Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G631 Micromonas commoda HOM05D004647 ORTHO05D005349 5.8e-135 484.2 236 100.0
Cre07.g319900 Chlamydomonas reinhardtii HOM05D004647 ORTHO05D005349 2.6e-26 123.2 193 34.7
HPP92_005895 Vanilla planifolia HOM05D004647 ORTHO05D005349 3.5e-23 112.8 193 35.2
TPR.G19928 Trifolium pratense HOM05D004647 ORTHO05D005349 2.3e-22 110.2 184 35.3
ClCG06G016990 Citrullus lanatus HOM05D004647 ORTHO05D005349 3.0e-22 109.8 184 34.8
Psat2g127400 Pisum sativum HOM05D004647 ORTHO05D005349 5.0e-22 109.0 183 34.4
Glyma.02G112000 Glycine max HOM05D004647 ORTHO05D005349 6.6e-22 108.6 184 34.2
FAN18G2734 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.1e-21 107.8 184 34.2
FAN04G0366 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.5e-21 107.5 184 34.2
FAN08G1047 Fragaria x ananassa HOM05D004647 ORTHO05D005349 1.5e-21 107.5 184 34.2
FvH4_5g05270 Fragaria vesca HOM05D004647 ORTHO05D005349 1.9e-21 107.1 184 34.2
Ca_06453_v3 Cicer arietinum L. HOM05D004647 ORTHO05D005349 2.5e-21 106.7 205 30.2
Zm00001eb157720 Zea mays HOM05D004647 ORTHO05D005349 2.5e-21 106.7 183 32.2
Pp3c9_4960 Physcomitrium patens HOM05D004647 ORTHO05D005349 3.3e-21 106.3 191 30.9
TPR.G14966 Trifolium pratense HOM05D004647 ORTHO05D005349 3.3e-21 106.3 183 32.8
Sed0013198 Sechium edule HOM05D004647 ORTHO05D005349 4.3e-21 105.9 182 33.0
arahy.Tifrunner.gnm1.ann1.HI7WIW Arachis hypogaea HOM05D004647 ORTHO05D005349 5.6e-21 105.5 177 34.5
arahy.Tifrunner.gnm1.ann1.T8C5SJ Arachis hypogaea HOM05D004647 ORTHO05D005349 5.6e-21 105.5 177 34.5
FAN13G1078 Fragaria x ananassa HOM05D004647 ORTHO05D005349 5.6e-21 105.5 184 33.7
RcHm_v2.0_Chr7g0193601 Rosa chinensis HOM05D004647 ORTHO05D005349 5.6e-21 105.5 184 34.2
Lj2g0019057 Lotus japonicus HOM05D004647 ORTHO05D005349 9.5e-21 104.8 183 31.1
Phvul.002G091200 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 9.5e-21 104.8 184 33.2
CANSAT64G1060 Cannabis sativa HOM05D004647 ORTHO05D005349 1.2e-20 104.4 183 32.8
Lalb_Chr10g0098541 Lupinus albus HOM05D004647 ORTHO05D005349 1.2e-20 104.4 184 33.2
Medtr5g043110 Medicago truncatula HOM05D004647 ORTHO05D005349 1.2e-20 104.4 183 33.3
Lsat_1_v5_gn_4_75321 Lactuca sativa HOM05D004647 ORTHO05D005349 1.6e-20 104.0 183 32.8
Glyma.01G053700 Glycine max HOM05D004647 ORTHO05D005349 2.1e-20 103.6 184 33.2
Phvul.003G111100 Phaseolus vulgaris HOM05D004647 ORTHO05D005349 2.8e-20 103.2 184 32.6
Zm00001eb157740 Zea mays HOM05D004647 ORTHO05D005349 2.8e-20 103.2 190 31.6
CiPaw.11G026900 Carya illinoinensis HOM05D004647 ORTHO05D005349 3.6e-20 102.8 184 33.7
Lj5A124T65 Lonicera japonica HOM05D004647 ORTHO05D005349 3.6e-20 102.8 184 34.2
Mapoly0033s0011 Marchantia polymorpha HOM05D004647 ORTHO05D005349 3.6e-20 102.8 183 30.6
Potri.012G080300 Populus trichocarpa HOM05D004647 ORTHO05D005349 3.6e-20 102.8 184 33.2
TWI15G0781 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 3.6e-20 102.8 193 33.2
Prupe.5G174300 Prunus persica HOM05D004647 ORTHO05D005349 4.7e-20 102.4 184 32.6
ATR0680G372 Amborella trichopoda HOM05D004647 ORTHO05D005349 6.2e-20 102.1 192 31.8
QL10p011820 Quercus lobata HOM05D004647 ORTHO05D005349 6.2e-20 102.1 190 31.6
THA.LOC104807116 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 6.2e-20 102.1 183 31.1
THA.LOC104824976 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 6.2e-20 102.1 183 31.1
HanXRQChr16g0504011 Helianthus annuus HOM05D004647 ORTHO05D005349 8.1e-20 101.7 183 32.2
Hma1.2p1_0701F.1_g205920 Hydrangea macrophylla HOM05D004647 ORTHO05D005349 8.1e-20 101.7 184 33.2
DCAR_016485 Daucus carota HOM05D004647 ORTHO05D005349 1.1e-19 101.3 184 32.6
Os01g0661400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.1e-19 101.3 184 32.6
Os01g0891400 Oryza sativa ssp. japonica HOM05D004647 ORTHO05D005349 1.1e-19 101.3 184 33.2
Sabra12G0057400 Salix brachista HOM05D004647 ORTHO05D005349 1.1e-19 101.3 184 33.2
SMO358G0755 Selaginella moellendorffii HOM05D004647 ORTHO05D005349 1.1e-19 101.3 155 35.5
Rhsim12G0164400 Rhododendron simsii HOM05D004647 ORTHO05D005349 1.8e-19 100.5 184 33.2
MBI16_g05634_MAGBIO Magnolia biondii HOM05D004647 ORTHO05D005349 2.3e-19 100.1 191 34.6
Nitab4.5_0000866g0170 Nicotiana tabacum HOM05D004647 ORTHO05D005349 2.3e-19 100.1 183 30.6
Atru.chr9.2461 Acer truncatum HOM05D004647 ORTHO05D005349 3.1e-19 99.8 190 31.6
Cc04_g13970 Coffea canephora HOM05D004647 ORTHO05D005349 3.1e-19 99.8 183 30.6
GSVIVG01007738001 Vitis vinifera HOM05D004647 ORTHO05D005349 3.1e-19 99.8 177 33.9
MSTRG.11448 Avicennia marina HOM05D004647 ORTHO05D005349 4.0e-19 99.4 206 29.6
DCAR_028017 Daucus carota HOM05D004647 ORTHO05D005349 4.0e-19 99.4 175 32.6
Eucgr.B00371 Eucalyptus grandis HOM05D004647 ORTHO05D005349 4.0e-19 99.4 183 31.1
Thecc.03G011300 Theobroma cacao HOM05D004647 ORTHO05D005349 4.0e-19 99.4 175 33.1
unitig_52.g17486 Utricularia gibba HOM05D004647 ORTHO05D005349 4.0e-19 99.4 183 31.1
Ciclev10021986m.g Citrus clementina HOM05D004647 ORTHO05D005349 5.2e-19 99.0 184 32.6
Gohir.A03G097600 Gossypium hirsutum HOM05D004647 ORTHO05D005349 5.2e-19 99.0 188 30.3
Oeu035987.1 Olea europaea HOM05D004647 ORTHO05D005349 6.8e-19 98.6 203 30.0
Actinidia19099 Actinidia chinensis HOM05D004647 ORTHO05D005349 8.9e-19 98.2 184 33.7
Gorai.005G137000 Gossypium raimondii HOM05D004647 ORTHO05D005349 8.9e-19 98.2 184 30.4
vmacro16607 Vaccinium macrocarpon HOM05D004647 ORTHO05D005349 8.9e-19 98.2 183 31.7
Gohir.D02G116700 Gossypium hirsutum HOM05D004647 ORTHO05D005349 1.2e-18 97.8 184 31.0
Manes.14G066300 Manihot esculenta HOM05D004647 ORTHO05D005349 1.2e-18 97.8 183 30.6
PSO017G4490 Papaver somniferum HOM05D004647 ORTHO05D005349 1.2e-18 97.8 184 32.6
PSO478G0146 Papaver somniferum HOM05D004647 ORTHO05D005349 1.2e-18 97.8 184 32.6
PGR083G2070 Punica granatum HOM05D004647 ORTHO05D005349 1.2e-18 97.8 183 31.1
TWI53G1063 Tripterygium wilfordii HOM05D004647 ORTHO05D005349 1.2e-18 97.8 153 34.6
Aqoxy3G01032 Aquilegia oxysepala HOM05D004647 ORTHO05D005349 1.5e-18 97.4 183 31.7
Cpa.g.sc124.56 Carica papaya HOM05D004647 ORTHO05D005349 2.0e-18 97.1 169 35.5
MD06G1174300 Malus domestica HOM05D004647 ORTHO05D005349 2.0e-18 97.1 166 34.3
AagrBONN_evm.TU.Sc2ySwM_117.3294 Anthoceros agrestis HOM05D004647 ORTHO05D005349 2.6e-18 96.7 171 33.3
Carub.0004s0503 Capsella rubella HOM05D004647 ORTHO05D005349 2.6e-18 96.7 183 30.1
Sc10g0010060 Simmondsia chinensis HOM05D004647 ORTHO05D005349 2.6e-18 96.7 184 33.7
TAR374G0909 Trochodendron aralioides HOM05D004647 ORTHO05D005349 2.6e-18 96.7 170 35.3
CAN.G628.78 Capsicum annuum HOM05D004647 ORTHO05D005349 5.8e-18 95.5 166 31.3
Migut.I00016 Erythranthe guttata HOM05D004647 ORTHO05D005349 5.8e-18 95.5 153 33.3
Nitab4.5_0000003g0580 Nicotiana tabacum HOM05D004647 ORTHO05D005349 5.8e-18 95.5 153 32.7
Peaxi162Scf00689g00228 Petunia axillaris HOM05D004647 ORTHO05D005349 5.8e-18 95.5 153 32.7
SGA_v2.0_scaffold90G27942 Striga asiatica HOM05D004647 ORTHO05D005349 7.5e-18 95.1 153 33.3
AUR62030968 Chenopodium quinoa HOM05D004647 ORTHO05D005349 9.8e-18 94.7 183 31.1
ECA232G2959 Erigeron canadensis HOM05D004647 ORTHO05D005349 9.8e-18 94.7 183 31.1
Hund09433 Selenicereus undatus HOM05D004647 ORTHO05D005349 9.8e-18 94.7 183 31.7
CARHR059710 Cardamine hirsuta HOM05D004647 ORTHO05D005349 1.3e-17 94.4 183 30.1
CDE11G0116 Ceratophyllum demersum HOM05D004647 ORTHO05D005349 1.3e-17 94.4 181 33.7
CSS0008435 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 2.9e-17 93.2 177 33.3
AT4G32175 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 3.7e-17 92.8 180 31.1
AL7G19680 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 4.9e-17 92.4 184 31.5
Thhalv10026115m.g Eutrema salsugineum HOM05D004647 ORTHO05D005349 4.9e-17 92.4 183 30.1
BcaC01g01036 Brassica carinata HOM05D004647 ORTHO05D005349 6.4e-17 92.0 183 30.1
A08p18330 Brassica napus HOM05D004647 ORTHO05D005349 6.4e-17 92.0 183 30.1
BraA08t33790Z Brassica rapa HOM05D004647 ORTHO05D005349 6.4e-17 92.0 183 30.1
EL10Ac5g10752 Beta vulgaris HOM05D004647 ORTHO05D005349 1.4e-16 90.9 183 29.5
Sp7g29960 Schrenkiella parvula HOM05D004647 ORTHO05D005349 1.4e-16 90.9 183 30.6
Sopen06g027740 Solanum pennellii HOM05D004647 ORTHO05D005349 1.4e-16 90.9 153 32.0
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 2.4e-16 90.1 154 33.8
QL02p100995 Quercus lobata HOM05D004647 ORTHO05D005349 2.4e-16 90.1 146 33.6
AT2G25355 Arabidopsis thaliana HOM05D004647 ORTHO05D005349 3.2e-16 89.7 183 29.0
CARHR240100 Cardamine hirsuta HOM05D004647 ORTHO05D005349 3.2e-16 89.7 183 29.0
PGSC0003DMG400027091 Solanum tuberosum HOM05D004647 ORTHO05D005349 3.2e-16 89.7 153 31.4
AL4G16790 Arabidopsis lyrata HOM05D004647 ORTHO05D005349 7.1e-16 88.6 183 29.0
BcaB03g12733 Brassica carinata HOM05D004647 ORTHO05D005349 1.2e-15 87.8 183 30.1
BolC3t21057H Brassica oleracea HOM05D004647 ORTHO05D005349 2.1e-15 87.0 183 29.5
Carub.0007s0838 Capsella rubella HOM05D004647 ORTHO05D005349 2.1e-15 87.0 153 32.7
MD06G1174500 Malus domestica HOM05D004647 ORTHO05D005349 3.5e-15 86.3 190 33.2
Solyc06g071460.3 Solanum lycopersicum HOM05D004647 ORTHO05D005349 6.0e-15 85.5 156 31.4
AUR62008215 Chenopodium quinoa HOM05D004647 ORTHO05D005349 1.3e-14 84.3 208 28.4
COL.COLO4_30028 Corchorus olitorius HOM05D004647 ORTHO05D005349 1.3e-14 84.3 217 27.6
SalBow3G4197 Salvia bowleyana HOM05D004647 ORTHO05D005349 2.3e-14 83.6 156 30.8
FAN18G2015 Fragaria x ananassa HOM05D004647 ORTHO05D005349 6.6e-14 82.0 239 26.8
PRCOL_00002933 Prasinoderma coloniale HOM05D004647 ORTHO05D005349 1.9e-13 80.5 157 30.6
SEGI_17588 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.8e-12 76.6 124 36.3
SEGI_39775 Sequoiadendron giganteum HOM05D004647 ORTHO05D005349 2.8e-12 76.6 124 36.3
Dinv02900 Davidia involucrata HOM05D004647 ORTHO05D005349 1.8e-11 73.9 137 31.4
THA.LOC104815465 Tarenaya hassleriana HOM05D004647 ORTHO05D005349 2.3e-11 73.6 126 31.7
Aa31LG2G17760 Aethionema arabicum HOM05D004647 ORTHO05D005349 1.2e-10 71.2 183 27.3
Cfa024128 Carpinus fangiana HOM05D004647 ORTHO05D005349 1.2e-10 71.2 155 35.5
Haze_07464 Corylus avellana HOM05D004647 ORTHO05D005349 9.9e-10 68.2 183 27.3
VMungo1215G3307 Vigna mungo HOM05D004647 ORTHO05D005349 1.1e-08 64.7 98 33.7
Nn3g16872 Nelumbo nucifera HOM05D004647 ORTHO05D005349 1.6e-07 60.8 112 33.9
Medtr5g009430 Medicago truncatula HOM05D004647 ORTHO05D005349 3.0e-06 56.6 96 34.4
CSS0025503 Camellia sinensis var. sinensis HOM05D004647 ORTHO05D005349 8.6e-06 55.1 100 32.0


User provided reference genes

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