Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 2.7e-209 731.9 398 100.0
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-166 589.0 395 80.0
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.8e-166 589.0 395 80.0
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 1.4e-165 586.6 395 79.7
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 3.1e-165 585.5 395 79.7
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 8.4e-163 577.4 395 78.7
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 3.0e-160 568.9 395 78.0
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.9e-154 549.7 411 74.5
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 1.3e-150 537.0 399 74.2
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 1.0e-147 527.3 403 73.9
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.1e-145 519.6 396 73.5
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 2.7e-145 519.2 386 72.5
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 1.4e-144 516.9 397 71.8
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.0e-143 513.1 394 70.8
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 2.2e-142 509.6 398 72.4
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.7e-142 508.8 380 73.9
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 4.8e-142 508.4 379 73.9
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 4.8e-142 508.4 395 70.1
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 1.8e-141 506.5 381 74.0
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 7.0e-141 504.6 396 70.2
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.5e-140 503.4 399 71.4
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 3.5e-140 502.3 408 68.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 5.9e-140 501.5 397 68.0
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.7e-139 500.0 390 70.5
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 2.2e-139 499.6 402 67.7
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 6.5e-139 498.0 405 67.7
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.1e-138 497.3 386 69.7
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 7.2e-138 494.6 405 66.4
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 3.6e-137 492.3 407 69.0
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 4.7e-137 491.9 405 69.1
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 4.7e-137 491.9 399 70.4
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 6.1e-137 491.5 408 69.4
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 1.0e-136 490.7 397 67.3
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.8e-136 490.0 401 69.6
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 5.2e-136 488.4 375 72.5
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 1.5e-135 486.9 406 64.8
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.6e-135 486.1 391 70.6
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 5.7e-135 485.0 386 71.2
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 9.7e-135 484.2 278 89.2
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 2.2e-134 483.0 400 69.0
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 3.7e-134 482.3 403 69.0
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 3.1e-133 479.2 393 69.5
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 4.1e-133 478.8 388 68.8
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.6e-132 476.1 392 65.3
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 2.6e-132 476.1 397 70.3
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 4.5e-132 475.3 389 68.9
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 5.9e-132 474.9 380 66.8
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 5.9e-132 474.9 380 66.8
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 1.0e-131 474.2 392 67.9
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 1.0e-131 474.2 392 67.9
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 2.2e-131 473.0 437 62.5
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 5.0e-131 471.9 376 68.9
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 5.0e-131 471.9 388 65.7
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 8.5e-131 471.1 383 69.7
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.1e-130 470.7 460 60.4
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.9e-130 469.9 380 66.3
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 1.9e-130 469.9 386 67.6
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 1.9e-130 469.9 388 67.3
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 3.2e-130 469.2 407 65.4
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 4.2e-130 468.8 387 66.9
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 2.7e-129 466.1 390 66.2
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 6.1e-129 464.9 395 66.1
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 8.8e-128 461.1 396 63.9
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.6e-127 459.5 390 67.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 2.8e-126 456.1 401 62.6
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.1e-125 454.1 385 63.9
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 2.4e-125 453.0 397 64.5
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 7.0e-125 451.4 388 62.4
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.0e-124 449.9 388 65.5
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 3.5e-124 449.1 379 65.7
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 7.7e-124 448.0 324 73.1
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 3.8e-123 445.7 385 66.0
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 6.5e-123 444.9 378 62.2
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.9e-122 443.4 395 63.8
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 1.9e-122 443.4 406 63.1
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.2e-121 440.7 389 67.6
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.6e-121 440.3 380 63.4
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 1.4e-120 437.2 381 66.7
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 7.5e-119 431.4 291 80.1
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 1.6e-116 423.7 403 64.0
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 5.0e-115 418.7 298 71.1
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.9e-114 416.8 296 71.3
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 2.5e-114 416.4 258 81.8
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 9.5e-114 414.5 398 59.0
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.4e-112 410.6 304 72.7
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 2.3e-112 409.8 340 63.2
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 6.3e-110 401.7 307 69.7
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 6.3e-110 401.7 392 60.5
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 1.4e-109 400.6 301 70.1
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.2e-108 397.5 413 54.5
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 1.6e-108 397.1 396 58.3
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.5e-108 396.0 294 69.0
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 3.5e-108 396.0 281 75.4
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 3.2e-101 372.9 286 66.1
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 2.0e-100 370.2 280 73.9
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 3.1e-96 356.3 410 56.6
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 1.6e-92 344.0 211 79.1
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 3.5e-92 342.8 414 49.0
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 1.9e-90 337.0 248 71.4
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 1.8e-88 330.5 421 52.3
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 2.3e-88 330.1 403 51.9
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 5.8e-87 325.5 245 71.0
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 4.9e-86 322.4 303 57.8
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 4.9e-86 322.4 324 57.1
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 1.4e-85 320.9 252 67.9
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.0e-83 314.7 394 50.0
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 1.6e-81 307.4 196 80.1
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 2.9e-70 270.0 165 80.0
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.2e-68 264.6 212 67.9
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 1.3e-62 244.6 272 51.1
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.4e-61 240.4 254 55.5
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 7.1e-61 238.8 214 56.1
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.7e-60 236.9 299 50.8
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 5.7e-42 176.0 198 44.9
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 2.8e-41 173.7 252 39.7
TPR.G7405 Trifolium pratense HOM05D006305 ORTHO05D007984 1.3e-33 148.3 162 52.5
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.2e-31 141.7 194 38.1
SalBow6G3462 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.0e-30 138.7 144 55.6
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 2.2e-22 110.9 83 72.3
Pp3c16_18520 Physcomitrium patens HOM05D006305 ORTHO05D007984 9.4e-13 79.0 163 33.7
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.7e-09 68.2 131 38.9
Cpa.g.sc48.16 Carica papaya HOM05D006305 ORTHO05D007984 2.4e-08 64.3 89 46.1
MELO3C033326.2 Cucumis melo HOM05D006305 ORTHO05D168382 9.1e-08 62.4 84 46.4


User provided reference genes

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