Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g25881_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 5.0e-60 234.2 113 100.0
MBI14_g40314_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 9.4e-59 229.9 112 99.1
MBI14_g06712_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000035 4.5e-45 184.5 189 56.1
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 6.5e-44 180.6 103 81.6
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 1.6e-42 176.0 104 76.0
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 2.7e-42 175.3 104 76.9
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 2.7e-42 175.3 104 77.9
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 6.1e-42 174.1 102 78.4
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 8.0e-42 173.7 103 76.7
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 1.0e-41 173.3 103 75.7
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 1.4e-41 172.9 108 72.2
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 3.0e-41 171.8 107 72.9
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 3.0e-41 171.8 104 76.9
Atru.chr2.2823 Acer truncatum HOM05D001724 ORTHO05D007284 5.2e-41 171.0 104 76.0
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 5.2e-41 171.0 103 77.7
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 6.8e-41 170.6 104 75.0
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 8.8e-41 170.2 102 76.5
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 2.0e-40 169.1 103 74.8
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 3.4e-40 168.3 104 75.0
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 4.4e-40 167.9 103 75.7
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 4.4e-40 167.9 104 74.0
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 5.7e-40 167.5 108 72.2
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 7.5e-40 167.2 104 75.0
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 7.5e-40 167.2 104 76.9
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 9.8e-40 166.8 104 75.0
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 1.3e-39 166.4 104 73.1
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 1.7e-39 166.0 104 74.0
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 1.7e-39 166.0 104 73.1
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 2.2e-39 165.6 103 77.7
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 2.8e-39 165.2 103 75.7
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 4.8e-39 164.5 104 70.2
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 6.3e-39 164.1 103 72.8
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 6.3e-39 164.1 104 73.1
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 8.3e-39 163.7 104 71.2
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 8.3e-39 163.7 104 71.2
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 8.3e-39 163.7 104 71.2
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 8.3e-39 163.7 104 73.1
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 8.3e-39 163.7 103 70.9
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 8.3e-39 163.7 103 72.8
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 1.8e-38 162.5 104 71.2
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.8e-38 162.5 104 70.2
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 1.8e-38 162.5 104 71.2
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 1.8e-38 162.5 104 71.2
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 1.8e-38 162.5 103 70.9
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 2.4e-38 162.2 104 71.2
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 2.4e-38 162.2 104 71.2
HPP92_018204 Vanilla planifolia HOM05D001724 ORTHO05D007284 2.4e-38 162.2 103 71.8
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 3.1e-38 161.8 104 71.2
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 3.1e-38 161.8 102 70.6
Nitab4.5_0010137g0010 Nicotiana tabacum HOM05D001724 ORTHO05D007284 3.1e-38 161.8 103 71.8
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 3.1e-38 161.8 103 72.8
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 4.1e-38 161.4 104 71.2
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 4.1e-38 161.4 104 70.2
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 7.0e-38 160.6 104 74.0
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 7.0e-38 160.6 103 70.9
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 7.0e-38 160.6 104 73.1
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 7.0e-38 160.6 104 72.1
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 9.1e-38 160.2 104 70.2
AUR62036465 Chenopodium quinoa HOM05D001724 ORTHO05D007284 1.2e-37 159.8 103 70.9
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 1.6e-37 159.5 104 70.2
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 1.6e-37 159.5 100 73.0
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 2.0e-37 159.1 103 69.9
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 2.7e-37 158.7 104 69.2
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 2.7e-37 158.7 104 67.3
unitig_746.g26709 Utricularia gibba HOM05D001724 ORTHO05D007284 2.7e-37 158.7 102 70.6
FAN16G2293 Fragaria x ananassa HOM05D001724 ORTHO05D007284 3.5e-37 158.3 104 70.2
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 3.5e-37 158.3 103 68.9
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 3.5e-37 158.3 103 69.9
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 4.5e-37 157.9 103 68.9
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 1.3e-36 156.4 103 69.9
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 2.2e-36 155.6 104 68.3
Glyma.14G013102 Glycine max HOM05D001724 ORTHO05D007284 2.2e-36 155.6 104 70.2
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 2.2e-36 155.6 102 72.5
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 3.8e-36 154.8 104 70.2
Os09g0477900 Oryza sativa ssp. japonica HOM05D001724 ORTHO05D007284 5.0e-36 154.5 104 67.3
CARHR087770 Cardamine hirsuta HOM05D001724 ORTHO05D007284 1.9e-35 152.5 102 69.6
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 1.9e-35 152.5 103 68.9
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 1.9e-35 152.5 99 70.7
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 5.5e-35 151.0 87 78.2
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 1.2e-34 149.8 103 68.0
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 1.6e-34 149.4 104 66.3
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 4.7e-34 147.9 104 68.3
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 4.7e-34 147.9 102 69.6
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 2.3e-33 145.6 101 68.3
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 1.2e-32 143.3 102 64.7
CAN.G325.3 Capsicum annuum HOM05D001724 ORTHO05D007284 3.4e-32 141.7 91 70.3
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 6.3e-31 137.5 102 60.8
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 8.3e-31 137.1 103 65.0
A02p30970 Brassica napus HOM05D001724 ORTHO05D007284 1.4e-30 136.3 105 61.9
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 1.0e-28 130.2 100 59.0
Mapoly0080s0050 Marchantia polymorpha HOM05D001724 ORTHO05D007284 1.3e-28 129.8 100 59.0
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 2.5e-27 125.6 105 55.2
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 1.2e-26 123.2 72 80.6
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis HOM05D001724 ORTHO05D007284 8.0e-26 120.6 100 52.0
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.8e-25 119.4 111 48.6
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 4.0e-25 118.2 100 52.0
C08p11210 Brassica napus HOM05D001724 ORTHO05D007284 3.7e-23 111.7 105 50.5
BcaC07g38372 Brassica carinata HOM05D001724 ORTHO05D007284 7.0e-22 107.5 72 65.3
BolC8t48798H Brassica oleracea HOM05D001724 ORTHO05D007284 7.0e-22 107.5 72 65.3
FvH4_3g43190 Fragaria vesca HOM05D001724 ORTHO05D007284 4.6e-21 104.8 61 78.7
C06p32310 Brassica napus HOM05D001724 ORTHO05D007284 1.3e-20 103.2 113 46.0
BcaC02g09300 Brassica carinata HOM05D001724 ORTHO05D007284 1.7e-20 102.8 104 50.0
Cre50.g761447 Chlamydomonas reinhardtii HOM05D001724 ORTHO05D007284 3.0e-20 102.1 126 44.4
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 3.7e-15 85.1 60 61.7
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 3.7e-15 85.1 51 78.4
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 3.7e-15 85.1 105 44.8
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 1.1e-14 83.6 48 77.1
Oeu049377.1 Olea europaea HOM05D001724 ORTHO05D007284 6.0e-13 77.8 68 58.8
PRCOL_00005632 Prasinoderma coloniale HOM05D001724 ORTHO05D007284 9.5e-11 70.5 75 48.0
BolC6t38353H Brassica oleracea HOM05D001724 ORTHO05D007284 1.6e-10 69.7 87 42.5
BraA02t08108Z Brassica rapa HOM05D001724 ORTHO05D007284 1.7e-07 59.7 46 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4862 Anthoceros agrestis HOM05D006825 ORTHO05D008510 7.1e-06 54.3 96 36.5


User provided reference genes

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