Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g06578_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.3e-58 229.6 120 100.0
MBI18_g37247_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.6e-48 194.9 110 90.9
MBI13_g35169_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.8e-39 166.0 91 91.2
MBI15_g40133_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 4.4e-38 161.4 108 80.6
MBI15_g02191_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 9.4e-33 143.7 79 94.9
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 2.6e-27 125.6 101 62.4
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 3.5e-27 125.2 101 63.4
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.5e-25 119.8 100 64.0
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.9e-25 119.4 101 62.4
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 4.7e-24 114.8 103 60.2
MBI16_g24355_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 4.0e-23 111.7 103 59.2
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-22 110.2 102 57.8
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.7e-21 105.1 100 56.0
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 3.7e-21 105.1 101 52.5
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 4.8e-21 104.8 101 51.5
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.3e-21 104.4 102 54.9
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 8.3e-21 104.0 100 57.0
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 8.3e-21 104.0 102 54.9
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 1.1e-20 103.6 101 51.5
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.1e-20 103.6 101 52.5
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.4e-20 103.2 130 45.4
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.4e-20 103.2 102 53.9
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.4e-20 103.2 101 52.5
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 1.8e-20 102.8 101 53.5
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 1.8e-20 102.8 129 45.0
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 2.4e-20 102.4 101 52.5
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 3.1e-20 102.1 130 45.4
MBI14_g36712_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.1e-20 102.1 98 59.2
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 5.3e-20 101.3 101 53.5
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 5.3e-20 101.3 128 46.1
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 7.0e-20 100.9 101 50.5
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 9.1e-20 100.5 130 44.6
CDE11G0683 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 9.1e-20 100.5 101 51.5
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 9.1e-20 100.5 102 53.9
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.1e-20 100.5 102 53.9
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.1e-20 100.5 102 53.9
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 9.1e-20 100.5 102 53.9
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 9.1e-20 100.5 101 52.5
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.2e-19 100.1 102 52.9
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 2.0e-19 99.4 101 51.5
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.7e-19 99.0 102 52.9
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 2.7e-19 99.0 102 52.9
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 2.7e-19 99.0 101 50.5
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 3.5e-19 98.6 101 48.5
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 4.5e-19 98.2 101 48.5
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 4.5e-19 98.2 101 50.5
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 4.5e-19 98.2 101 55.4
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 4.5e-19 98.2 101 55.4
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 5.9e-19 97.8 130 45.4
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 1.3e-18 96.7 101 54.5
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.3e-18 96.7 101 53.5
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 1.3e-18 96.7 130 43.1
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 1.7e-18 96.3 101 48.5
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 1.7e-18 96.3 101 50.5
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 1.7e-18 96.3 101 50.5
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.7e-18 96.3 101 48.5
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 1.7e-18 96.3 101 53.5
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 2.2e-18 95.9 98 51.0
CSS0024398 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 2.9e-18 95.5 101 53.5
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 3.8e-18 95.1 101 48.5
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 3.8e-18 95.1 101 46.5
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 3.8e-18 95.1 98 51.0
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 5.0e-18 94.7 101 47.5
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 6.5e-18 94.4 101 51.5
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 6.5e-18 94.4 101 49.5
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 6.5e-18 94.4 101 48.5
Gohir.D11G082433 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.1e-17 93.6 101 51.5
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 1.1e-17 93.6 102 50.0
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 1.5e-17 93.2 101 51.5
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 1.5e-17 93.2 101 51.5
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 1.5e-17 93.2 101 49.5
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.9e-17 92.8 101 52.5
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 1.9e-17 92.8 101 46.5
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 1.9e-17 92.8 130 43.1
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 2.5e-17 92.4 101 49.5
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 2.5e-17 92.4 101 52.5
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.2e-17 92.0 101 51.5
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 3.2e-17 92.0 101 51.5
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 3.2e-17 92.0 98 49.0
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 4.2e-17 91.7 101 47.5
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 4.2e-17 91.7 101 47.5
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 5.5e-17 91.3 101 49.5
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 7.2e-17 90.9 101 50.5
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 7.2e-17 90.9 100 51.0
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 9.4e-17 90.5 101 49.5
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 1.6e-16 89.7 101 48.5
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.6e-16 89.7 101 48.5
CSS0019437 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D011598 2.1e-16 89.4 105 50.5
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 2.1e-16 89.4 130 41.5
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 2.7e-16 89.0 101 45.5
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 2.7e-16 89.0 101 49.5
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 2.7e-16 89.0 101 49.5
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.6e-16 88.6 114 48.2
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 4.7e-16 88.2 129 41.9
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 6.1e-16 87.8 101 45.5
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 6.1e-16 87.8 103 47.6
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 8.0e-16 87.4 98 42.9
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 8.0e-16 87.4 101 45.5
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 2.3e-15 85.9 101 47.5
MBI17_g44285_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.3e-15 85.9 75 60.0
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.3e-15 85.9 101 45.5
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 2.3e-15 85.9 101 45.5
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 2.3e-15 85.9 101 47.5
MBI18_g40791_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 3.0e-15 85.5 73 60.3
MBI15_g00867_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 5.2e-15 84.7 73 60.3
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 6.8e-15 84.3 102 48.0
MBI05_g28277_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 8.8e-15 84.0 59 81.4
MBI14_g46623_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 8.8e-15 84.0 73 58.9
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 1.5e-14 83.2 130 39.2
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 2.0e-14 82.8 101 45.5
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 2.0e-14 82.8 101 42.6
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 3.4e-14 82.0 86 47.7
CSS0045688 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D011598 4.4e-14 81.6 101 46.5
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 4.4e-14 81.6 101 43.6
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 7.5e-14 80.9 126 38.9
MBI03_g02276_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 7.5e-14 80.9 73 58.9
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 9.8e-14 80.5 98 44.9
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.3e-13 80.1 101 45.5
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 1.7e-13 79.7 97 39.2
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 2.2e-13 79.3 101 37.6
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 4.8e-13 78.2 102 46.1
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 6.3e-13 77.8 101 44.6
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 1.1e-12 77.0 101 43.6
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.8e-12 76.3 101 38.6
unitig_0.g1315 Utricularia gibba HOM05D001670 ORTHO05D002980 2.4e-12 75.9 101 43.6
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 3.1e-12 75.5 101 40.6
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 3.1e-12 75.5 101 41.6
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 5.4e-12 74.7 94 42.6
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.2e-11 73.6 101 39.6
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 2.0e-11 72.8 96 40.6
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 4.5e-11 71.6 101 38.6
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-10 70.1 101 39.6
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.9e-10 68.9 129 35.7
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 6.6e-10 67.8 101 43.6
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 6.6e-10 67.8 101 43.6
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 8.6e-10 67.4 99 39.4
Actinidia12668 Actinidia chinensis HOM05D001670 ORTHO05D011598 1.9e-09 66.2 87 46.0
CiPaw.14G024400 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.9e-09 66.2 73 45.2
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 3.3e-09 65.5 101 39.6
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 3.3e-09 65.5 102 39.2
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 3.3e-09 65.5 101 39.6
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 5.5e-09 64.7 108 38.0
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 7.2e-09 64.3 129 34.1
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 7.2e-09 64.3 102 38.2
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 9.5e-09 63.9 101 41.6
SHI13579 Sapria himalayana HOM05D001670 ORTHO05D002980 9.5e-09 63.9 102 39.2
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 1.2e-08 63.5 111 37.8
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 1.6e-08 63.2 129 34.1
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 2.1e-08 62.8 98 39.8
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 2.1e-08 62.8 101 38.6
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 2.1e-08 62.8 101 38.6
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 2.8e-08 62.4 101 33.7
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 4.7e-08 61.6 101 39.6
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 4.7e-08 61.6 101 39.6
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 4.7e-08 61.6 101 39.6
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 1.8e-07 59.7 111 36.0


User provided reference genes

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