO05D007889 1.6e-154 551.2 852 42.7
HPP92_003115 Vanilla planifolia HOM05D000251 ORTHO05D007889 8.0e-146 522.3 671 47.7
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 4.9e-143 513.1 856 40.4
CARHR190450 Cardamine hirsuta HOM05D000251 ORTHO05D007889 1.7e-135 488.0 588 50.9
SEGI_18733 Sequoiadendron giganteum HOM05D000251 ORTHO05D007889 4.9e-127 459.9 441 54.9
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 8.9e-121 439.1 352 62.8
Hma1.2p1_0595F.1_g186100 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 9.0e-97 359.4 226 80.1
CBR_g57132 Chara braunii HOM05D000251 ORTHO05D007889 4.9e-95 353.6 1034 31.8
Zm00001eb382170 Zea mays HOM05D000251 ORTHO05D007889 1.6e-93 348.6 444 49.3
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 7.2e-62 243.4 729 30.6
Actinidia16061 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.4e-49 201.8 188 54.8
Psat4g067080 Pisum sativum HOM05D000251 ORTHO05D007889 1.8e-44 185.7 239 46.4
Cre13.g568700 Chlamydomonas reinhardtii HOM05D000251 ORTHO05D007889 8.8e-44 183.3 345 36.2
SHI18972 Sapria himalayana HOM05D000251 ORTHO05D007889 9.8e-43 179.9 107 79.4
Ah.02g114430 Amaranthus hybridus HOM05D000169 ORTHO05D000542 5.4e-41 174.1 106 79.2
BcaC06g33188 Brassica carinata HOM05D000251 ORTHO05D007889 9.1e-41 173.3 315 41.6
CiPaw.15G123400 Carya illinoinensis HOM05D000251 ORTHO05D007889 3.2e-33 148.3 91 82.4
Actinidia16060 Actinidia chinensis HOM05D000251 ORTHO05D007889 2.2e-26 125.6 161 46.6
Cfa026338 Carpinus fangiana HOM05D000251 ORTHO05D007889 1.1e-22 113.2 697 25.4
GSVIVG01008210001 Vitis vinifera HOM05D000251 ORTHO05D007889 1.6e-21 109.4 73 71.2
Rhsim08G0139300 Rhododendron simsii HOM05D000251 ORTHO05D007889 2.3e-20 105.5 182 40.7
Hma1.2p1_0690F.1_g203840 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 6.8e-12 77.4 46 78.3
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 6.4e-10 70.9 65 46.2
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 8.3e-10 70.5 102 38.2
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 1.4e-09 69.7 89 42.7
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 2.4e-09 68.9 89 41.6
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 3.2e-09 68.6 89 41.6
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 3.2e-09 68.6 88 40.9
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 9.2e-09 67.0 99 36.4
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 9.2e-09 67.0 103 35.0
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 9.2e-09 67.0 89 39.3
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 1.2e-08 66.6 98 39.8
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 1.6e-08 66.2 96 36.5
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.1e-08 65.9 95 37.9
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 2.7e-08 65.5 89 40.4
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 4.6e-08 64.7 97 36.1
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 6.0e-08 64.3 88 39.8
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 7.8e-08 63.9 89 39.3
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 7.8e-08 63.9 89 39.3
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 7.8e-08 63.9 70 48.6
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 1.7e-07 62.8 95 36.8
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 1.7e-07 62.8 95 36.8
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 1.7e-07 62.8 66 47.0
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 2.3e-07 62.4 64 42.2
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 2.3e-07 62.4 89 38.2
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 3.0e-07 62.0 89 38.2
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 3.9e-07 61.6 98 36.7
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 5.1e-07 61.2 89 38.2
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 5.1e-07 61.2 81 39.5
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 5.1e-07 61.2 78 43.6
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 6.6e-07 60.8 56 50.0
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 6.6e-07 60.8 56 50.0
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 8.6e-07 60.5 64 45.3
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 8.6e-07 60.5 89 38.2
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 8.6e-07 60.5 89 38.2
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 8.6e-07 60.5 64 43.8
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 1.1e-06 60.1 89 36.0
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.1e-06 60.1 56 48.2
A09p45180 Brassica napus HOM05D004785 ORTHO05D005704 1.5e-06 59.7 221 29.0
C08p27390 Brassica napus HOM05D004785 ORTHO05D005704 1.5e-06 59.7 233 28.8
BolC8t50356H Brassica oleracea HOM05D004785 ORTHO05D005704 1.5e-06 59.7 233 28.8
BraA09t39981Z Brassica rapa HOM05D004785 ORTHO05D005704 1.5e-06 59.7 221 29.0
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 1.5e-06 59.7 89 37.1
HPP92_003096 Vanilla planifolia HOM05D000251 ORTHO05D007889 1.5e-06 59.7 128 37.5
BcaNung06094 Brassica carinata HOM05D004785 ORTHO05D005704 1.9e-06 59.3 221 29.0
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 1.9e-06 59.3 73 37.0
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.9e-06 59.3 89 37.1
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 1.9e-06 59.3 83 38.6
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 3.3e-06 58.5 73 37.0
Lsat_1_v5_gn_4_21520 Lactuca sativa HOM05D003221 ORTHO05D016847 3.3e-06 58.5 66 51.5
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 3.3e-06 58.5 89 37.1
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 3.3e-06 58.5 95 34.7
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 4.3e-06 58.2 56 46.4
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 4.3e-06 58.2 64 42.2
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 4.3e-06 58.2 56 46.4
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 4.3e-06 58.2 58 43.1
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 5.6e-06 57.8 76 40.8
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.6e-06 57.8 64 43.8
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 7.3e-06 57.4 50 50.0
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 7.3e-06 57.4 65 40.0
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 7.3e-06 57.4 53 47.2
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 9.6e-06 57.0 66 42.4
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 9.6e-06 57.0 65 40.0


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