Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO08G104 Micromonas commoda HOM05D004601 ORTHO05D005806 2.5e-172 608.6 291 100.0
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 4.4e-52 209.1 284 40.1
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 2.2e-51 206.8 290 39.3
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 2.9e-51 206.5 282 39.7
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 2.9e-51 206.5 279 39.1
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 4.9e-51 205.7 284 39.4
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 8.3e-51 204.9 282 39.7
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.4e-50 204.1 278 39.9
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.4e-50 204.1 278 38.8
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 1.4e-50 204.1 282 39.4
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 1.9e-50 203.8 278 38.5
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 1.9e-50 203.8 282 38.7
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 1.9e-50 203.8 278 39.6
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 1.9e-50 203.8 281 38.1
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.4e-50 203.4 284 38.7
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 2.4e-50 203.4 283 38.5
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 3.2e-50 203.0 294 39.1
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 4.1e-50 202.6 278 39.2
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 5.4e-50 202.2 278 39.2
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 5.4e-50 202.2 284 39.1
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 5.4e-50 202.2 278 38.5
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 9.2e-50 201.4 284 39.1
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 9.2e-50 201.4 284 38.7
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 1.2e-49 201.1 278 40.3
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 1.2e-49 201.1 296 38.2
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.6e-49 200.7 283 39.6
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 2.1e-49 200.3 280 38.9
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 2.1e-49 200.3 295 38.6
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 2.7e-49 199.9 279 38.0
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 2.7e-49 199.9 279 38.0
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 2.7e-49 199.9 280 38.6
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 2.7e-49 199.9 280 38.6
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.7e-49 199.9 286 37.4
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 4.6e-49 199.1 284 38.7
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 4.6e-49 199.1 278 38.8
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 6.0e-49 198.7 283 37.1
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 6.0e-49 198.7 278 38.1
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 6.0e-49 198.7 284 37.7
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 7.8e-49 198.4 284 39.4
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 7.8e-49 198.4 277 38.3
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 1.0e-48 198.0 283 37.1
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 1.0e-48 198.0 284 38.4
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 1.0e-48 198.0 278 37.4
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 1.7e-48 197.2 279 37.6
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 1.7e-48 197.2 279 38.0
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 1.7e-48 197.2 279 37.3
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 1.7e-48 197.2 279 37.6
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 2.3e-48 196.8 284 38.7
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 3.0e-48 196.4 280 37.9
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 3.0e-48 196.4 286 38.1
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 3.0e-48 196.4 282 37.2
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 3.0e-48 196.4 282 37.2
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 3.9e-48 196.1 278 37.8
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 3.9e-48 196.1 282 37.9
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 3.9e-48 196.1 278 38.8
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 5.1e-48 195.7 278 38.1
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 5.1e-48 195.7 280 38.6
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 6.6e-48 195.3 284 38.4
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 6.6e-48 195.3 279 37.3
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 6.6e-48 195.3 278 36.7
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 8.6e-48 194.9 279 38.4
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 1.5e-47 194.1 284 37.0
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.5e-47 194.1 283 38.2
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.5e-47 193.4 283 37.5
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 4.3e-47 192.6 283 37.1
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 5.6e-47 192.2 278 36.7
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 5.6e-47 192.2 282 37.2
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 7.3e-47 191.8 281 36.7
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 9.5e-47 191.4 267 39.7
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 2.1e-46 190.3 281 37.7
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 6.2e-46 188.7 296 36.1
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 1.4e-45 187.6 281 36.3
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 3.1e-45 186.4 283 38.2
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 4.0e-45 186.0 278 37.8
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 6.8e-45 185.3 279 37.3
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 6.8e-45 185.3 281 37.0
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 6.8e-45 185.3 281 37.0
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 2.0e-44 183.7 320 35.0
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 2.6e-44 183.3 304 34.9
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 9.9e-44 181.4 278 36.0
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 9.9e-44 181.4 278 37.4
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.4e-42 177.6 278 36.7
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.4e-42 176.8 261 39.1
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 7.1e-42 175.3 279 36.9
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 1.6e-41 174.1 236 41.5
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 1.7e-40 170.6 271 36.9
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 3.9e-40 169.5 281 35.2
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 5.1e-40 169.1 239 37.2
ECA236G0938 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.1e-38 163.7 195 40.0
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 1.7e-35 154.1 186 39.8
CARHR270950 Cardamine hirsuta HOM05D004601 ORTHO05D005806 3.2e-34 149.8 176 40.3
CsaV3_2G008760 Cucumis sativus L. HOM05D004601 ORTHO05D005806 4.3e-31 139.4 159 41.5
Cre10.g433550 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D005806 5.6e-31 139.0 345 28.4
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 2.8e-30 136.7 275 31.3
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 4.4e-28 129.4 316 32.9
CBR_g35050 Chara braunii HOM05D004601 ORTHO05D005806 5.8e-28 129.0 206 35.4
Glyma.09G060066 Glycine max HOM05D004601 ORTHO05D005806 3.8e-27 126.3 159 39.0
HPP92_021964 Vanilla planifolia HOM05D004601 ORTHO05D005806 6.4e-27 125.6 190 34.7
Cfa023642 Carpinus fangiana HOM05D004601 ORTHO05D005806 7.1e-26 122.1 303 28.4
BcaB08g35989 Brassica carinata HOM05D004601 ORTHO05D005806 2.3e-24 117.1 142 39.4
SEGI_06603 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 2.7e-17 93.6 145 31.7
SEGI_14441 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 1.8e-13 80.9 104 36.5
Cre06.g277801 Chlamydomonas reinhardtii HOM05D004601 ORTHO05D143102 1.3e-11 74.7 190 27.9
Sopen00g010200 Solanum pennellii HOM05D004601 ORTHO05D005806 1.6e-09 67.8 103 31.1
Nitab4.5_0006199g0030 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.1e-08 62.8 91 30.8
CBR_g50203 Chara braunii HOM05D004601 ORTHO05D005806 8.2e-06 55.5 72 36.1


User provided reference genes

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