Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G002 Micromonas commoda HOM05D003639 ORTHO05D004246 2.5e-187 659.1 446 100.0
CBR_g723 Chara braunii HOM05D003639 ORTHO05D004246 1.7e-58 231.1 298 47.7
Pp3c9_11970 Physcomitrium patens HOM05D003639 ORTHO05D004246 9.4e-54 215.3 303 45.2
AagrBONN_evm.TU.Sc2ySwM_117.1154 Anthoceros agrestis HOM05D003639 ORTHO05D004246 1.6e-53 214.5 305 42.3
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 1.2e-48 198.4 297 42.8
Haze_19749 Corylus avellana HOM05D003639 ORTHO05D004246 7.7e-48 195.7 296 40.9
Mapoly0061s0123 Marchantia polymorpha HOM05D003639 ORTHO05D004246 9.5e-46 188.7 463 50.8
Mapoly0014s0154 Marchantia polymorpha HOM05D003639 ORTHO05D004246 7.5e-43 179.1 283 39.9
Medtr5g022690 Medicago truncatula HOM05D003639 ORTHO05D004246 2.4e-41 174.1 297 40.1
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 7.0e-41 172.6 296 42.2
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 3.9e-39 166.8 451 49.4
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 1.5e-38 164.9 456 50.7
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 1.5e-38 164.9 456 50.7
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 1.9e-38 164.5 435 51.3
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 1.9e-38 164.5 435 51.0
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 2.5e-38 164.1 435 51.0
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 3.3e-38 163.7 456 50.4
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 3.3e-38 163.7 456 50.4
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 3.3e-38 163.7 456 47.6
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 1.6e-37 161.4 451 51.0
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 1.4e-36 158.3 451 50.3
MELO3C026433.2 Cucumis melo HOM05D003639 ORTHO05D004246 1.8e-36 157.9 454 48.7
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 3.1e-36 157.1 450 50.4
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 1.2e-35 155.2 452 49.3
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 2.0e-35 154.5 450 49.8
ClCG08G008940 Citrullus lanatus HOM05D003639 ORTHO05D004246 2.0e-35 154.5 454 48.2
CsaV3_6G036200 Cucumis sativus L. HOM05D003639 ORTHO05D004246 2.0e-35 154.5 454 48.5
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 2.6e-35 154.1 452 50.0
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 3.4e-35 153.7 456 49.8
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 4.4e-35 153.3 453 50.1
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 4.4e-35 153.3 453 50.1
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 5.8e-35 152.9 455 49.9
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 2.2e-34 151.0 451 49.7
CAN.G1237.4 Capsicum annuum HOM05D003639 ORTHO05D004246 2.2e-34 151.0 295 36.3
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 2.2e-34 151.0 454 46.3
Nn7g37752 Nelumbo nucifera HOM05D003639 ORTHO05D004246 4.9e-34 149.8 254 39.0
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 6.4e-34 149.4 452 46.2
ATR0665G145 Amborella trichopoda HOM05D003639 ORTHO05D004246 1.1e-33 148.7 244 38.1
TWI74G0834 Tripterygium wilfordii HOM05D003639 ORTHO05D004246 1.4e-33 148.3 456 47.8
Ah.13g076790 Amaranthus hybridus HOM05D003639 ORTHO05D004246 1.9e-33 147.9 452 34.1
SEGI_17823 Sequoiadendron giganteum HOM05D003639 ORTHO05D004246 4.1e-33 146.7 262 37.8
AUR62026120 Chenopodium quinoa HOM05D003639 ORTHO05D004246 7.0e-33 146.0 295 33.9
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 1.2e-32 145.2 435 49.0
Actinidia39194 Actinidia chinensis HOM05D003639 ORTHO05D004246 1.6e-32 144.8 295 34.6
Rhsim03G0032000 Rhododendron simsii HOM05D003639 ORTHO05D004246 1.6e-32 144.8 296 35.5
Oeu023136.1 Olea europaea HOM05D003639 ORTHO05D004246 2.0e-32 144.4 294 35.0
Hund19126 Selenicereus undatus HOM05D003639 ORTHO05D004246 2.0e-32 144.4 297 35.7
Cre16.g662800 Chlamydomonas reinhardtii HOM05D003639 ORTHO05D004246 3.5e-32 143.7 226 42.0
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 3.5e-32 143.7 436 47.5
MD12G1086300 Malus domestica HOM05D003639 ORTHO05D004246 3.5e-32 143.7 302 35.4
AUR62024528 Chenopodium quinoa HOM05D003639 ORTHO05D004246 4.6e-32 143.3 295 33.6
Migut.J01707 Erythranthe guttata HOM05D003639 ORTHO05D004246 6.0e-32 142.9 297 34.0
CSS0048368 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.7e-31 141.4 295 34.2
Nitab4.5_0001618g0260 Nicotiana tabacum HOM05D003639 ORTHO05D004246 1.7e-31 141.4 295 35.6
COL.COLO4_24957 Corchorus olitorius HOM05D003639 ORTHO05D004246 2.3e-31 141.0 453 46.6
Hma1.2p1_2162F.1_g315680 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 2.3e-31 141.0 256 38.7
Phvul.007G249600 Phaseolus vulgaris HOM05D003639 ORTHO05D004246 2.3e-31 141.0 295 36.3
Prupe.7G050300 Prunus persica HOM05D003639 ORTHO05D004246 3.0e-31 140.6 253 38.7
VMungo0720G2842 Vigna mungo HOM05D003639 ORTHO05D004246 3.0e-31 140.6 295 35.9
Os03g0355200 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 8.6e-31 139.0 299 35.1
Os03g0355400 Oryza sativa ssp. japonica HOM05D003639 ORTHO05D004246 8.6e-31 139.0 299 35.1
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 1.1e-30 138.7 438 47.9
Sc19g0008460 Simmondsia chinensis HOM05D003639 ORTHO05D004246 1.5e-30 138.3 252 38.9
CDE04G0356 Ceratophyllum demersum HOM05D003639 ORTHO05D004246 1.9e-30 137.9 253 37.2
Lalb_Chr21g0305241 Lupinus albus HOM05D003639 ORTHO05D004246 2.5e-30 137.5 297 35.7
MSTRG.6401 Avicennia marina HOM05D003639 ORTHO05D004246 3.3e-30 137.1 295 33.9
EL10Ac3g07157 Beta vulgaris HOM05D003639 ORTHO05D004246 3.3e-30 137.1 295 33.6
Ca_25791_v3 Cicer arietinum L. HOM05D003639 ORTHO05D004246 3.3e-30 137.1 297 35.4
QL07p005224 Quercus lobata HOM05D003639 ORTHO05D004246 3.3e-30 137.1 296 35.5
Dinv30299 Davidia involucrata HOM05D003639 ORTHO05D004246 4.3e-30 136.7 210 41.4
TPR.G10246 Trifolium pratense HOM05D003639 ORTHO05D004246 4.3e-30 136.7 298 34.9
Sed0002463 Sechium edule HOM05D003639 ORTHO05D004246 5.6e-30 136.3 206 43.2
SGA_v2.0_scaffold296G47577 Striga asiatica HOM05D003639 ORTHO05D004246 5.6e-30 136.3 295 33.6
arahy.Tifrunner.gnm1.ann1.6W6BYV Arachis hypogaea HOM05D003639 ORTHO05D004246 7.3e-30 136.0 296 35.1
DCAR_014011 Daucus carota HOM05D003639 ORTHO05D004246 7.3e-30 136.0 298 33.9
SalBow6G0945 Salvia bowleyana HOM05D003639 ORTHO05D004246 9.5e-30 135.6 257 36.2
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 1.2e-29 135.2 295 34.2
PGR004G0521 Punica granatum HOM05D003639 ORTHO05D004246 1.2e-29 135.2 456 42.8
arahy.Tifrunner.gnm1.ann1.Y8CJQK Arachis hypogaea HOM05D003639 ORTHO05D004246 1.6e-29 134.8 296 34.8
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 2.1e-29 134.4 447 48.3
Psat6g009840 Pisum sativum HOM05D003639 ORTHO05D004246 2.1e-29 134.4 297 35.0
TAR369G0628 Trochodendron aralioides HOM05D003639 ORTHO05D004246 2.1e-29 134.4 256 38.3
Nitab4.5_0000826g0140 Nicotiana tabacum HOM05D003639 ORTHO05D004246 2.8e-29 134.0 304 34.5
TPR.G1512 Trifolium pratense HOM05D003639 ORTHO05D004246 2.8e-29 134.0 298 34.9
Lsat_1_v5_gn_4_41600 Lactuca sativa HOM05D003639 ORTHO05D004246 3.6e-29 133.7 301 33.2
MBI13_g04793_MAGBIO Magnolia biondii HOM05D003639 ORTHO05D004246 4.7e-29 133.3 254 36.2
SGA_v2.0_scaffold69G23129 Striga asiatica HOM05D003639 ORTHO05D004246 4.7e-29 133.3 297 33.7
Duzib248G1450 Durio zibethinus HOM05D003639 ORTHO05D004246 6.2e-29 132.9 252 36.5
Manes.09G015900 Manihot esculenta HOM05D003639 ORTHO05D004246 6.2e-29 132.9 252 36.1
SMO356G0612 Selaginella moellendorffii HOM05D003639 ORTHO05D004246 8.1e-29 132.5 187 41.2
CANSAT80G2101 Cannabis sativa HOM05D003639 ORTHO05D004246 1.8e-28 131.3 203 39.9
Gohir.A12G015000 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.8e-28 131.3 208 38.0
Gohir.D12G015400 Gossypium hirsutum HOM05D003639 ORTHO05D004246 1.8e-28 131.3 208 38.0
Gorai.008G015500 Gossypium raimondii HOM05D003639 ORTHO05D004246 1.8e-28 131.3 208 38.0
Thecc.02G139000 Theobroma cacao HOM05D003639 ORTHO05D004246 1.8e-28 131.3 252 36.5
PSO832G3057 Papaver somniferum HOM05D003639 ORTHO05D004246 4.0e-28 130.2 247 38.5
Duzib132G0222 Durio zibethinus HOM05D003639 ORTHO05D004246 5.2e-28 129.8 252 35.3
Glyma.10G000800 Glycine max HOM05D003639 ORTHO05D004246 5.2e-28 129.8 295 34.9
Hma1.2p1_1333F.1_g276240 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 5.2e-28 129.8 253 35.2
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 6.8e-28 129.4 303 57.4
Aa31LG1G23520 Aethionema arabicum HOM05D003639 ORTHO05D004246 8.9e-28 129.0 295 34.9
Lj5g0008946 Lotus japonicus HOM05D003639 ORTHO05D004246 8.9e-28 129.0 294 34.0
Peaxi162Scf00177g10117 Petunia axillaris HOM05D003639 ORTHO05D004246 1.2e-27 128.6 254 36.2
CANSAT80G0359 Cannabis sativa HOM05D003639 ORTHO05D004246 1.5e-27 128.3 196 40.3
FAN09G0054 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.5e-27 128.3 251 35.5
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 1.5e-27 128.3 438 31.3
Glyma.02G190600 Glycine max HOM05D003639 ORTHO05D004246 2.0e-27 127.9 295 34.9
Aqoxy3G00063 Aquilegia oxysepala HOM05D003639 ORTHO05D004246 4.4e-27 126.7 253 37.2
ECA234G2577 Erigeron canadensis HOM05D003639 ORTHO05D004246 4.4e-27 126.7 295 32.5
FAN14G4828 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.4e-27 126.7 251 35.5
PSO063G3048 Papaver somniferum HOM05D003639 ORTHO05D004246 5.8e-27 126.3 247 38.1
FAN05G0107 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.7e-26 124.8 251 35.1
Ciclev10006458m.g Citrus clementina HOM05D003639 ORTHO05D004246 2.9e-26 124.0 251 35.9
FvH4_6g24750 Fragaria vesca HOM05D003639 ORTHO05D004246 2.9e-26 124.0 251 35.1
Zm00001eb017050 Zea mays HOM05D003639 ORTHO05D004246 6.4e-26 122.9 180 45.0
CiPaw.09G042100 Carya illinoinensis HOM05D003639 ORTHO05D004246 1.9e-25 121.3 296 33.1
RcHm_v2.0_Chr3g0484501 Rosa chinensis HOM05D003639 ORTHO05D004246 2.4e-25 120.9 164 39.6
Eucgr.A02297 Eucalyptus grandis HOM05D003639 ORTHO05D004246 3.2e-25 120.6 297 32.0
Potri.006G045800 Populus trichocarpa HOM05D003639 ORTHO05D004246 5.4e-25 119.8 256 35.2
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 7.1e-25 119.4 249 34.9
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 1.7e-23 114.8 321 31.8
Cfa024100 Carpinus fangiana HOM05D003639 ORTHO05D004246 2.3e-23 114.4 275 32.7
RcHm_v2.0_Chr3g0484331 Rosa chinensis HOM05D003639 ORTHO05D004246 3.0e-23 114.0 250 35.2
Lj4C34T1 Lonicera japonica HOM05D003639 ORTHO05D004246 1.6e-21 108.2 180 42.2
Atru.chr1.1191 Acer truncatum HOM05D003639 ORTHO05D004246 1.4e-20 105.1 165 43.0
BcaNung06794 Brassica carinata HOM05D003639 ORTHO05D004246 3.1e-20 104.0 292 32.5
GSVIVG01033551001 Vitis vinifera HOM05D003639 ORTHO05D004246 1.2e-19 102.1 234 31.2
TAR065G0005 Trochodendron aralioides HOM05D003639 ORTHO05D004246 5.8e-19 99.8 404 30.7
COL.COLO4_13929 Corchorus olitorius HOM05D003639 ORTHO05D004246 9.9e-19 99.0 198 53.5
MD14G1080500 Malus domestica HOM05D003639 ORTHO05D004246 2.9e-18 97.4 215 34.9
Cc06_g18350 Coffea canephora HOM05D003639 ORTHO05D004246 1.1e-17 95.5 207 32.9
VMungo0540G1675 Vigna mungo HOM05D003639 ORTHO05D004246 5.4e-17 93.2 213 32.9
BcaB06g29187 Brassica carinata HOM05D003639 ORTHO05D004246 3.3e-14 84.0 207 31.9
FAN10G2664 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-13 81.6 136 41.2
FAN14G5922 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-13 81.6 136 41.2
FAN17G3014 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.6e-13 81.6 136 41.2
FAN03G0195 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-13 81.3 136 41.2
FAN19G1783 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-13 81.3 136 41.2
FAN23G2202 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.1e-13 81.3 136 41.2
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 2.1e-13 81.3 268 28.7
FAN06G0994 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.8e-13 80.9 136 41.2
FAN09G4382 Fragaria x ananassa HOM05D003639 ORTHO05D004246 3.6e-13 80.5 134 40.3
FAN07G1748 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.7e-13 80.1 136 40.4
FAN22G1757 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.7e-13 80.1 136 41.2
FAN13G2401 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.2e-13 79.7 136 40.4
FAN16G0989 Fragaria x ananassa HOM05D003639 ORTHO05D004246 6.2e-13 79.7 132 40.9
Sed0000547 Sechium edule HOM05D003639 ORTHO05D004246 6.2e-13 79.7 150 36.7
FAN24G0290 Fragaria x ananassa HOM05D003639 ORTHO05D004246 8.1e-13 79.3 136 40.4
Sabra06G0031300 Salix brachista HOM05D003639 ORTHO05D004246 1.1e-12 79.0 256 28.9
FAN01G0512 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.4e-12 78.6 136 40.4
FAN28G1931 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.4e-12 78.6 136 40.4
BcaNung04072 Brassica carinata HOM05D003639 ORTHO05D004246 1.8e-12 78.2 181 34.8
Atru.chr6.1380 Acer truncatum HOM05D003639 ORTHO05D004246 5.2e-12 76.6 265 46.4
FAN27G3180 Fragaria x ananassa HOM05D003639 ORTHO05D004246 2.0e-11 74.7 136 39.7
BolC5t34692H Brassica oleracea HOM05D003639 ORTHO05D004246 3.4e-11 73.9 117 43.6
vmacro21947 Vaccinium macrocarpon HOM05D003639 ORTHO05D004246 1.3e-10 72.0 169 31.4
QL04p089213 Quercus lobata HOM05D003639 ORTHO05D004246 2.2e-10 71.2 114 39.5
MELO3C019779.2 Cucumis melo HOM05D003639 ORTHO05D004246 6.4e-10 69.7 399 33.1
FAN25G1774 Fragaria x ananassa HOM05D003639 ORTHO05D004246 1.4e-09 68.6 117 40.2
BcaC01g05332 Brassica carinata HOM05D003639 ORTHO05D004246 3.0e-07 60.8 60 45.0
C03p27810 Brassica napus HOM05D003639 ORTHO05D004246 3.0e-07 60.8 60 45.0
BolC3t15153H Brassica oleracea HOM05D003639 ORTHO05D004246 3.0e-07 60.8 60 45.0
Atru.chr6.1378 Acer truncatum HOM05D003639 ORTHO05D004246 1.1e-06 58.9 57 54.4
Medtr0012s0110 Medicago truncatula HOM05D003639 ORTHO05D004246 1.5e-06 58.5 73 50.7
FAN17G0086 Fragaria x ananassa HOM05D003639 ORTHO05D004246 4.3e-06 57.0 91 40.7
Atru.chr6.1379 Acer truncatum HOM05D003639 ORTHO05D004246 9.6e-06 55.8 74 44.6


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