Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 7.6e-61 237.7 132 100.0
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 2.2e-36 156.4 129 61.2
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 2.9e-36 156.0 94 72.3
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 6.5e-36 154.8 94 71.3
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 6.5e-36 154.8 94 71.3
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 8.5e-36 154.5 136 65.4
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 8.5e-36 154.5 94 72.3
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.1e-35 154.1 94 71.3
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 1.5e-35 153.7 94 71.3
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 1.5e-35 153.7 94 71.3
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 1.5e-35 153.7 107 65.4
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 1.5e-35 153.7 94 71.3
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.9e-35 153.3 133 68.4
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 2.5e-35 152.9 104 64.4
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 2.5e-35 152.9 94 70.2
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 3.2e-35 152.5 94 70.2
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 4.2e-35 152.1 94 68.1
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 4.2e-35 152.1 94 69.1
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 4.2e-35 152.1 94 71.3
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 4.2e-35 152.1 94 71.3
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 4.2e-35 152.1 94 70.2
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 4.2e-35 152.1 107 64.5
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 5.5e-35 151.8 94 69.1
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 5.5e-35 151.8 94 70.2
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 5.5e-35 151.8 94 69.1
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 5.5e-35 151.8 104 65.4
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 5.5e-35 151.8 126 65.1
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 5.5e-35 151.8 94 69.1
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 5.5e-35 151.8 125 66.4
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 7.2e-35 151.4 94 69.1
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 7.2e-35 151.4 125 64.8
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 7.2e-35 151.4 94 68.1
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 7.2e-35 151.4 94 68.1
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 7.2e-35 151.4 94 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 9.4e-35 151.0 108 62.0
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 9.4e-35 151.0 109 66.1
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 9.4e-35 151.0 94 69.1
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 1.2e-34 150.6 94 69.1
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 1.2e-34 150.6 94 69.1
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 1.2e-34 150.6 94 71.3
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 1.2e-34 150.6 94 69.1
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 1.2e-34 150.6 128 67.2
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 1.2e-34 150.6 110 64.5
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.6e-34 150.2 94 68.1
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.6e-34 150.2 94 68.1
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 1.6e-34 150.2 94 69.1
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 1.6e-34 150.2 94 68.1
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 69.1
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 68.1
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 68.1
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 68.1
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 2.1e-34 149.8 128 67.2
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 2.1e-34 149.8 128 67.2
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 68.1
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 2.1e-34 149.8 94 70.2
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 2.7e-34 149.4 129 69.8
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 2.7e-34 149.4 147 62.6
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 2.7e-34 149.4 125 67.2
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 2.7e-34 149.4 141 63.8
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 2.7e-34 149.4 132 68.2
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 3.6e-34 149.1 95 70.5
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 3.6e-34 149.1 94 68.1
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.6e-34 149.1 126 70.6
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.7e-34 148.7 103 64.1
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 4.7e-34 148.7 129 59.7
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 4.7e-34 148.7 94 68.1
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.7e-34 148.7 94 69.1
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.7e-34 148.7 94 69.1
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 4.7e-34 148.7 94 69.1
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 4.7e-34 148.7 131 67.2
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 6.1e-34 148.3 124 58.9
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 6.1e-34 148.3 124 58.9
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 6.1e-34 148.3 124 58.9
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 6.1e-34 148.3 107 64.5
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 6.1e-34 148.3 94 68.1
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 6.1e-34 148.3 108 61.1
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 8.0e-34 147.9 107 64.5
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 8.0e-34 147.9 128 68.8
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 8.0e-34 147.9 94 67.0
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 8.0e-34 147.9 107 64.5
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 8.0e-34 147.9 125 65.6
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 8.0e-34 147.9 141 64.5
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 8.0e-34 147.9 94 69.1
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 8.0e-34 147.9 94 69.1
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 1.0e-33 147.5 107 63.6
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.0e-33 147.5 134 64.2
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.0e-33 147.5 127 64.6
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 1.0e-33 147.5 126 69.0
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 1.0e-33 147.5 107 63.6
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.4e-33 147.1 136 64.7
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.4e-33 147.1 107 64.5
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.4e-33 147.1 138 64.5
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 1.4e-33 147.1 94 68.1
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 1.4e-33 147.1 94 68.1
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 1.4e-33 147.1 138 63.0
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 1.4e-33 147.1 138 63.0
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 1.4e-33 147.1 138 65.9
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.8e-33 146.7 127 68.5
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 2.3e-33 146.4 94 66.0
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 2.3e-33 146.4 127 68.5
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 2.3e-33 146.4 155 61.3
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 3.0e-33 146.0 132 68.2
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 3.0e-33 146.0 138 55.8
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 3.0e-33 146.0 134 67.9
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 4.0e-33 145.6 139 63.3
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 4.0e-33 145.6 94 66.0
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 4.0e-33 145.6 127 63.8
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 4.0e-33 145.6 127 60.6
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.0e-33 145.6 94 67.0
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 4.0e-33 145.6 94 67.0
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 4.0e-33 145.6 149 62.4
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 5.2e-33 145.2 91 70.3
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 5.2e-33 145.2 130 65.4
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 6.7e-33 144.8 94 67.0
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 6.7e-33 144.8 147 57.1
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 8.8e-33 144.4 138 63.0
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 8.8e-33 144.4 134 63.4
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 8.8e-33 144.4 124 62.9
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 1.2e-32 144.1 126 63.5
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 1.2e-32 144.1 126 63.5
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.2e-32 144.1 94 66.0
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 1.2e-32 144.1 127 66.1
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 1.5e-32 143.7 132 63.6
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 2.6e-32 142.9 142 61.3
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 2.6e-32 142.9 91 69.2
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 3.3e-32 142.5 125 67.2
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 4.4e-32 142.1 135 63.7
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 4.4e-32 142.1 133 61.7
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 4.4e-32 142.1 134 58.2
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 5.7e-32 141.7 134 64.9
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 5.7e-32 141.7 153 53.6
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 7.5e-32 141.4 138 62.3
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 7.5e-32 141.4 138 62.3
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 7.5e-32 141.4 138 62.3
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 7.5e-32 141.4 129 65.9
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 1.3e-31 140.6 150 56.7
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 2.8e-31 139.4 133 65.4
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 2.8e-31 139.4 85 70.6
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 3.7e-31 139.0 142 60.6
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 3.7e-31 139.0 136 63.2
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 6.3e-31 138.3 85 70.6
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 1.1e-30 137.5 85 70.6
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 2.4e-30 136.3 123 55.3
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.2e-29 134.0 93 64.5
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 1.6e-29 133.7 80 71.2
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 2.0e-29 133.3 85 67.1
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 4.5e-29 132.1 79 72.2
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 3.8e-28 129.0 80 70.0
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 8.5e-28 127.9 76 75.0
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 2.5e-27 126.3 125 60.0
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 5.5e-27 125.2 103 58.3
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.8e-25 120.2 125 59.2
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 2.2e-23 113.2 85 55.3
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 7.0e-22 108.2 121 46.3
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 2.3e-20 103.2 92 57.6
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 1.5e-19 100.5 91 49.5
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 4.7e-18 95.5 94 50.0
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 1.5e-16 90.5 91 47.3
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 2.0e-16 90.1 52 76.9
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 4.1e-14 82.4 51 72.5
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 1.3e-12 77.4 87 50.6
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 2.3e-12 76.6 87 50.6
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 2.1e-10 70.1 125 44.0
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 7.0e-06 55.1 76 48.7
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 7.0e-06 55.1 76 48.7
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 7.0e-06 55.1 76 46.1


User provided reference genes

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