Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO01G407 Micromonas commoda HOM05D004944 ORTHO05D005989 0.0e+00 1506.1 748 100.0
Sp6g04870 Schrenkiella parvula HOM05D004944 ORTHO05D005989 4.8e-42 177.2 658 26.9
Thhalv10024629m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 6.9e-41 173.3 726 26.2
AL7G21230 Arabidopsis lyrata HOM05D004944 ORTHO05D005989 2.6e-40 171.4 734 25.6
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 1.3e-39 169.1 682 28.3
VMungo1080G1012 Vigna mungo HOM05D004944 ORTHO05D005989 6.5e-39 166.8 664 27.7
BraA09t38244Z Brassica rapa HOM05D004944 ORTHO05D005989 1.9e-38 165.2 660 26.7
AT4G30870 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 3.2e-38 164.5 727 25.6
A09p26720 Brassica napus HOM05D004944 ORTHO05D005989 5.5e-38 163.7 660 26.5
Lj3g0016020 Lotus japonicus HOM05D004944 ORTHO05D005989 7.1e-38 163.3 668 27.4
BcaB01g01761 Brassica carinata HOM05D004944 ORTHO05D005989 9.3e-38 162.9 642 26.6
Eucgr.G03259 Eucalyptus grandis HOM05D004944 ORTHO05D005989 1.2e-37 162.5 681 27.6
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.2e-37 162.5 654 26.6
BcaC04g21249 Brassica carinata HOM05D004944 ORTHO05D005989 1.6e-37 162.2 655 26.6
C09p33850 Brassica napus HOM05D004944 ORTHO05D005989 1.6e-37 162.2 655 26.6
BolC9t56223H Brassica oleracea HOM05D004944 ORTHO05D005989 1.6e-37 162.2 655 26.6
Carub.0007s0968 Capsella rubella HOM05D004944 ORTHO05D005989 1.6e-37 162.2 700 25.7
Medtr3g022850 Medicago truncatula HOM05D004944 ORTHO05D005989 2.1e-37 161.8 669 25.7
arahy.Tifrunner.gnm1.ann1.L5CKR4 Arachis hypogaea HOM05D004944 ORTHO05D005989 4.6e-37 160.6 664 27.4
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 4.6e-37 160.6 670 26.6
AUR62026814 Chenopodium quinoa HOM05D004944 ORTHO05D005989 7.9e-37 159.8 642 27.6
CARHR238770 Cardamine hirsuta HOM05D004944 ORTHO05D005989 1.3e-36 159.1 719 25.5
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 1.3e-36 159.1 694 26.7
SEGI_11905 Sequoiadendron giganteum HOM05D004944 ORTHO05D005989 1.3e-36 159.1 677 26.4
CANSAT80G2771 Cannabis sativa HOM05D004944 ORTHO05D005989 2.3e-36 158.3 676 26.8
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 5.1e-36 157.1 684 26.2
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 1.1e-35 156.0 669 27.4
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 2.5e-35 154.8 660 26.5
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 2.5e-35 154.8 670 27.3
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 3.3e-35 154.5 679 26.8
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 3.3e-35 154.5 690 27.0
HanXRQChr05g0145061 Helianthus annuus HOM05D004944 ORTHO05D005989 4.3e-35 154.1 672 25.9
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 7.4e-35 153.3 652 24.5
Pp3c16_12330 Physcomitrium patens HOM05D004944 ORTHO05D005989 7.4e-35 153.3 657 27.1
Sed0005559 Sechium edule HOM05D004944 ORTHO05D005989 9.7e-35 152.9 654 25.5
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 9.7e-35 152.9 662 25.5
Aa31LG2G19510 Aethionema arabicum HOM05D004944 ORTHO05D005989 1.6e-34 152.1 721 24.4
CBR_g44528 Chara braunii HOM05D004944 ORTHO05D005989 2.2e-34 151.8 317 31.5
ECA232G0518 Erigeron canadensis HOM05D004944 ORTHO05D005989 2.8e-34 151.4 669 26.3
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 2.8e-34 151.4 677 26.6
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 6.3e-34 150.2 646 27.7
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 6.3e-34 150.2 651 25.7
SGA_v2.0_scaffold5G02935 Striga asiatica HOM05D004944 ORTHO05D005989 8.2e-34 149.8 668 25.7
Glyma.11G150100 Glycine max HOM05D004944 ORTHO05D005989 1.1e-33 149.4 661 27.2
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 1.4e-33 149.1 681 26.1
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 1.8e-33 148.7 718 25.3
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 2.4e-33 148.3 685 25.4
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 3.1e-33 147.9 319 32.6
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 5.3e-33 147.1 661 25.9
arahy.Tifrunner.gnm1.ann1.YV81B1 Arachis hypogaea HOM05D004944 ORTHO05D005989 1.2e-32 146.0 676 25.7
PSO384G2132 Papaver somniferum HOM05D004944 ORTHO05D005989 1.5e-32 145.6 415 29.6
Migut.N01817 Erythranthe guttata HOM05D004944 ORTHO05D005989 2.0e-32 145.2 687 24.9
MELO3C012446.2 Cucumis melo HOM05D004944 ORTHO05D005989 2.6e-32 144.8 653 25.1
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 2.6e-32 144.8 313 32.9
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 3.4e-32 144.4 667 27.0
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.4e-32 144.4 657 25.7
Mapoly0005s0161 Marchantia polymorpha HOM05D004944 ORTHO05D005989 4.5e-32 144.1 644 26.2
PSO339G0509 Papaver somniferum HOM05D004944 ORTHO05D005989 4.5e-32 144.1 372 31.2
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 5.9e-32 143.7 320 31.2
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 5.9e-32 143.7 665 25.4
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 1.7e-31 142.1 652 26.5
PRCOL_00004679 Prasinoderma coloniale HOM05D004944 ORTHO05D005989 3.8e-31 141.0 325 32.9
Haze_03113 Corylus avellana HOM05D004944 ORTHO05D005989 6.5e-31 140.2 346 31.8
FAN03G3505 Fragaria x ananassa HOM05D004944 ORTHO05D005989 8.5e-31 139.8 718 24.8
Lsat_1_v5_gn_9_47141 Lactuca sativa HOM05D004944 ORTHO05D005989 8.5e-31 139.8 294 33.0
FAN06G2455 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.1e-30 139.4 697 25.0
Thhalv10024809m.g Eutrema salsugineum HOM05D004944 ORTHO05D005989 1.9e-30 138.7 405 27.9
Carub.0007s3598 Capsella rubella HOM05D004944 ORTHO05D005989 2.5e-30 138.3 321 29.3
CiPaw.13G010200 Carya illinoinensis HOM05D004944 ORTHO05D005989 5.5e-30 137.1 681 26.0
PSO782G0837 Papaver somniferum HOM05D004944 ORTHO05D005989 5.5e-30 137.1 324 30.6
AagrBONN_evm.TU.Sc2ySwM_228.3522 Anthoceros agrestis HOM05D004944 ORTHO05D005989 1.2e-29 136.0 451 26.8
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 1.2e-29 136.0 320 31.9
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 1.2e-29 136.0 317 31.5
FAN01G0470 Fragaria x ananassa HOM05D004944 ORTHO05D005989 1.6e-29 135.6 726 24.9
MD07G1077800 Malus domestica HOM05D004944 ORTHO05D005989 1.6e-29 135.6 319 32.3
CDE01G0132 Ceratophyllum demersum HOM05D004944 ORTHO05D005989 4.6e-29 134.0 614 25.7
EL10Ac2g02867 Beta vulgaris HOM05D004944 ORTHO05D005989 6.1e-29 133.7 290 33.1
RcHm_v2.0_Chr1g0319541 Rosa chinensis HOM05D004944 ORTHO05D005989 3.0e-28 131.3 320 30.3
FvH4_7g02220 Fragaria vesca HOM05D004944 ORTHO05D005989 5.1e-28 130.6 319 31.0
MBI17_g24522_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 6.7e-28 130.2 556 27.5
AUR62037239 Chenopodium quinoa HOM05D004944 ORTHO05D005989 1.1e-27 129.4 317 31.5
Aqoxy1G00293 Aquilegia oxysepala HOM05D004944 ORTHO05D005989 3.3e-27 127.9 315 29.8
COL.COLO4_25841 Corchorus olitorius HOM05D004944 ORTHO05D005989 5.7e-27 127.1 281 32.4
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 1.3e-26 125.9 411 26.8
HPP92_001459 Vanilla planifolia HOM05D004944 ORTHO05D005989 3.7e-26 124.4 323 28.8
Os01g0948100 Oryza sativa ssp. japonica HOM05D004944 ORTHO05D005989 1.1e-25 122.9 507 26.4
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 1.4e-25 122.5 299 32.8
Rhsim07G0062200 Rhododendron simsii HOM05D004944 ORTHO05D005989 3.1e-25 121.3 347 28.0
Cfa010847 Carpinus fangiana HOM05D004944 ORTHO05D005989 3.4e-24 117.9 656 26.2
ClCG05G020810 Citrullus lanatus HOM05D004944 ORTHO05D005989 4.5e-24 117.5 368 29.3
AT5G39770 Arabidopsis thaliana HOM05D004944 ORTHO05D005989 7.7e-24 116.7 720 22.9
Haze_26725 Corylus avellana HOM05D004944 ORTHO05D005989 1.3e-23 115.9 301 29.2
Zm00001eb141350 Zea mays HOM05D004944 ORTHO05D005989 1.3e-23 115.9 331 29.6
Cpa.g.sc197.13 Carica papaya HOM05D004944 ORTHO05D005989 6.5e-23 113.6 276 32.2
Cfa010848 Carpinus fangiana HOM05D004944 ORTHO05D005989 6.5e-23 113.6 347 30.0
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 8.5e-23 113.2 319 29.2
TPR.G18800 Trifolium pratense HOM05D004944 ORTHO05D005989 1.1e-22 112.8 674 24.5
Manes.04G164000 Manihot esculenta HOM05D004944 ORTHO05D005989 1.9e-22 112.1 500 26.6
DCAR_009210 Daucus carota HOM05D004944 ORTHO05D005989 3.2e-22 111.3 267 31.5
Sc10g0004240 Simmondsia chinensis HOM05D004944 ORTHO05D005989 4.2e-22 110.9 274 32.1
Cre12.g555050 Chlamydomonas reinhardtii HOM05D004944 ORTHO05D005989 1.6e-21 109.0 309 30.7
MBI17_g33308_MAGBIO Magnolia biondii HOM05D004944 ORTHO05D005989 3.6e-21 107.8 261 32.2
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 6.7e-20 103.6 267 31.5
Zm00001eb141330 Zea mays HOM05D004944 ORTHO05D005989 4.8e-18 97.4 473 26.8
Solyc01g068340.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.8e-17 95.5 453 25.2
BcaNung04417 Brassica carinata HOM05D000343 ORTHO05D003187 1.9e-14 85.5 161 32.3
Gohir.A13G013200 Gossypium hirsutum HOM05D004944 ORTHO05D005989 3.6e-13 81.3 450 24.2
CsaV3_5G036480 Cucumis sativus L. HOM05D004944 ORTHO05D005989 3.0e-12 78.2 116 38.8
vmacro13723 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 1.5e-11 75.9 118 37.3
ATR0721G036 Amborella trichopoda HOM05D004944 ORTHO05D005989 3.1e-09 68.2 197 27.9
vmacro13724 Vaccinium macrocarpon HOM05D004944 ORTHO05D005989 5.9e-08 63.9 161 31.7
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 3.8e-07 61.2 195 27.2


User provided reference genes

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