Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD13G1154800 Malus domestica HOM05D006900 ORTHO05D008651 3.8e-202 708.8 630 100.0
Prupe.1G117800 Prunus persica HOM05D006900 ORTHO05D008651 2.3e-154 550.1 639 87.6
RcHm_v2.0_Chr4g0425111 Rosa chinensis HOM05D006900 ORTHO05D008651 1.2e-123 448.0 630 82.1
FAN07G1219 Fragaria x ananassa HOM05D006900 ORTHO05D008651 1.7e-120 437.6 630 80.5
FvH4_4g19660 Fragaria vesca HOM05D006900 ORTHO05D008651 2.4e-119 433.7 629 80.1
FAN12G3178 Fragaria x ananassa HOM05D006900 ORTHO05D008651 4.2e-116 422.9 629 79.3
GSVIVG01034997001 Vitis vinifera HOM05D006900 ORTHO05D008651 1.2e-110 404.8 632 77.4
Haze_01304 Corylus avellana HOM05D006900 ORTHO05D008651 6.1e-107 392.5 640 76.2
Cfa015319 Carpinus fangiana HOM05D006900 ORTHO05D008651 6.7e-106 389.0 624 76.6
QL06p012004 Quercus lobata HOM05D006900 ORTHO05D008651 6.7e-106 389.0 647 74.8
arahy.Tifrunner.gnm1.ann1.Z0RY6M Arachis hypogaea HOM05D006900 ORTHO05D008651 9.1e-103 378.6 633 76.0
TAR362G0296 Trochodendron aralioides HOM05D006900 ORTHO05D008651 5.9e-102 375.9 639 75.6
arahy.Tifrunner.gnm1.ann1.88EKIY Arachis hypogaea HOM05D006900 ORTHO05D008651 1.7e-101 374.4 632 75.3
Hma1.2p1_0013F.1_g008570 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 1.7e-101 374.4 643 74.5
Lj4g0008712 Lotus japonicus HOM05D006900 ORTHO05D008651 1.5e-100 371.3 628 75.2
Thecc.04G300100 Theobroma cacao HOM05D006900 ORTHO05D008651 6.1e-99 365.9 642 74.1
Duzib212G0988 Durio zibethinus HOM05D006900 ORTHO05D008651 1.0e-98 365.2 638 73.8
TWI09G0824 Tripterygium wilfordii HOM05D006900 ORTHO05D008651 4.0e-98 363.2 629 75.4
CSS0034541 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 8.8e-98 362.1 641 73.8
CANSAT64G2951 Cannabis sativa HOM05D006900 ORTHO05D008651 8.8e-98 362.1 644 74.2
ClCG05G006560 Citrullus lanatus HOM05D006900 ORTHO05D008651 2.8e-96 357.1 626 73.5
Potri.010G145000 Populus trichocarpa HOM05D006900 ORTHO05D008651 6.3e-96 355.9 648 71.9
CiPaw.02G075100 Carya illinoinensis HOM05D006900 ORTHO05D008651 4.1e-95 353.2 635 73.1
PGR004G2297 Punica granatum HOM05D006900 ORTHO05D008651 5.4e-95 352.8 638 74.0
CsaV3_3G015170 Cucumis sativus L. HOM05D006900 ORTHO05D008651 9.1e-95 352.1 624 74.5
Lalb_Chr07g0182071 Lupinus albus HOM05D006900 ORTHO05D008651 9.1e-95 352.1 628 73.1
Glyma.07G240000 Glycine max HOM05D006900 ORTHO05D008651 2.7e-94 350.5 639 71.7
Atru.chr4.3007 Acer truncatum HOM05D006900 ORTHO05D008651 3.5e-94 350.1 635 74.2
MELO3C006715.2 Cucumis melo HOM05D006900 ORTHO05D008651 1.0e-93 348.6 624 73.7
Gorai.011G199800 Gossypium raimondii HOM05D006900 ORTHO05D008651 1.0e-93 348.6 646 72.9
Medtr4g122060 Medicago truncatula HOM05D006900 ORTHO05D008651 1.0e-93 348.6 634 71.3
Nn3g21725 Nelumbo nucifera HOM05D006900 ORTHO05D008651 2.9e-93 347.1 657 72.9
Actinidia13360 Actinidia chinensis HOM05D006900 ORTHO05D008651 8.5e-93 345.5 637 73.3
Gohir.D10G178700 Gossypium hirsutum HOM05D006900 ORTHO05D008651 1.5e-92 344.7 646 72.8
Ciclev10004521m.g Citrus clementina HOM05D006900 ORTHO05D008651 2.5e-92 344.0 628 73.9
Gohir.A10G171600 Gossypium hirsutum HOM05D006900 ORTHO05D008651 2.5e-92 344.0 639 72.9
Sabra10G0112000 Salix brachista HOM05D006900 ORTHO05D008651 9.5e-92 342.0 650 71.2
CAN.G274.12 Capsicum annuum HOM05D006900 ORTHO05D008651 1.2e-91 341.7 660 71.5
Solyc04g009020.4 Solanum lycopersicum HOM05D006900 ORTHO05D008651 1.2e-91 341.7 658 71.0
Glyma.17G033400 Glycine max HOM05D006900 ORTHO05D008651 2.1e-91 340.9 641 70.8
Sopen04g004200 Solanum pennellii HOM05D006900 ORTHO05D008651 3.6e-91 340.1 659 70.6
Manes.03G204600 Manihot esculenta HOM05D006900 ORTHO05D008651 8.0e-91 339.0 648 70.8
Peaxi162Scf00681g00223 Petunia axillaris HOM05D006900 ORTHO05D008651 8.0e-91 339.0 653 71.7
Lj6A690T75 Lonicera japonica HOM05D006900 ORTHO05D008651 5.2e-90 336.3 639 72.6
PGSC0003DMG400011531 Solanum tuberosum HOM05D006900 ORTHO05D008651 5.2e-90 336.3 658 70.4
Dinv15174 Davidia involucrata HOM05D006900 ORTHO05D008651 1.2e-89 335.1 546 79.5
VMungo1215G0487 Vigna mungo HOM05D006900 ORTHO05D008651 1.5e-89 334.7 631 70.7
COL.COLO4_34620 Corchorus olitorius HOM05D006900 ORTHO05D008651 5.7e-89 332.8 607 74.8
Eucgr.H04042 Eucalyptus grandis HOM05D006900 ORTHO05D008651 6.3e-88 329.3 569 68.0
Cc03_g00870 Coffea canephora HOM05D006900 ORTHO05D008651 4.5e-86 323.2 650 70.8
Thhalv10020271m.g Eutrema salsugineum HOM05D006900 ORTHO05D008651 1.0e-85 322.0 633 71.1
Nitab4.5_0004979g0030 Nicotiana tabacum HOM05D006900 ORTHO05D008651 1.7e-85 321.2 668 69.5
Nitab4.5_0010299g0060 Nicotiana tabacum HOM05D006900 ORTHO05D008651 3.8e-85 320.1 696 53.7
Carub.0003s1679 Capsella rubella HOM05D006900 ORTHO05D008651 5.0e-85 319.7 643 70.9
THA.LOC104820304 Tarenaya hassleriana HOM05D006900 ORTHO05D008651 1.2e-83 315.1 626 72.4
Rhsim02G0004000 Rhododendron simsii HOM05D006900 ORTHO05D008651 2.1e-83 314.3 689 45.7
CARHR092290 Cardamine hirsuta HOM05D006900 ORTHO05D008651 2.8e-83 313.9 644 69.6
MBI18_g32026_MAGBIO Magnolia biondii HOM05D006900 ORTHO05D008651 2.8e-83 313.9 522 81.2
C05p49400 Brassica napus HOM05D006900 ORTHO05D008651 3.6e-83 313.5 625 70.6
BraA05t22092Z Brassica rapa HOM05D006900 ORTHO05D008651 3.6e-83 313.5 629 70.3
Migut.G00056 Erythranthe guttata HOM05D006900 ORTHO05D008651 3.6e-83 313.5 631 71.9
A05p32690 Brassica napus HOM05D006900 ORTHO05D008651 8.0e-83 312.4 637 70.0
Aa31LG8G4070 Aethionema arabicum HOM05D006900 ORTHO05D008651 1.0e-82 312.0 639 69.3
MSTRG.10150 Avicennia marina HOM05D006900 ORTHO05D008651 1.0e-82 312.0 595 74.5
BcaB06g25797 Brassica carinata HOM05D006900 ORTHO05D008651 1.4e-82 311.6 629 70.4
Aqoxy5G02843 Aquilegia oxysepala HOM05D006900 ORTHO05D008651 2.3e-82 310.8 525 80.0
Sp3g15260 Schrenkiella parvula HOM05D006900 ORTHO05D008651 2.3e-82 310.8 641 69.7
Psat0s740g0280 Pisum sativum HOM05D006900 ORTHO05D008651 4.0e-82 310.1 578 72.5
SGA_v2.0_scaffold104G30080 Striga asiatica HOM05D006900 ORTHO05D008651 5.2e-82 309.7 630 71.3
AUR62016204 Chenopodium quinoa HOM05D006900 ORTHO05D008651 2.0e-81 307.8 511 82.2
PSO357G0537 Papaver somniferum HOM05D006900 ORTHO05D008651 2.6e-81 307.4 676 67.2
AUR62039284 Chenopodium quinoa HOM05D006900 ORTHO05D008651 3.4e-81 307.0 511 82.2
unitig_748.g8700 Utricularia gibba HOM05D006900 ORTHO05D008651 7.5e-81 305.8 639 69.5
BcaC05g28835 Brassica carinata HOM05D006900 ORTHO05D008651 9.8e-81 305.4 638 69.6
BolC5t33686H Brassica oleracea HOM05D006900 ORTHO05D008651 9.8e-81 305.4 638 69.6
AL3G30020 Arabidopsis lyrata HOM05D006900 ORTHO05D008651 6.4e-80 302.8 644 68.3
vmacro15184 Vaccinium macrocarpon HOM05D006900 ORTHO05D008651 6.4e-80 302.8 648 70.1
HanXRQChr13g0393421 Helianthus annuus HOM05D006900 ORTHO05D008651 8.3e-80 302.4 624 71.0
TPR.G16830 Trifolium pratense HOM05D006900 ORTHO05D008651 1.1e-79 302.0 647 56.9
PSO170G0176 Papaver somniferum HOM05D006900 ORTHO05D008651 4.1e-79 300.1 674 66.6
Ah.04g156910 Amaranthus hybridus HOM05D006900 ORTHO05D008651 7.0e-79 299.3 637 69.5
CDE12G0762 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 7.0e-79 299.3 626 69.0
Lsat_1_v5_gn_6_18120 Lactuca sativa HOM05D006900 ORTHO05D008651 1.3e-77 295.0 634 70.0
Phvul.003G114100 Phaseolus vulgaris HOM05D006900 ORTHO05D008651 3.3e-76 290.4 626 69.2
ECA233G1261 Erigeron canadensis HOM05D006900 ORTHO05D008651 5.6e-76 289.7 625 71.0
Sc15g0003210 Simmondsia chinensis HOM05D006900 ORTHO05D008651 1.6e-75 288.1 539 77.0
Sed0008833 Sechium edule HOM05D006900 ORTHO05D008651 3.6e-75 287.0 585 73.5
EL10Ac3g05503 Beta vulgaris HOM05D006900 ORTHO05D008651 2.0e-73 281.2 534 40.8
Zm00001eb014810 Zea mays HOM05D006900 ORTHO05D008651 1.7e-72 278.1 522 77.6
ATR0693G010 Amborella trichopoda HOM05D006900 ORTHO05D008651 3.7e-72 276.9 615 69.8
Ca_21442_v3 Cicer arietinum L. HOM05D006900 ORTHO05D008651 2.3e-69 267.7 257 59.9
Hma1.2p1_0013F.1_g008580 Hydrangea macrophylla HOM05D006900 ORTHO05D008651 4.6e-62 243.4 491 74.5
DCAR_030472 Daucus carota HOM05D006900 ORTHO05D008651 1.0e-61 242.3 624 61.4
Hund03124 Selenicereus undatus HOM05D006900 ORTHO05D008651 1.1e-60 238.8 732 56.3
SalBow8G4068 Salvia bowleyana HOM05D006900 ORTHO05D008651 1.5e-60 238.4 213 62.9
CDE01G0483 Ceratophyllum demersum HOM05D006900 ORTHO05D008651 1.2e-59 235.3 251 54.2
AT3G17040 Arabidopsis thaliana HOM05D006900 ORTHO05D008651 3.4e-57 227.3 263 52.5
Os03g0308800 Oryza sativa ssp. japonica HOM05D006900 ORTHO05D008651 1.3e-48 198.7 155 62.6
SEGI_12330 Sequoiadendron giganteum HOM05D006900 ORTHO05D008651 6.0e-46 189.9 471 76.0
CANSAT78G0722 Cannabis sativa HOM05D006900 ORTHO05D008651 3.9e-45 187.2 247 47.4
Mapoly0078s0010 Marchantia polymorpha HOM05D006900 ORTHO05D008651 8.1e-35 152.9 122 60.7
Cpa.g.sc9.62 Carica papaya HOM05D006900 ORTHO05D008651 1.1e-34 152.5 169 65.1
AagrBONN_evm.TU.Sc2ySwM_368.516 Anthoceros agrestis HOM05D006900 ORTHO05D008651 6.9e-34 149.8 192 47.4
SMO115G0152 Selaginella moellendorffii HOM05D006900 ORTHO05D008651 3.5e-30 137.5 110 61.8
CBR_g12177 Chara braunii HOM05D006900 ORTHO05D008651 1.9e-28 131.7 149 46.3
Pp3c1_20310 Physcomitrium patens HOM05D006900 ORTHO05D008651 2.5e-28 131.3 506 67.4
Cpa.g.sc9.61 Carica papaya HOM05D006900 ORTHO05D008651 4.3e-28 130.6 177 52.0
CSS0028196 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 2.8e-27 127.9 80 80.0
Gohir.A10G171900 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.7e-27 127.5 178 46.6
Gohir.A10G171950 Gossypium hirsutum HOM05D006900 ORTHO05D008651 3.7e-27 127.5 93 67.7
CSS0035140 Camellia sinensis var. sinensis HOM05D006900 ORTHO05D008651 3.1e-26 124.4 80 77.5
Cre09.g416200 Chlamydomonas reinhardtii HOM05D006900 ORTHO05D008651 1.8e-18 98.6 162 38.9
MCO01G208 Micromonas commoda HOM05D006900 ORTHO05D008651 5.0e-16 90.5 121 38.8
Oeu032012.1 Olea europaea HOM05D006900 ORTHO05D008651 1.6e-14 85.5 95 54.7
SGA_v2.0_scaffold157G37400 Striga asiatica HOM05D006900 ORTHO05D008651 1.3e-13 82.4 249 34.1
Oeu032144.1 Olea europaea HOM05D006900 ORTHO05D008651 2.5e-12 78.2 74 89.2
PRCOL_00006040 Prasinoderma coloniale HOM05D001216 ORTHO05D005688 6.3e-11 73.6 112 36.6


User provided reference genes

Program Settings