Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO04G165 Micromonas commoda HOM05D001849 ORTHO05D004689 0.0e+00 2443.7 1313 100.0
CBR_g39720 Chara braunii HOM05D001849 ORTHO05D004689 1.1e-30 140.2 697 25.4
SMO304G0023 Selaginella moellendorffii HOM05D001849 ORTHO05D004689 1.6e-29 136.3 677 24.1
AagrBONN_evm.TU.Sc2ySwM_362.2383 Anthoceros agrestis HOM05D001849 ORTHO05D004689 5.3e-28 131.3 750 24.7
PRCOL_00005073 Prasinoderma coloniale HOM05D001849 ORTHO05D004689 1.0e-26 127.1 834 25.9
CiPaw.01G216000 Carya illinoinensis HOM05D001849 ORTHO05D004689 1.1e-22 113.6 693 25.0
Pp3c8_15880 Physcomitrium patens HOM05D001849 ORTHO05D004689 7.4e-22 110.9 466 26.2
Cre10.g425675 Chlamydomonas reinhardtii HOM05D001849 ORTHO05D004689 2.1e-21 109.4 415 28.0
ATR0681G401 Amborella trichopoda HOM05D001849 ORTHO05D004689 3.7e-21 108.6 764 24.3
Mapoly0024s0112 Marchantia polymorpha HOM05D001849 ORTHO05D004689 8.2e-21 107.5 447 27.1
PGR119G1999 Punica granatum HOM05D001849 ORTHO05D004689 8.2e-21 107.5 771 24.4
CANSAT56G0878 Cannabis sativa HOM05D001849 ORTHO05D004689 1.2e-19 103.6 690 24.6
Atru.chr2.1505 Acer truncatum HOM05D001849 ORTHO05D004689 2.6e-19 102.4 544 25.7
AUR62001443 Chenopodium quinoa HOM05D001849 ORTHO05D004689 2.6e-19 102.4 698 23.4
Prupe.3G037400 Prunus persica HOM05D001849 ORTHO05D004689 3.4e-19 102.1 698 24.6
Psat4g166880 Pisum sativum HOM05D001849 ORTHO05D004689 5.9e-19 101.3 691 25.5
Migut.D00924 Erythranthe guttata HOM05D001849 ORTHO05D004689 6.5e-18 97.8 721 25.0
Thecc.06G124800 Theobroma cacao HOM05D001849 ORTHO05D004689 2.5e-17 95.9 686 24.3
Lj3g0004011 Lotus japonicus HOM05D001849 ORTHO05D004689 3.2e-17 95.5 714 25.1
ClCG09G001140 Citrullus lanatus HOM05D001849 ORTHO05D004689 7.2e-17 94.4 706 23.2
Phvul.010G127100 Phaseolus vulgaris HOM05D001849 ORTHO05D004689 9.3e-17 94.0 696 24.6
COL.COLO4_30797 Corchorus olitorius HOM05D001849 ORTHO05D004689 2.7e-16 92.4 813 24.2
AUR62009922 Chenopodium quinoa HOM05D001849 ORTHO05D004689 1.3e-15 90.1 723 23.1
Lsat_1_v5_gn_4_91381 Lactuca sativa HOM05D001849 ORTHO05D004689 3.0e-15 89.0 801 23.2
Zm00001eb165950 Zea mays HOM05D001849 ORTHO05D004689 3.0e-15 89.0 733 23.5
EL10Ac7g16444 Beta vulgaris HOM05D001849 ORTHO05D004689 1.5e-14 86.7 591 24.4
HPP92_022009 Vanilla planifolia HOM05D001849 ORTHO05D004689 3.3e-14 85.5 279 27.2
Potri.001G165900 Populus trichocarpa HOM05D001849 ORTHO05D004689 1.3e-13 83.6 537 24.0
Aqoxy7G04006 Aquilegia oxysepala HOM05D001849 ORTHO05D004689 1.6e-13 83.2 453 25.2
arahy.Tifrunner.gnm1.ann1.1RN2YG Arachis hypogaea HOM05D001849 ORTHO05D004689 1.6e-13 83.2 424 25.0
arahy.Tifrunner.gnm1.ann1.RMM65D Arachis hypogaea HOM05D001849 ORTHO05D004689 2.8e-13 82.4 537 24.4
Hund18672 Selenicereus undatus HOM05D001849 ORTHO05D004689 4.8e-13 81.6 394 25.4
Manes.11G016400 Manihot esculenta HOM05D001849 ORTHO05D004689 6.3e-13 81.3 538 24.5
Aa31LG8G1350 Aethionema arabicum HOM05D001849 ORTHO05D004689 2.4e-12 79.3 466 24.2
Sabra01G0127400 Salix brachista HOM05D001849 ORTHO05D004689 2.4e-12 79.3 539 24.3
vmacro15054 Vaccinium macrocarpon HOM05D001849 ORTHO05D004689 2.4e-12 79.3 530 24.9
TPR.G29992 Trifolium pratense HOM05D001849 ORTHO05D004689 3.1e-12 79.0 431 25.8
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 5.3e-12 78.2 538 24.9
TWI59G1440 Tripterygium wilfordii HOM05D001849 ORTHO05D004689 5.3e-12 78.2 477 24.5
Medtr8g022010 Medicago truncatula HOM05D001849 ORTHO05D004689 1.2e-11 77.0 482 24.9
GSVIVG01016717001 Vitis vinifera HOM05D001849 ORTHO05D004689 1.2e-11 77.0 397 25.7
Sopen12g023890 Solanum pennellii HOM05D001849 ORTHO05D004689 2.6e-11 75.9 424 24.5
PSO724G1390 Papaver somniferum HOM05D001849 ORTHO05D004689 3.4e-11 75.5 445 27.4
QL05p003662 Quercus lobata HOM05D001849 ORTHO05D004689 3.4e-11 75.5 621 24.2
AL3G26350 Arabidopsis lyrata HOM05D001849 ORTHO05D004689 4.5e-11 75.1 469 24.3
CAN.G1243.9 Capsicum annuum HOM05D001849 ORTHO05D004689 4.5e-11 75.1 285 27.0
Cfa003503 Carpinus fangiana HOM05D001849 ORTHO05D004689 5.9e-11 74.7 536 23.7
MBI13_g01700_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004689 5.9e-11 74.7 426 26.1
PSO386G0179 Papaver somniferum HOM05D001849 ORTHO05D004689 5.9e-11 74.7 447 26.8
Sed0016273 Sechium edule HOM05D001849 ORTHO05D004689 7.7e-11 74.3 274 27.4
Carub.0003s1373 Capsella rubella HOM05D001849 ORTHO05D004689 1.0e-10 73.9 469 24.3
Ciclev10027090m.g Citrus clementina HOM05D001849 ORTHO05D004689 1.0e-10 73.9 475 24.8
CSS0036951 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 1.3e-10 73.6 396 25.8
Cc04_g01040 Coffea canephora HOM05D001849 ORTHO05D004689 1.3e-10 73.6 283 26.9
Peaxi162Scf00177g00518 Petunia axillaris HOM05D001849 ORTHO05D004689 1.3e-10 73.6 425 23.5
Gohir.A09G079900 Gossypium hirsutum HOM05D001849 ORTHO05D004689 1.7e-10 73.2 537 25.9
HanXRQChr09g0277131 Helianthus annuus HOM05D001849 ORTHO05D004689 1.7e-10 73.2 402 25.4
Duzib192G0006 Durio zibethinus HOM05D001849 ORTHO05D004689 2.2e-10 72.8 537 24.4
Eucgr.K02038 Eucalyptus grandis HOM05D001849 ORTHO05D004689 2.2e-10 72.8 395 26.8
Duzib235G0671 Durio zibethinus HOM05D001849 ORTHO05D004689 2.9e-10 72.4 536 25.0
Solyc12g049410.3 Solanum lycopersicum HOM05D001849 ORTHO05D004689 2.9e-10 72.4 424 24.3
VMungo0331G1611 Vigna mungo HOM05D001849 ORTHO05D004689 2.9e-10 72.4 461 26.5
CsaV3_7G034250 Cucumis sativus L. HOM05D001849 ORTHO05D004689 3.8e-10 72.0 394 25.1
CSS0050059 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004689 5.0e-10 71.6 292 26.4
AT3G14120 Arabidopsis thaliana HOM05D001849 ORTHO05D004689 6.5e-10 71.2 449 23.8
Glyma.07G042000 Glycine max HOM05D001849 ORTHO05D004689 6.5e-10 71.2 460 26.3
C05p53520 Brassica napus HOM05D001849 ORTHO05D004689 1.1e-09 70.5 449 24.7
BraA05t22343Z Brassica rapa HOM05D001849 ORTHO05D004689 1.1e-09 70.5 449 24.7
Thhalv10019957m.g Eutrema salsugineum HOM05D001849 ORTHO05D004689 1.4e-09 70.1 449 24.7
Sp3g12380 Schrenkiella parvula HOM05D001849 ORTHO05D004689 1.4e-09 70.1 449 24.3
BolC1t05000H Brassica oleracea HOM05D001849 ORTHO05D004689 1.9e-09 69.7 449 24.5
BolC5t34029H Brassica oleracea HOM05D001849 ORTHO05D004689 1.9e-09 69.7 440 24.3
Lalb_Chr10g0101321 Lupinus albus HOM05D001849 ORTHO05D004689 1.9e-09 69.7 312 28.8
SalBow7G1889 Salvia bowleyana HOM05D001849 ORTHO05D004689 1.9e-09 69.7 335 25.1
BcaC05g29121 Brassica carinata HOM05D001849 ORTHO05D004689 2.5e-09 69.3 449 24.3
A05p35330 Brassica napus HOM05D001849 ORTHO05D004689 3.2e-09 68.9 440 24.8
Dinv20408 Davidia involucrata HOM05D001849 ORTHO05D004689 3.2e-09 68.9 254 27.6
TAR626G0833 Trochodendron aralioides HOM05D001849 ORTHO05D004689 3.2e-09 68.9 317 25.9
ECA232G2821 Erigeron canadensis HOM05D001849 ORTHO05D004689 4.2e-09 68.6 423 24.8
Actinidia32206 Actinidia chinensis HOM05D001849 ORTHO05D004689 9.4e-09 67.4 396 25.3
C01p50480 Brassica napus HOM05D001849 ORTHO05D004689 1.2e-08 67.0 483 24.2
Lj9C535G6 Lonicera japonica HOM05D001849 ORTHO05D004689 1.6e-08 66.6 394 25.9
FAN14G1459 Fragaria x ananassa HOM05D001849 ORTHO05D004689 2.1e-08 66.2 456 25.4
A01p39550 Brassica napus HOM05D001849 ORTHO05D004689 2.7e-08 65.9 449 24.7
SGA_v2.0_scaffold4G02078 Striga asiatica HOM05D001849 ORTHO05D004689 2.7e-08 65.9 535 24.5
FvH4_6g35170 Fragaria vesca HOM05D001849 ORTHO05D004689 3.6e-08 65.5 539 24.3
FAN09G4066 Fragaria x ananassa HOM05D001849 ORTHO05D004689 3.6e-08 65.5 488 24.6
Nitab4.5_0000189g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004689 3.6e-08 65.5 263 25.1
Ca_23411_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004689 4.6e-08 65.1 369 24.9
FAN02G0489 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.0e-07 63.9 774 23.1
MD09G1178100 Malus domestica HOM05D001849 ORTHO05D004689 1.0e-07 63.9 574 23.9
THA.LOC104822664 Tarenaya hassleriana HOM05D001849 ORTHO05D004689 1.8e-07 63.2 595 25.7
DCAR_026423 Daucus carota HOM05D001849 ORTHO05D004689 3.9e-07 62.0 558 23.5
MD17G1148600 Malus domestica HOM05D001849 ORTHO05D004689 5.1e-07 61.6 295 26.4
Gohir.D09G079550 Gossypium hirsutum HOM05D001849 ORTHO05D004689 6.7e-07 61.2 541 25.7
MELO3C024334.2 Cucumis melo HOM05D001849 ORTHO05D004689 8.8e-07 60.8 427 23.7
Hma1.2p1_0229F.1_g096760 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 8.8e-07 60.8 394 23.9
Hma1.2p1_0229F.1_g096770 Hydrangea macrophylla HOM05D001849 ORTHO05D004689 8.8e-07 60.8 274 26.3
FAN05G4033 Fragaria x ananassa HOM05D001849 ORTHO05D004689 1.5e-06 60.1 333 26.7
CDE07G1134 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 2.5e-06 59.3 260 25.8
CDE06G0404 Ceratophyllum demersum HOM05D001849 ORTHO05D004689 4.3e-06 58.5 259 25.9
FAN05G2930 Fragaria x ananassa HOM05D001849 ORTHO05D004689 7.4e-06 57.8 528 24.8
RcHm_v2.0_Chr2g0146431 Rosa chinensis HOM05D001849 ORTHO05D004689 7.4e-06 57.8 516 25.0
Oeu008524.4 Olea europaea HOM05D001849 ORTHO05D004689 9.7e-06 57.4 478 23.4


User provided reference genes

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