Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G460 Micromonas commoda HOM05D004134 ORTHO05D005240 0.0e+00 1233.4 598 100.0
Mapoly0025s0073 Marchantia polymorpha HOM05D004134 ORTHO05D005240 2.7e-136 490.0 615 40.7
CBR_g19000 Chara braunii HOM05D004134 ORTHO05D005240 3.6e-133 479.6 638 40.0
TWI23G0224 Tripterygium wilfordii HOM05D004134 ORTHO05D005240 3.6e-133 479.6 618 40.6
Potri.003G009600 Populus trichocarpa HOM05D004134 ORTHO05D005240 1.4e-132 477.6 620 40.8
Lj8C281T2 Lonicera japonica HOM05D004134 ORTHO05D005240 2.3e-132 476.9 620 41.6
Pp3c18_14790 Physcomitrium patens HOM05D004134 ORTHO05D005240 5.2e-132 475.7 617 41.0
Actinidia26163 Actinidia chinensis HOM05D004134 ORTHO05D005240 6.8e-132 475.3 618 40.8
Manes.02G223500 Manihot esculenta HOM05D004134 ORTHO05D005240 2.6e-131 473.4 615 40.0
CSS0009525 Camellia sinensis var. sinensis HOM05D004134 ORTHO05D005240 7.5e-131 471.9 621 41.4
Phvul.006G218200 Phaseolus vulgaris HOM05D004134 ORTHO05D005240 7.5e-131 471.9 626 40.1
VMungo0540G2254 Vigna mungo HOM05D004134 ORTHO05D005240 9.8e-131 471.5 627 40.5
CSS0031590 Camellia sinensis var. sinensis HOM05D004134 ORTHO05D005240 1.3e-130 471.1 621 41.2
Thecc.01G149600 Theobroma cacao HOM05D004134 ORTHO05D005240 1.3e-130 471.1 626 39.8
PGSC0003DMG400024925 Solanum tuberosum HOM05D004134 ORTHO05D005240 1.7e-130 470.7 629 40.7
PGR042G0619 Punica granatum HOM05D004134 ORTHO05D005240 2.9e-130 469.9 610 40.2
Glyma.16G003700 Glycine max HOM05D004134 ORTHO05D005240 3.7e-130 469.5 626 40.1
THA.LOC104801417 Tarenaya hassleriana HOM05D004134 ORTHO05D005240 3.7e-130 469.5 620 39.5
Gohir.D12G002200 Gossypium hirsutum HOM05D004134 ORTHO05D005240 4.9e-130 469.2 625 40.3
Gorai.008G001600 Gossypium raimondii HOM05D004134 ORTHO05D005240 4.9e-130 469.2 625 40.2
Sed0024495 Sechium edule HOM05D004134 ORTHO05D005240 4.9e-130 469.2 611 41.7
Cre10.g417950 Chlamydomonas reinhardtii HOM05D004134 ORTHO05D005240 1.4e-129 467.6 646 40.2
MELO3C022134.2 Cucumis melo HOM05D004134 ORTHO05D005240 1.4e-129 467.6 620 41.5
SMO361G0066 Selaginella moellendorffii HOM05D004134 ORTHO05D005240 4.1e-129 466.1 635 40.3
CiPaw.05G006000 Carya illinoinensis HOM05D004134 ORTHO05D005240 5.4e-129 465.7 629 40.4
Dinv19398 Davidia involucrata HOM05D004134 ORTHO05D005240 7.0e-129 465.3 626 40.1
Glyma.12G167800 Glycine max HOM05D004134 ORTHO05D005240 7.0e-129 465.3 626 39.0
Lju50A15T20 Lonicera japonica HOM05D004134 ORTHO05D005240 7.0e-129 465.3 630 40.5
Gohir.A12G002500 Gossypium hirsutum HOM05D004134 ORTHO05D005240 9.2e-129 464.9 625 39.8
Sc12g0003380 Simmondsia chinensis HOM05D004134 ORTHO05D005240 2.0e-128 463.8 623 40.0
Duzib147G1693 Durio zibethinus HOM05D004134 ORTHO05D005240 3.5e-128 463.0 626 39.1
Ca_00047_v3 Cicer arietinum L. HOM05D004134 ORTHO05D005240 4.6e-128 462.6 627 39.9
Duzib264G0885 Durio zibethinus HOM05D004134 ORTHO05D005240 4.6e-128 462.6 619 39.1
Nn1g06242 Nelumbo nucifera HOM05D004134 ORTHO05D005240 4.6e-128 462.6 619 40.4
Sp4g27170 Schrenkiella parvula HOM05D004134 ORTHO05D005240 4.6e-128 462.6 611 40.3
Ciclev10000416m.g Citrus clementina HOM05D004134 ORTHO05D005240 5.9e-128 462.2 611 39.6
Atru.chr6.762 Acer truncatum HOM05D004134 ORTHO05D005240 7.8e-128 461.8 612 39.5
TAR381G1335 Trochodendron aralioides HOM05D004134 ORTHO05D005240 7.8e-128 461.8 623 39.8
Lj6g0001374 Lotus japonicus HOM05D004134 ORTHO05D005240 1.0e-127 461.5 617 38.6
BraA05t19492Z Brassica rapa HOM05D004134 ORTHO05D005240 1.3e-127 461.1 615 39.3
BcaB02g08952 Brassica carinata HOM05D004134 ORTHO05D005240 1.7e-127 460.7 616 40.3
Zm00001eb131370 Zea mays HOM05D004134 ORTHO05D005240 1.7e-127 460.7 612 40.7
MSTRG.5116 Avicennia marina HOM05D004134 ORTHO05D005240 2.3e-127 460.3 623 40.1
A05p05210 Brassica napus HOM05D004134 ORTHO05D005240 2.3e-127 460.3 615 39.2
CsaV3_5G039580 Cucumis sativus L. HOM05D004134 ORTHO05D005240 2.3e-127 460.3 620 41.0
Lsat_1_v5_gn_7_76380 Lactuca sativa HOM05D004134 ORTHO05D005240 5.0e-127 459.1 611 40.6
TPR.G2118 Trifolium pratense HOM05D004134 ORTHO05D005240 5.0e-127 459.1 627 38.8
BcaC02g12241 Brassica carinata HOM05D004134 ORTHO05D005240 6.6e-127 458.8 615 39.2
C04p06100 Brassica napus HOM05D004134 ORTHO05D005240 6.6e-127 458.8 615 39.2
BolC4t22236H Brassica oleracea HOM05D004134 ORTHO05D005240 6.6e-127 458.8 615 39.2
RhsimUnG0241700 Rhododendron simsii HOM05D004134 ORTHO05D005240 6.6e-127 458.8 629 38.8
COL.COLO4_33567 Corchorus olitorius HOM05D004134 ORTHO05D005240 8.6e-127 458.4 630 39.0
Aa31LG3G10940 Aethionema arabicum HOM05D004134 ORTHO05D005240 1.9e-126 457.2 619 38.4
Psat0s1535g0080 Pisum sativum HOM05D004134 ORTHO05D005240 1.9e-126 457.2 621 39.1
CANSAT54G0881 Cannabis sativa HOM05D004134 ORTHO05D005240 3.3e-126 456.4 621 40.1
Rhsim10G0097200 Rhododendron simsii HOM05D004134 ORTHO05D005240 4.3e-126 456.1 646 39.0
Haze_10066 Corylus avellana HOM05D004134 ORTHO05D005240 9.5e-126 454.9 626 39.1
Haze_10069 Corylus avellana HOM05D004134 ORTHO05D005240 9.5e-126 454.9 626 39.1
Prupe.7G053600 Prunus persica HOM05D004134 ORTHO05D005240 1.6e-125 454.1 631 39.5
Cfa014311 Carpinus fangiana HOM05D004134 ORTHO05D001258 2.8e-125 453.4 624 38.9
AL4G38180 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 1.0e-124 451.4 620 38.9
AT2G40360 Arabidopsis thaliana HOM05D004134 ORTHO05D005240 2.3e-124 450.3 614 38.3
BcaB01g03295 Brassica carinata HOM05D004134 ORTHO05D005240 3.1e-124 449.9 615 39.0
Carub.0004s2260 Capsella rubella HOM05D004134 ORTHO05D005240 4.0e-124 449.5 609 38.8
BolC3t15332H Brassica oleracea HOM05D004134 ORTHO05D005240 5.2e-124 449.1 617 39.4
A03p25010 Brassica napus HOM05D004134 ORTHO05D005240 6.8e-124 448.7 616 39.4
C03p29850 Brassica napus HOM05D004134 ORTHO05D005240 6.8e-124 448.7 616 39.4
BcaC01g05160 Brassica carinata HOM05D004134 ORTHO05D005240 8.9e-124 448.4 617 39.4
BraA03t11704Z Brassica rapa HOM05D004134 ORTHO05D005240 8.9e-124 448.4 614 39.4
Lj8C283T12 Lonicera japonica HOM05D004134 ORTHO05D005240 1.2e-123 448.0 619 40.2
CAN.G798.51 Capsicum annuum HOM05D004134 ORTHO05D005240 2.0e-123 447.2 616 40.6
CARHR135440 Cardamine hirsuta HOM05D004134 ORTHO05D005240 4.4e-123 446.0 623 38.0
Migut.B00788 Erythranthe guttata HOM05D004134 ORTHO05D005240 4.4e-123 446.0 623 39.8
Medtr2g006020 Medicago truncatula HOM05D004134 ORTHO05D005240 6.4e-122 442.2 670 36.4
arahy.Tifrunner.gnm1.ann1.PV76CP Arachis hypogaea HOM05D004134 ORTHO05D005240 1.4e-121 441.0 615 39.2
SGA_v2.0_scaffold272G46372 Striga asiatica HOM05D004134 ORTHO05D005240 1.4e-121 441.0 637 38.3
arahy.Tifrunner.gnm1.ann1.FJZE1E Arachis hypogaea HOM05D004134 ORTHO05D005240 1.9e-121 440.7 615 39.2
PSO384G1237 Papaver somniferum HOM05D004134 ORTHO05D005240 1.9e-121 440.7 619 39.3
SMO004G0015 Selaginella moellendorffii HOM05D004134 ORTHO05D005240 1.9e-121 440.7 613 40.3
HanXRQChr07g0187421 Helianthus annuus HOM05D004134 ORTHO05D005240 2.4e-121 440.3 631 38.7
PSO339G3543 Papaver somniferum HOM05D004134 ORTHO05D005240 3.2e-121 439.9 619 39.1
Eucgr.G00349 Eucalyptus grandis HOM05D004134 ORTHO05D005240 1.6e-120 437.6 622 38.6
vmacro19872 Vaccinium macrocarpon HOM05D004134 ORTHO05D005240 2.0e-120 437.2 626 37.4
QL02p100166 Quercus lobata HOM05D004134 ORTHO05D005240 6.0e-120 435.6 648 37.7
MD05G1062400 Malus domestica HOM05D004134 ORTHO05D005240 1.9e-118 430.6 626 38.7
FvH4_5g21650 Fragaria vesca HOM05D004134 ORTHO05D005240 5.6e-118 429.1 621 37.2
FAN18G3216 Fragaria x ananassa HOM05D004134 ORTHO05D005240 5.6e-118 429.1 621 37.2
unitig_899.g15494 Utricularia gibba HOM05D004134 ORTHO05D005240 7.3e-118 428.7 603 38.6
MD10G1070100 Malus domestica HOM05D004134 ORTHO05D005240 1.2e-117 427.9 620 38.4
Hund16551 Selenicereus undatus HOM05D004134 ORTHO05D005240 1.6e-117 427.6 661 36.3
DCAR_001836 Daucus carota HOM05D004134 ORTHO05D005240 2.1e-117 427.2 671 36.7
PRCOL_00006650 Prasinoderma coloniale HOM05D004134 ORTHO05D005240 6.2e-117 425.6 699 36.1
SGA_v2.0_scaffold304G47905 Striga asiatica HOM05D004134 ORTHO05D005240 1.8e-116 424.1 652 37.0
EL10Ac6g14818 Beta vulgaris HOM05D004134 ORTHO05D005240 5.2e-116 422.5 628 36.1
Aqoxy6G03049 Aquilegia oxysepala HOM05D004134 ORTHO05D005240 2.2e-114 417.2 626 36.6
Thhalv10001320m.g Eutrema salsugineum HOM05D004134 ORTHO05D005240 4.9e-114 416.0 582 37.5
Solyc01g103720.4 Solanum lycopersicum HOM05D004134 ORTHO05D005240 6.4e-114 415.6 580 40.7
GSVIVG01004116001 Vitis vinifera HOM05D004134 ORTHO05D005240 1.2e-112 411.4 601 38.4
Haze_26888 Corylus avellana HOM05D004134 ORTHO05D005240 2.7e-112 410.2 626 36.7
MBI13_g20493_MAGBIO Magnolia biondii HOM05D004134 ORTHO05D005240 3.5e-112 409.8 583 38.4
Potri.004G222500 Populus trichocarpa HOM05D004134 ORTHO05D005240 3.0e-111 406.8 505 42.6
PSO063G3695 Papaver somniferum HOM05D004134 ORTHO05D005240 1.1e-110 404.8 620 36.8
FAN04G2346 Fragaria x ananassa HOM05D004134 ORTHO05D005240 1.5e-110 404.4 627 35.7
Hma1.2p1_0427F.1_g150710 Hydrangea macrophylla HOM05D004134 ORTHO05D005240 1.9e-110 404.1 615 36.9
Sabra01G0168600 Salix brachista HOM05D004134 ORTHO05D005240 1.2e-109 401.4 660 35.8
AL3G45050 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 1.1e-108 398.3 606 35.8
Oeu034147.1 Olea europaea HOM05D004134 ORTHO05D005240 1.1e-108 398.3 605 37.2
FAN13G2390 Fragaria x ananassa HOM05D004134 ORTHO05D005240 1.7e-106 391.0 664 34.6
RcHm_v2.0_Chr7g0209131 Rosa chinensis HOM05D004134 ORTHO05D005240 8.4e-106 388.7 613 36.1
RcHm_v2.0_Chr7g0241541 Rosa chinensis HOM05D004134 ORTHO05D005240 8.4e-106 388.7 626 35.0
Sabra03G0005000 Salix brachista HOM05D004134 ORTHO05D005240 4.6e-104 382.9 580 36.7
SalBow1G3184 Salvia bowleyana HOM05D004134 ORTHO05D005240 1.9e-102 377.5 615 36.3
AagrBONN_evm.TU.Sc2ySwM_344.2863 Anthoceros agrestis HOM05D004134 ORTHO05D005240 1.4e-100 371.3 521 38.2
CARHR115520 Cardamine hirsuta HOM05D004134 ORTHO05D005240 2.6e-99 367.1 503 38.4
Dinv07474 Davidia involucrata HOM05D004134 ORTHO05D005240 1.2e-96 358.2 539 36.9
SalBow8G0286 Salvia bowleyana HOM05D004134 ORTHO05D005240 1.1e-94 351.7 622 35.4
Cfa026475 Carpinus fangiana HOM05D004134 ORTHO05D005240 2.1e-93 347.4 643 33.3
Nitab4.5_0002596g0050 Nicotiana tabacum HOM05D004134 ORTHO05D005240 7.4e-86 322.4 599 32.6
Haze_12759 Corylus avellana HOM05D004134 ORTHO05D005240 6.2e-85 319.3 500 37.4
Prupe.6G114000 Prunus persica HOM05D004134 ORTHO05D005240 2.2e-82 310.8 655 31.9
Nitab4.5_0000948g0120 Nicotiana tabacum HOM05D004134 ORTHO05D005240 1.4e-76 291.6 603 30.7
Cpa.g.sc612.1 Carica papaya HOM05D004134 ORTHO05D005240 2.6e-75 287.3 608 29.3
SalBow8G2435 Salvia bowleyana HOM05D004134 ORTHO05D005240 9.3e-73 278.9 605 31.2
Sopen01g046140 Solanum pennellii HOM05D004134 ORTHO05D005240 9.3e-73 278.9 433 37.0
ClCG08G001520 Citrullus lanatus HOM05D004134 ORTHO05D005240 1.2e-72 278.5 429 38.2
Peaxi162Scf00011g00938 Petunia axillaris HOM05D004134 ORTHO05D005240 3.7e-69 266.9 364 38.2
SalBow8G3818 Salvia bowleyana HOM05D004134 ORTHO05D005240 3.7e-69 266.9 520 31.7
Lalb_Chr21g0308281 Lupinus albus HOM05D004134 ORTHO05D005240 6.3e-69 266.2 432 34.5
Cc07_g19170 Coffea canephora HOM05D004134 ORTHO05D005240 3.1e-68 263.8 424 34.4
RcHm_v2.0_Chr7g0241521 Rosa chinensis HOM05D004134 ORTHO05D005240 2.9e-66 257.3 425 34.1
ATR0598G150 Amborella trichopoda HOM05D004134 ORTHO05D005240 1.2e-64 251.9 422 34.8
ATR0681G288 Amborella trichopoda HOM05D004134 ORTHO05D005240 1.6e-64 251.5 422 33.9
AUR62027202 Chenopodium quinoa HOM05D004134 ORTHO05D005240 1.3e-63 248.4 425 33.2
AL6G11500 Arabidopsis lyrata HOM05D004134 ORTHO05D005240 1.8e-63 248.1 315 39.4
Ah.09g229700 Amaranthus hybridus HOM05D004134 ORTHO05D005240 1.5e-62 245.0 420 33.3
AUR62003266 Chenopodium quinoa HOM05D004134 ORTHO05D005240 2.0e-51 208.0 316 36.7
Lalb_Chr21g0308271 Lupinus albus HOM05D004134 ORTHO05D005240 2.9e-50 204.1 194 48.5
Cc07_g19180 Coffea canephora HOM05D004134 ORTHO05D005240 3.8e-50 203.8 192 52.1
ATR0681G369 Amborella trichopoda HOM05D004134 ORTHO05D005240 5.0e-50 203.4 186 51.1
ATR0598G203 Amborella trichopoda HOM05D004134 ORTHO05D005240 6.5e-50 203.0 186 51.6
Sopen01g046130 Solanum pennellii HOM05D004134 ORTHO05D005240 1.2e-48 198.7 179 53.1
HPP92_014183 Vanilla planifolia HOM05D004134 ORTHO05D005240 8.8e-47 192.6 370 32.4
Ah.09g232800 Amaranthus hybridus HOM05D004134 ORTHO05D005240 1.1e-46 192.2 397 30.7
TAR376G0266 Trochodendron aralioides HOM05D004134 ORTHO05D005240 3.3e-46 190.7 163 53.4
HPP92_014184 Vanilla planifolia HOM05D004134 ORTHO05D005240 4.1e-44 183.7 151 55.6
Carub.0008s0866 Capsella rubella HOM05D004134 ORTHO05D005240 1.3e-42 178.7 188 47.3
RcHm_v2.0_Chr7g0241531 Rosa chinensis HOM05D004134 ORTHO05D005240 4.2e-41 173.7 186 45.2
ClCG09G010900 Citrullus lanatus HOM05D004134 ORTHO05D005240 3.0e-39 167.5 134 56.7
Ah.09g229690 Amaranthus hybridus HOM05D004134 ORTHO05D005240 3.2e-33 147.5 166 45.2
Cpa.g.sc5814.1 Carica papaya HOM05D004134 ORTHO05D005240 4.2e-33 147.1 206 37.9
A05p05190 Brassica napus HOM05D004134 ORTHO05D005240 7.2e-33 146.4 149 47.7
SalBow8G0646 Salvia bowleyana HOM05D004134 ORTHO05D005240 5.7e-30 136.7 103 59.2
BcaC02g12245 Brassica carinata HOM05D004134 ORTHO05D005240 3.6e-24 117.5 111 48.6
Lsat_1_v5_gn_5_138060 Lactuca sativa HOM05D004134 ORTHO05D005240 1.3e-21 109.0 113 45.1
Peaxi162Scf00011g00939 Petunia axillaris HOM05D004134 ORTHO05D005240 2.2e-21 108.2 83 61.4
ECA236G2574 Erigeron canadensis HOM05D004134 ORTHO05D005240 1.4e-20 105.5 130 40.0
C04p06060 Brassica napus HOM05D004134 ORTHO05D005240 5.9e-19 100.1 79 53.2
Migut.I00323 Erythranthe guttata HOM05D004134 ORTHO05D005240 8.0e-16 89.7 76 55.3
TAR087G0001 Trochodendron aralioides HOM05D004134 ORTHO05D005240 6.4e-13 80.1 79 44.3
Lsat_1_v5_gn_2_109841 Lactuca sativa HOM05D004134 ORTHO05D005240 7.0e-12 76.6 74 47.3
SGA_v2.0_scaffold318G48508 Striga asiatica HOM05D001260 ORTHO05D002424 5.6e-09 67.0 69 47.8
TPR.G18539 Trifolium pratense HOM05D001024 ORTHO05D000878 3.6e-08 64.3 84 35.7
BcaC01g05161 Brassica carinata HOM05D004134 ORTHO05D005240 1.1e-07 62.8 65 43.1


User provided reference genes

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