Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI06_g44498_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 4.2e-192 674.5 333 100.0
MBI06_g04552_MAGBIO Magnolia biondii HOM05D002121 ORTHO05D008891 4.1e-86 322.4 203 82.3
TAR376G0507 Trochodendron aralioides HOM05D002121 ORTHO05D008891 3.3e-59 233.0 182 64.8
Gorai.009G248000 Gossypium raimondii HOM05D002121 ORTHO05D008891 1.2e-58 231.1 224 55.8
Nn1g08892 Nelumbo nucifera HOM05D002121 ORTHO05D008891 2.1e-58 230.3 254 53.9
Gohir.D05G239200 Gossypium hirsutum HOM05D002121 ORTHO05D008891 1.8e-57 227.3 200 59.0
COL.COLO4_37918 Corchorus olitorius HOM05D002121 ORTHO05D008891 5.2e-57 225.7 192 60.9
Thecc.08G129600 Theobroma cacao HOM05D002121 ORTHO05D008891 7.5e-56 221.9 174 63.2
Gohir.A05G237100 Gossypium hirsutum HOM05D002121 ORTHO05D008891 9.8e-56 221.5 194 59.3
Ciclev10001657m.g Citrus clementina HOM05D002121 ORTHO05D008891 1.7e-55 220.7 209 53.6
Manes.02G166400 Manihot esculenta HOM05D002121 ORTHO05D008891 3.7e-55 219.5 220 54.1
Duzib093G0305 Durio zibethinus HOM05D002121 ORTHO05D008891 4.9e-55 219.2 213 55.4
RcHm_v2.0_Chr6g0296321 Rosa chinensis HOM05D002121 ORTHO05D008891 4.9e-55 219.2 207 57.5
Prupe.1G492700 Prunus persica HOM05D002121 ORTHO05D008891 1.1e-54 218.0 243 50.6
CANSAT25G1674 Cannabis sativa HOM05D002121 ORTHO05D008891 1.9e-54 217.2 162 63.6
Actinidia03419 Actinidia chinensis HOM05D002121 ORTHO05D008891 2.4e-54 216.9 244 54.5
FAN20G0023 Fragaria x ananassa HOM05D002121 ORTHO05D008891 1.2e-53 214.5 226 53.5
PGSC0003DMG400009246 Solanum tuberosum HOM05D002121 ORTHO05D008891 1.2e-53 214.5 218 54.1
DCAR_014379 Daucus carota HOM05D001700 ORTHO05D002131 1.6e-53 214.2 211 56.9
Hund17311 Selenicereus undatus HOM05D002121 ORTHO05D008891 1.6e-53 214.2 235 52.8
FvH4_2g27490 Fragaria vesca HOM05D002121 ORTHO05D008891 2.7e-53 213.4 207 54.6
FAN15G1848 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-53 213.4 207 54.6
FAN24G0685 Fragaria x ananassa HOM05D002121 ORTHO05D008891 2.7e-53 213.4 207 54.6
Solyc11g018510.2 Solanum lycopersicum HOM05D002121 ORTHO05D008891 3.5e-53 213.0 230 51.3
Haze_17516 Corylus avellana HOM05D002121 ORTHO05D008891 4.6e-53 212.6 205 54.6
DCAR_002302 Daucus carota HOM05D002121 ORTHO05D008891 4.6e-53 212.6 211 56.9
Aqoxy6G00263 Aquilegia oxysepala HOM05D002121 ORTHO05D008891 6.0e-53 212.2 218 52.8
Sopen11g009470 Solanum pennellii HOM05D002121 ORTHO05D008891 6.0e-53 212.2 232 50.9
Dinv27282 Davidia involucrata HOM05D002121 ORTHO05D008891 1.3e-52 211.1 200 57.5
THA.LOC104800213 Tarenaya hassleriana HOM05D002121 ORTHO05D008891 1.3e-52 211.1 159 64.8
arahy.Tifrunner.gnm1.ann1.VL2KU3 Arachis hypogaea HOM05D002121 ORTHO05D008891 1.7e-52 210.7 206 54.9
CDE08G1413 Ceratophyllum demersum HOM05D002121 ORTHO05D008891 3.0e-52 209.9 207 51.2
Cc10_g12290 Coffea canephora HOM05D002121 ORTHO05D008891 3.0e-52 209.9 241 49.8
FAN27G1590 Fragaria x ananassa HOM05D002121 ORTHO05D008891 5.1e-52 209.1 207 55.1
Atru.chr13.1527 Acer truncatum HOM05D002121 ORTHO05D008891 6.6e-52 208.8 176 61.9
Migut.C01114 Erythranthe guttata HOM05D002121 ORTHO05D008891 1.1e-51 208.0 216 52.8
Medtr3g088510 Medicago truncatula HOM05D002121 ORTHO05D008891 1.5e-51 207.6 211 52.6
Potri.005G180700 Populus trichocarpa HOM05D002121 ORTHO05D008891 1.5e-51 207.6 162 60.5
ATR0709G083 Amborella trichopoda HOM05D002121 ORTHO05D008891 1.9e-51 207.2 193 56.5
Nitab4.5_0000111g0140 Nicotiana tabacum HOM05D002121 ORTHO05D008891 1.9e-51 207.2 234 52.1
QL09p033741 Quercus lobata HOM05D002121 ORTHO05D008891 1.9e-51 207.2 193 56.0
SGA_v2.0_scaffold52G18936 Striga asiatica HOM05D002121 ORTHO05D008891 1.9e-51 207.2 230 49.1
Lalb_Chr23g0271121 Lupinus albus HOM05D002121 ORTHO05D008891 2.5e-51 206.8 199 55.3
vmacro00852 Vaccinium macrocarpon HOM05D002121 ORTHO05D008891 2.5e-51 206.8 240 50.0
arahy.Tifrunner.gnm1.ann1.IC0JL2 Arachis hypogaea HOM05D002121 ORTHO05D008891 4.3e-51 206.1 201 55.2
Phvul.009G127600 Phaseolus vulgaris HOM05D002121 ORTHO05D008891 4.3e-51 206.1 219 50.7
MSTRG.25368 Avicennia marina HOM05D002121 ORTHO05D008891 5.6e-51 205.7 208 53.8
Ah.05g171490 Amaranthus hybridus HOM05D002121 ORTHO05D008891 9.5e-51 204.9 214 53.3
Glyma.06G115500 Glycine max HOM05D002121 ORTHO05D008891 9.5e-51 204.9 215 51.2
Lj7A344T50 Lonicera japonica HOM05D002121 ORTHO05D008891 9.5e-51 204.9 214 56.5
PSO170G0582 Papaver somniferum HOM05D002121 ORTHO05D008891 2.1e-50 203.8 217 53.0
CiPaw.15G034100 Carya illinoinensis HOM05D002121 ORTHO05D008891 3.6e-50 203.0 216 53.7
AUR62002267 Chenopodium quinoa HOM05D002121 ORTHO05D008891 3.6e-50 203.0 268 47.0
Ca_16577_v3 Cicer arietinum L. HOM05D002121 ORTHO05D008891 3.6e-50 203.0 212 53.8
MELO3C010637.2 Cucumis melo HOM05D002121 ORTHO05D008891 3.6e-50 203.0 195 57.9
Hma1.2p1_0612F.1_g188790 Hydrangea macrophylla HOM05D002121 ORTHO05D008891 4.7e-50 202.6 161 60.2
Lj1g0016880 Lotus japonicus HOM05D002121 ORTHO05D008891 8.1e-50 201.8 210 53.3
Rhsim11G0070100 Rhododendron simsii HOM05D002121 ORTHO05D008891 1.1e-49 201.4 196 56.6
CsaV3_6G034200 Cucumis sativus L. HOM05D002121 ORTHO05D008891 1.4e-49 201.1 197 57.9
Psat5g086080 Pisum sativum HOM05D002121 ORTHO05D008891 1.4e-49 201.1 173 61.3
ClCG08G005910 Citrullus lanatus HOM05D002121 ORTHO05D008891 1.8e-49 200.7 198 57.1
Cpa.g.sc64.123 Carica papaya HOM05D002121 ORTHO05D008891 3.1e-49 199.9 170 60.6
VMungo1309G2347 Vigna mungo HOM05D002121 ORTHO05D008891 4.0e-49 199.5 173 56.6
Lsat_1_v5_gn_6_97640 Lactuca sativa HOM05D002121 ORTHO05D008891 5.2e-49 199.1 180 58.3
Peaxi162Scf00310g00513 Petunia axillaris HOM05D002121 ORTHO05D008891 5.2e-49 199.1 228 52.2
CAN.G1391.3 Capsicum annuum HOM05D002121 ORTHO05D008891 8.9e-49 198.4 231 48.9
Eucgr.F03811 Eucalyptus grandis HOM05D002121 ORTHO05D008891 1.5e-48 197.6 216 53.2
EL10Ac1g00004 Beta vulgaris HOM05D002121 ORTHO05D008891 2.0e-48 197.2 207 52.7
BcaB07g32168 Brassica carinata HOM05D002121 ORTHO05D008891 2.6e-48 196.8 173 56.1
TWI32G0996 Tripterygium wilfordii HOM05D002121 ORTHO05D008891 5.8e-48 195.7 210 51.9
Aa31LG7G5680 Aethionema arabicum HOM05D002121 ORTHO05D008891 7.6e-48 195.3 206 52.4
CARHR022070 Cardamine hirsuta HOM05D002121 ORTHO05D008891 1.7e-47 194.1 203 52.2
Sc15g0002960 Simmondsia chinensis HOM05D002121 ORTHO05D008891 4.9e-47 192.6 151 64.2
Sc15g0002990 Simmondsia chinensis HOM05D002121 ORTHO05D008891 4.9e-47 192.6 151 64.2
Thhalv10008051m.g Eutrema salsugineum HOM05D002121 ORTHO05D008891 8.3e-47 191.8 194 52.1
BcaB03g12775 Brassica carinata HOM05D002121 ORTHO05D008891 1.4e-46 191.0 202 51.0
HPP92_011391 Vanilla planifolia HOM05D002121 ORTHO05D008891 2.4e-46 190.3 232 48.7
BcaC05g26090 Brassica carinata HOM05D002121 ORTHO05D008891 3.2e-46 189.9 202 51.0
C05p20690 Brassica napus HOM05D002121 ORTHO05D004000 4.1e-46 189.5 202 51.5
BolC5t30768H Brassica oleracea HOM05D002121 ORTHO05D004000 4.1e-46 189.5 202 51.5
HanXRQChr05g0148721 Helianthus annuus HOM05D002121 ORTHO05D008891 4.1e-46 189.5 209 50.7
CSS0024419 Camellia sinensis var. sinensis HOM05D002121 ORTHO05D008891 1.2e-45 188.0 228 47.8
AT1G21710 Arabidopsis thaliana HOM05D002121 ORTHO05D008891 1.6e-45 187.6 201 50.7
Carub.0001s2115 Capsella rubella HOM05D002121 ORTHO05D008891 4.6e-45 186.0 202 50.5
A06p17800 Brassica napus HOM05D002121 ORTHO05D004000 6.0e-45 185.7 203 50.7
BraA06t24872Z Brassica rapa HOM05D002121 ORTHO05D008891 6.0e-45 185.7 203 50.7
Sp1g19270 Schrenkiella parvula HOM05D002121 ORTHO05D008891 1.0e-44 184.9 202 50.0
AL1G34880 Arabidopsis lyrata HOM05D002121 ORTHO05D008891 1.3e-44 184.5 199 49.7
Sed0022381 Sechium edule HOM05D002121 ORTHO05D008891 9.6e-43 178.3 219 48.4
SEGI_00220 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.4e-41 174.5 184 48.9
SEGI_39313 Sequoiadendron giganteum HOM05D002121 ORTHO05D008891 1.4e-41 174.5 184 48.9
Zm00001eb243580 Zea mays HOM05D002121 ORTHO05D008891 1.4e-41 174.5 218 46.3
Os02g0552600 Oryza sativa ssp. japonica HOM05D002121 ORTHO05D008891 7.6e-40 168.7 169 49.7
Mapoly0066s0098 Marchantia polymorpha HOM05D002121 ORTHO05D008891 1.1e-38 164.9 197 45.2
Pp3c15_7530 Physcomitrium patens HOM05D002121 ORTHO05D008891 1.6e-37 161.0 164 48.8
CAN.G1347.2 Capsicum annuum HOM05D002121 ORTHO05D008891 3.1e-33 146.7 237 43.0
SMO367G0241 Selaginella moellendorffii HOM05D002121 ORTHO05D008891 5.3e-33 146.0 159 47.2
AagrBONN_evm.TU.Sc2ySwM_228.2791 Anthoceros agrestis HOM05D002121 ORTHO05D008891 4.9e-31 139.4 176 42.0
Dinv14647 Davidia involucrata HOM05D002121 ORTHO05D008891 1.2e-29 134.8 103 62.1
Migut.C00404 Erythranthe guttata HOM05D002121 ORTHO05D008891 5.6e-27 125.9 101 60.4
MCO08G296 Micromonas commoda HOM05D002121 ORTHO05D008891 2.0e-24 117.5 173 40.5
Sabra05G0136700 Salix brachista HOM05D002121 ORTHO05D008891 1.1e-22 111.7 73 67.1
RcHm_v2.0_Chr2g0118881 Rosa chinensis HOM05D002121 ORTHO05D008891 5.4e-22 109.4 80 63.8
Cre01.g063632 Chlamydomonas reinhardtii HOM05D002121 ORTHO05D008891 4.3e-19 99.8 198 33.3
AUR62015427 Chenopodium quinoa HOM05D002121 ORTHO05D008891 3.8e-15 86.7 145 40.7
unitig_699.g19768 Utricularia gibba HOM05D002121 ORTHO05D003088 1.0e-12 78.6 117 39.3
CBR_g3761 Chara braunii HOM05D002121 ORTHO05D008891 5.1e-12 76.3 198 28.8
PRCOL_00001975 Prasinoderma coloniale HOM05D002121 ORTHO05D008891 6.5e-07 59.3 207 28.5


User provided reference genes

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