Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g40314_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 4.4e-86 321.2 160 100.0
MBI14_g25881_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 3.9e-58 228.4 112 99.1
MBI14_g06712_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000035 1.1e-44 183.7 188 56.4
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 2.3e-42 176.0 103 80.6
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 5.6e-41 171.4 104 75.0
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 9.6e-41 170.6 104 76.0
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 9.6e-41 170.6 104 76.9
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 2.1e-40 169.5 102 77.5
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 2.8e-40 169.1 103 75.7
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 3.6e-40 168.7 103 74.8
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 8.1e-40 167.5 108 71.3
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 1.1e-39 167.2 104 76.0
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 1.4e-39 166.8 107 72.0
Atru.chr2.2823 Acer truncatum HOM05D001724 ORTHO05D007284 1.8e-39 166.4 104 75.0
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 1.8e-39 166.4 103 76.7
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 2.4e-39 166.0 104 74.0
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 2.4e-39 166.0 104 75.0
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 3.1e-39 165.6 102 75.5
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 3.1e-39 165.6 108 72.2
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 6.9e-39 164.5 103 73.8
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 1.2e-38 163.7 104 74.0
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 1.5e-38 163.3 103 74.8
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 1.5e-38 163.3 104 73.1
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 2.6e-38 162.5 104 74.0
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 2.6e-38 162.5 104 73.1
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 2.6e-38 162.5 104 76.0
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 4.4e-38 161.8 104 72.1
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 5.8e-38 161.4 104 73.1
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 5.8e-38 161.4 104 72.1
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 7.6e-38 161.0 103 76.7
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 9.9e-38 160.6 102 70.6
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 9.9e-38 160.6 103 74.8
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 1.7e-37 159.8 104 69.2
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 2.2e-37 159.5 103 71.8
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 2.2e-37 159.5 104 72.1
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 2.9e-37 159.1 104 70.2
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 2.9e-37 159.1 104 70.2
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 2.9e-37 159.1 104 70.2
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 2.9e-37 159.1 103 69.9
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 2.9e-37 159.1 103 71.8
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 6.4e-37 157.9 104 70.2
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 6.4e-37 157.9 104 69.2
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 6.4e-37 157.9 104 70.2
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 6.4e-37 157.9 104 70.2
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 6.4e-37 157.9 103 69.9
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 8.4e-37 157.5 104 70.2
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 8.4e-37 157.5 104 70.2
HPP92_018204 Vanilla planifolia HOM05D001724 ORTHO05D007284 8.4e-37 157.5 103 70.9
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 1.1e-36 157.1 104 70.2
Nitab4.5_0010137g0010 Nicotiana tabacum HOM05D001724 ORTHO05D007284 1.1e-36 157.1 103 70.9
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 1.1e-36 157.1 103 71.8
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 1.4e-36 156.8 104 70.2
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 1.4e-36 156.8 104 69.2
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 2.4e-36 156.0 104 73.1
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 2.4e-36 156.0 103 69.9
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 2.4e-36 156.0 104 72.1
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 2.4e-36 156.0 104 71.2
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 3.2e-36 155.6 104 69.2
AUR62036465 Chenopodium quinoa HOM05D001724 ORTHO05D007284 4.2e-36 155.2 103 69.9
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 4.2e-36 155.2 100 72.0
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 5.4e-36 154.8 104 69.2
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 7.1e-36 154.5 103 68.9
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 9.3e-36 154.1 104 68.3
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 9.3e-36 154.1 104 66.3
unitig_746.g26709 Utricularia gibba HOM05D001724 ORTHO05D007284 9.3e-36 154.1 102 69.6
FAN16G2293 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.2e-35 153.7 104 69.2
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 1.2e-35 153.7 103 68.0
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 1.2e-35 153.7 103 68.9
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 1.6e-35 153.3 103 68.0
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 4.6e-35 151.8 103 68.9
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 6.0e-35 151.4 103 68.9
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 7.8e-35 151.0 104 67.3
Glyma.14G013102 Glycine max HOM05D001724 ORTHO05D007284 7.8e-35 151.0 104 69.2
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 7.8e-35 151.0 102 71.6
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 1.3e-34 150.2 104 69.2
Os09g0477900 Oryza sativa ssp. japonica HOM05D001724 ORTHO05D007284 1.7e-34 149.8 104 66.3
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 5.1e-34 148.3 99 69.7
CARHR087770 Cardamine hirsuta HOM05D001724 ORTHO05D007284 6.6e-34 147.9 102 68.6
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 8.7e-34 147.5 87 77.0
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 1.5e-33 146.7 104 68.3
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 4.3e-33 145.2 103 67.0
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 5.6e-33 144.8 104 65.4
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 1.6e-32 143.3 102 68.6
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 6.2e-32 141.4 101 67.3
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 4.0e-31 138.7 102 63.7
CAN.G325.3 Capsicum annuum HOM05D001724 ORTHO05D007284 1.2e-30 137.1 91 69.2
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 1.2e-30 137.1 102 60.8
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 2.0e-30 136.3 103 65.0
A02p30970 Brassica napus HOM05D001724 ORTHO05D007284 4.9e-29 131.7 105 61.0
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 2.7e-27 125.9 100 58.0
Mapoly0080s0050 Marchantia polymorpha HOM05D001724 ORTHO05D007284 3.5e-27 125.6 100 58.0
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 6.0e-27 124.8 105 55.2
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis HOM05D001724 ORTHO05D007284 1.5e-25 120.2 100 52.0
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.5e-25 120.2 119 47.1
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 2.5e-25 119.4 72 79.2
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 9.6e-25 117.5 100 52.0
C08p11210 Brassica napus HOM05D001724 ORTHO05D007284 1.3e-21 107.1 105 49.5
BcaC07g38372 Brassica carinata HOM05D001724 ORTHO05D007284 2.5e-20 102.8 72 63.9
BolC8t48798H Brassica oleracea HOM05D001724 ORTHO05D007284 2.5e-20 102.8 72 63.9
FvH4_3g43190 Fragaria vesca HOM05D001724 ORTHO05D007284 4.2e-20 102.1 60 78.3
C06p32310 Brassica napus HOM05D001724 ORTHO05D007284 2.7e-19 99.4 113 45.1
BcaC02g09300 Brassica carinata HOM05D001724 ORTHO05D007284 6.0e-19 98.2 104 49.0
Cre50.g761447 Chlamydomonas reinhardtii HOM05D001724 ORTHO05D007284 7.9e-19 97.8 126 43.7
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 5.3e-15 85.1 51 78.4
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 1.0e-13 80.9 105 43.8
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 1.3e-13 80.5 60 60.0
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 2.2e-13 79.7 48 75.0
Oeu049377.1 Olea europaea HOM05D001724 ORTHO05D007284 1.2e-11 73.9 68 57.4
PRCOL_00005632 Prasinoderma coloniale HOM05D001724 ORTHO05D007284 1.3e-10 70.5 75 48.0
BolC6t38353H Brassica oleracea HOM05D001724 ORTHO05D007284 1.5e-09 67.0 87 41.4
BraA02t08108Z Brassica rapa HOM05D001724 ORTHO05D007284 2.6e-06 56.2 46 56.5


User provided reference genes

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