Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI04_g44620_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 9.1e-136 486.9 241 100.0
MBI04_g21739_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 1.1e-96 357.1 214 86.9
CDE11G1040 Ceratophyllum demersum HOM05D006305 ORTHO05D007984 6.4e-73 278.1 212 66.5
TWI56G0624 Tripterygium wilfordii HOM05D006305 ORTHO05D007984 2.4e-72 276.2 230 62.2
ClCG08G002270 Citrullus lanatus HOM05D006305 ORTHO05D007984 3.2e-72 275.8 215 65.6
QL03p004578 Quercus lobata HOM05D006305 ORTHO05D007984 1.2e-71 273.9 214 67.8
CANSAT54G0217 Cannabis sativa HOM05D006305 ORTHO05D007984 2.1e-71 273.1 216 67.1
Prupe.6G329400 Prunus persica HOM05D006305 ORTHO05D007984 4.6e-71 271.9 212 66.0
TAR636G3548 Trochodendron aralioides HOM05D006305 ORTHO05D007984 4.6e-71 271.9 211 68.2
MD04G1208500 Malus domestica HOM05D006305 ORTHO05D007984 7.8e-71 271.2 212 67.9
Peaxi162Scf00274g00026 Petunia axillaris HOM05D006305 ORTHO05D007984 1.0e-70 270.8 203 68.0
CAN.G479.41 Capsicum annuum HOM05D006305 ORTHO05D007984 1.3e-70 270.4 215 66.5
Eucgr.H04470 Eucalyptus grandis HOM05D006305 ORTHO05D007984 1.7e-70 270.0 219 65.8
Nn3g18889 Nelumbo nucifera HOM05D006305 ORTHO05D007984 2.3e-70 269.6 140 91.4
SGA_v2.0_scaffold34G13953 Striga asiatica HOM05D006305 ORTHO05D007984 2.3e-70 269.6 140 92.1
Gorai.013G204500 Gossypium raimondii HOM05D006305 ORTHO05D007984 3.9e-70 268.9 235 62.6
Lsat_1_v5_gn_2_67520 Lactuca sativa HOM05D006305 ORTHO05D007984 5.1e-70 268.5 147 87.1
Hund21683 Selenicereus undatus HOM05D006305 ORTHO05D007984 5.1e-70 268.5 140 91.4
COL.COLO4_19840 Corchorus olitorius HOM05D006305 ORTHO05D007984 6.6e-70 268.1 140 90.7
CSS0018445 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.7e-70 267.7 212 66.5
CSS0021232 Camellia sinensis var. sinensis HOM05D006305 ORTHO05D007984 8.7e-70 267.7 212 66.5
AUR62005086 Chenopodium quinoa HOM05D006305 ORTHO05D007984 1.1e-69 267.3 140 91.4
ECA238G3439 Erigeron canadensis HOM05D006305 ORTHO05D007984 1.1e-69 267.3 140 91.4
HanXRQChr15g0472081 Helianthus annuus HOM05D006305 ORTHO05D007984 1.1e-69 267.3 140 91.4
Thecc.05G307300 Theobroma cacao HOM05D006305 ORTHO05D007984 1.1e-69 267.3 140 90.0
Rhsim05G0143900 Rhododendron simsii HOM05D006305 ORTHO05D007984 1.5e-69 266.9 214 66.4
Cc02_g33730 Coffea canephora HOM05D006305 ORTHO05D007984 1.9e-69 266.5 140 90.7
Gohir.A13G173500 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.9e-69 266.5 235 62.6
Gohir.D13G179200 Gossypium hirsutum HOM05D006305 ORTHO05D007984 1.9e-69 266.5 235 62.1
Solyc03g115580.4 Solanum lycopersicum HOM05D006305 ORTHO05D007984 1.9e-69 266.5 140 88.6
PGSC0003DMG400024658 Solanum tuberosum HOM05D006305 ORTHO05D007984 1.9e-69 266.5 140 88.6
BcaC05g30168 Brassica carinata HOM05D006305 ORTHO05D007984 2.5e-69 266.2 214 65.0
CiPaw.07G015100 Carya illinoinensis HOM05D006305 ORTHO05D007984 2.5e-69 266.2 214 64.5
FAN14G0751 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.5e-69 266.2 212 65.6
FAN14G5210 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.5e-69 266.2 212 65.6
Sopen03g034570 Solanum pennellii HOM05D006305 ORTHO05D007984 2.5e-69 266.2 140 88.6
FAN05G5097 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.3e-69 265.4 212 65.1
Lj5g0026498 Lotus japonicus HOM05D006305 ORTHO05D007984 4.3e-69 265.4 146 87.0
FvH4_6g05460 Fragaria vesca HOM05D006305 ORTHO05D007984 5.6e-69 265.0 212 65.6
ATR0620G066 Amborella trichopoda HOM05D006305 ORTHO05D007984 7.3e-69 264.6 140 89.3
VMungo0720G1654 Vigna mungo HOM05D006305 ORTHO05D007984 7.3e-69 264.6 140 90.7
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea HOM05D006305 ORTHO05D007984 9.6e-69 264.2 232 60.8
Cfa006552 Carpinus fangiana HOM05D006305 ORTHO05D007984 9.6e-69 264.2 143 88.1
AUR62000888 Chenopodium quinoa HOM05D006305 ORTHO05D007984 9.6e-69 264.2 140 90.0
SalBow6G6985 Salvia bowleyana HOM05D006305 ORTHO05D007984 1.3e-68 263.8 140 90.0
vmacro19639 Vaccinium macrocarpon HOM05D006305 ORTHO05D007984 1.3e-68 263.8 214 65.0
MELO3C025022.2 Cucumis melo HOM05D006305 ORTHO05D007984 1.6e-68 263.5 140 89.3
Lj9A683T26 Lonicera japonica HOM05D006305 ORTHO05D007984 1.6e-68 263.5 140 89.3
EL10Ac4g09328 Beta vulgaris HOM05D006305 ORTHO05D007984 2.1e-68 263.1 140 87.9
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 2.1e-68 263.1 140 89.3
PGR031G3204 Punica granatum HOM05D006305 ORTHO05D007984 2.1e-68 263.1 140 90.0
Ah.06g189130 Amaranthus hybridus HOM05D006305 ORTHO05D007984 2.8e-68 262.7 211 65.4
Thhalv10020823m.g Eutrema salsugineum HOM05D006305 ORTHO05D007984 2.8e-68 262.7 216 64.8
Glyma.10G156300 Glycine max HOM05D006305 ORTHO05D007984 2.8e-68 262.7 140 89.3
AL3G15630 Arabidopsis lyrata HOM05D006305 ORTHO05D007984 3.6e-68 262.3 216 63.9
Ciclev10001229m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-68 262.3 140 89.3
Os10g0518900 Oryza sativa ssp. japonica HOM05D006305 ORTHO05D007984 3.6e-68 262.3 214 64.5
Potri.005G036700 Populus trichocarpa HOM05D006305 ORTHO05D007984 3.6e-68 262.3 211 65.4
Ca_10097_v3 Cicer arietinum L. HOM05D006305 ORTHO05D007984 4.8e-68 261.9 140 88.6
Manes.09G164300 Manihot esculenta HOM05D006305 ORTHO05D007984 4.8e-68 261.9 140 88.6
GSVIVG01000016001 Vitis vinifera HOM05D006305 ORTHO05D007984 4.8e-68 261.9 211 66.8
Dinv23970 Davidia involucrata HOM05D006305 ORTHO05D007984 6.2e-68 261.5 140 89.3
Medtr1g082570 Medicago truncatula HOM05D006305 ORTHO05D007984 1.1e-67 260.8 218 64.2
Nitab4.5_0002756g0070 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.1e-67 260.8 147 85.0
Phvul.007G181700 Phaseolus vulgaris HOM05D006305 ORTHO05D007984 1.1e-67 260.8 140 89.3
BcaC05g30009 Brassica carinata HOM05D006305 ORTHO05D007984 1.4e-67 260.4 217 64.1
A05p42370 Brassica napus HOM05D006305 ORTHO05D007984 1.4e-67 260.4 140 87.9
C05p61980 Brassica napus HOM05D006305 ORTHO05D007984 1.4e-67 260.4 217 64.1
BolC5t34858H Brassica oleracea HOM05D006305 ORTHO05D007984 1.4e-67 260.4 140 87.9
BraA05t23013Z Brassica rapa HOM05D006305 ORTHO05D007984 1.4e-67 260.4 140 87.9
Sabra05G0037100 Salix brachista HOM05D006305 ORTHO05D007984 1.8e-67 260.0 213 64.3
Zm00001eb043410 Zea mays HOM05D006305 ORTHO05D007984 1.8e-67 260.0 221 61.5
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea HOM05D006305 ORTHO05D007984 2.4e-67 259.6 243 59.7
FAN05G0068 Fragaria x ananassa HOM05D006305 ORTHO05D007984 2.4e-67 259.6 140 86.4
Aqoxy5G04250 Aquilegia oxysepala HOM05D006305 ORTHO05D007984 3.1e-67 259.2 140 86.4
RcHm_v2.0_Chr3g0454231 Rosa chinensis HOM05D006305 ORTHO05D007984 3.1e-67 259.2 212 63.7
HPP92_015091 Vanilla planifolia HOM05D006305 ORTHO05D007984 3.1e-67 259.2 215 62.8
Carub.0003s0446 Capsella rubella HOM05D006305 ORTHO05D007984 4.0e-67 258.8 140 86.4
FAN02G0061 Fragaria x ananassa HOM05D006305 ORTHO05D007984 4.0e-67 258.8 139 87.1
Psat0ss6702g0320 Pisum sativum HOM05D006305 ORTHO05D007984 4.0e-67 258.8 140 87.1
Atru.chr2.472 Acer truncatum HOM05D006305 ORTHO05D007984 9.0e-67 257.7 140 86.4
DCAR_029432 Daucus carota HOM05D006305 ORTHO05D007984 9.0e-67 257.7 140 86.4
Sp3g04060 Schrenkiella parvula HOM05D006305 ORTHO05D007984 9.0e-67 257.7 206 65.0
CsaV3_6G002610 Cucumis sativus L. HOM05D006305 ORTHO05D007984 1.2e-66 257.3 138 87.7
Migut.F01514 Erythranthe guttata HOM05D006305 ORTHO05D007984 1.2e-66 257.3 140 87.9
Aa31LG5G15590 Aethionema arabicum HOM05D006305 ORTHO05D007984 1.5e-66 256.9 210 64.8
MSTRG.306 Avicennia marina HOM05D006305 ORTHO05D007984 2.0e-66 256.5 211 66.4
Lalb_Chr02g0148341 Lupinus albus HOM05D006305 ORTHO05D007984 2.0e-66 256.5 140 87.9
unitig_746.g26625 Utricularia gibba HOM05D006305 ORTHO05D007984 4.4e-66 255.4 140 85.0
Sed0018566 Sechium edule HOM05D006305 ORTHO05D007984 2.9e-65 252.7 138 86.2
TPR.G22794 Trifolium pratense HOM05D006305 ORTHO05D007984 2.9e-65 252.7 135 88.9
PSO782G4398 Papaver somniferum HOM05D006305 ORTHO05D007984 8.4e-65 251.1 136 86.8
Ciclev10002028m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.7e-63 246.1 168 73.8
BcaC05g30019 Brassica carinata HOM05D006305 ORTHO05D007984 1.0e-62 244.2 209 62.7
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla HOM05D006305 ORTHO05D007984 3.9e-62 242.3 140 84.3
SMO146G0211 Selaginella moellendorffii HOM05D006305 ORTHO05D007984 6.6e-62 241.5 140 82.1
Mapoly0128s0010 Marchantia polymorpha HOM05D006305 ORTHO05D007984 8.1e-60 234.6 241 55.2
Pp3c6_29610 Physcomitrium patens HOM05D006305 ORTHO05D007984 1.8e-59 233.4 140 78.6
CBR_g4857 Chara braunii HOM05D006305 ORTHO05D007984 1.3e-57 227.3 146 74.7
THA.LOC104820089 Tarenaya hassleriana HOM05D006305 ORTHO05D007984 2.7e-55 219.5 153 72.5
AT3G05210 Arabidopsis thaliana HOM05D006305 ORTHO05D007984 3.9e-54 215.7 117 85.5
Duzib106G1918 Durio zibethinus HOM05D006305 ORTHO05D007984 3.4e-50 202.6 199 57.3
PSO063G7033 Papaver somniferum HOM05D006305 ORTHO05D007984 2.2e-49 199.9 140 73.6
Haze_04230 Corylus avellana HOM05D006305 ORTHO05D007984 2.5e-48 196.4 179 61.5
Cpa.g.sc1183.2 Carica papaya HOM05D006305 ORTHO05D007984 1.6e-47 193.7 106 85.8
MBI04_g33407_MAGBIO Magnolia biondii HOM05D006305 ORTHO05D007984 3.5e-47 192.6 97 99.0
Sc16g0008400 Simmondsia chinensis HOM05D006305 ORTHO05D007984 2.8e-44 183.0 95 88.4
Ciclev10003828m.g Citrus clementina HOM05D006305 ORTHO05D007984 2.4e-43 179.9 142 64.8
CARHR079550 Cardamine hirsuta HOM05D006305 ORTHO05D007984 2.0e-42 176.8 94 86.2
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis HOM05D006305 ORTHO05D007984 6.1e-39 165.2 93 78.5
Cre03.g196651 Chlamydomonas reinhardtii HOM05D006305 ORTHO05D007984 7.9e-39 164.9 142 58.5
Nitab4.5_0001211g0080 Nicotiana tabacum HOM05D006305 ORTHO05D007984 1.2e-31 141.0 91 76.9
PRCOL_00003423 Prasinoderma coloniale HOM05D006305 ORTHO05D007984 8.5e-25 118.2 140 43.6
Ciclev10003460m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.6e-23 112.8 67 82.1
Cfa026476 Carpinus fangiana HOM05D006305 ORTHO05D007984 3.0e-22 109.8 140 38.6
Ciclev10003373m.g Citrus clementina HOM05D006305 ORTHO05D007984 3.0e-22 109.8 111 57.7
MCO01G606 Micromonas commoda HOM05D006305 ORTHO05D007984 1.3e-20 104.4 156 37.8
Glyma.20G232002 Glycine max HOM05D006305 ORTHO05D007984 8.5e-09 65.1 41 80.5


User provided reference genes

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