Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI03_g02276_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.6e-80 302.0 150 100.0
MBI15_g00867_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 5.4e-62 241.1 150 84.7
MBI14_g46623_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 6.0e-53 211.1 148 77.0
MBI04_g09509_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D002980 5.6e-51 204.5 154 74.0
MBI16_g24355_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 9.6e-51 203.8 149 74.5
MBI18_g40791_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.2e-50 203.4 151 73.5
MBI17_g44285_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.6e-50 203.0 148 75.7
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.8e-50 202.2 148 75.7
MBI14_g36712_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.5e-48 196.4 163 69.9
TAR374G0935 Trochodendron aralioides HOM05D001670 ORTHO05D002980 1.8e-33 146.4 148 54.7
TAR629G1646 Trochodendron aralioides HOM05D001670 ORTHO05D002980 4.0e-33 145.2 148 54.7
TAR375G0686 Trochodendron aralioides HOM05D001670 ORTHO05D002980 9.3e-30 134.0 148 48.6
Atru.chr1.760 Acer truncatum HOM05D001670 ORTHO05D002980 1.6e-29 133.3 154 46.8
GSVIVG01018721001 Vitis vinifera HOM05D001670 ORTHO05D002980 3.5e-29 132.1 159 46.5
Nn6g33938 Nelumbo nucifera HOM05D001670 ORTHO05D002980 1.8e-28 129.8 154 46.8
Dinv06565 Davidia involucrata HOM05D001670 ORTHO05D002980 2.1e-26 122.9 143 49.0
Potri.002G143000 Populus trichocarpa HOM05D001670 ORTHO05D002980 8.2e-26 120.9 142 40.8
Prupe.2G135900 Prunus persica HOM05D001670 ORTHO05D002980 1.4e-25 120.2 141 44.7
Rhsim03G0166300 Rhododendron simsii HOM05D001670 ORTHO05D002980 1.8e-25 119.8 150 41.3
Aqoxy6G02523 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 3.1e-25 119.0 150 46.7
Dinv44111 Davidia involucrata HOM05D001670 ORTHO05D002980 4.0e-25 118.6 140 47.1
Manes.01G270100 Manihot esculenta HOM05D001670 ORTHO05D002980 4.0e-25 118.6 142 41.5
Aqoxy7G00778 Aquilegia oxysepala HOM05D001670 ORTHO05D002980 5.3e-25 118.2 150 45.3
Cfa011137 Carpinus fangiana HOM05D001670 ORTHO05D002980 5.3e-25 118.2 142 41.5
Potri.014G058800 Populus trichocarpa HOM05D001670 ORTHO05D002980 9.0e-25 117.5 142 42.3
Atru.chr5.219 Acer truncatum HOM05D001670 ORTHO05D002980 1.5e-24 116.7 142 42.3
Haze_02723 Corylus avellana HOM05D001670 ORTHO05D002980 1.5e-24 116.7 148 41.2
PSO170G5961 Papaver somniferum HOM05D001670 ORTHO05D002980 1.5e-24 116.7 144 45.1
Manes.05G050200 Manihot esculenta HOM05D001670 ORTHO05D002980 2.0e-24 116.3 142 39.4
QL04p035871 Quercus lobata HOM05D001670 ORTHO05D002980 2.0e-24 116.3 148 41.2
Sabra02G0111500 Salix brachista HOM05D001670 ORTHO05D002980 2.6e-24 115.9 142 40.8
PSO017G3667 Papaver somniferum HOM05D001670 ORTHO05D002980 4.5e-24 115.2 144 47.2
ClCG05G000260 Citrullus lanatus HOM05D001670 ORTHO05D002980 5.8e-24 114.8 142 43.7
Ciclev10018430m.g Citrus clementina HOM05D001670 ORTHO05D002980 5.8e-24 114.8 142 42.3
CANSAT21G0618 Cannabis sativa HOM05D001670 ORTHO05D002980 7.6e-24 114.4 142 43.0
MD07G1112500 Malus domestica HOM05D001670 ORTHO05D002980 7.6e-24 114.4 141 41.8
RcHm_v2.0_Chr1g0348711 Rosa chinensis HOM05D001670 ORTHO05D002980 1.0e-23 114.0 143 43.4
Hund27384 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.3e-23 113.6 133 45.1
CsaV3_3G007410 Cucumis sativus L. HOM05D001670 ORTHO05D002980 1.7e-23 113.2 146 42.5
Medtr8g005820 Medicago truncatula HOM05D001670 ORTHO05D002980 1.7e-23 113.2 143 42.0
FAN03G2300 Fragaria x ananassa HOM05D001670 ORTHO05D002980 3.8e-23 112.1 143 44.8
EL10Ac1g00822 Beta vulgaris HOM05D001670 ORTHO05D002980 4.9e-23 111.7 142 42.3
FvH4_7g10770 Fragaria vesca HOM05D001670 ORTHO05D002980 4.9e-23 111.7 143 42.7
FAN06G0311 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.9e-23 111.7 143 42.7
FAN06G1683 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.9e-23 111.7 143 42.7
FAN10G0390 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.9e-23 111.7 143 42.7
FAN10G2564 Fragaria x ananassa HOM05D001670 ORTHO05D002980 4.9e-23 111.7 143 42.7
FAN01G0667 Fragaria x ananassa HOM05D001670 ORTHO05D002980 6.5e-23 111.3 143 42.7
Duzib133G0195 Durio zibethinus HOM05D001670 ORTHO05D002980 1.1e-22 110.5 142 43.7
Cc02_g24610 Coffea canephora HOM05D001670 ORTHO05D002980 1.4e-22 110.2 146 41.8
Eucgr.E01609 Eucalyptus grandis HOM05D001670 ORTHO05D002980 1.4e-22 110.2 151 38.4
MD02G1214300 Malus domestica HOM05D001670 ORTHO05D002980 1.4e-22 110.2 141 43.3
Glyma.03G118400 Glycine max HOM05D001670 ORTHO05D002980 2.5e-22 109.4 142 42.3
Phvul.010G056800 Phaseolus vulgaris HOM05D001670 ORTHO05D002980 3.2e-22 109.0 142 40.1
Sc13g0006690 Simmondsia chinensis HOM05D001670 ORTHO05D002980 3.2e-22 109.0 132 44.7
MBI02_g32970_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 7.1e-22 107.8 94 63.8
Glyma.07G108700 Glycine max HOM05D001670 ORTHO05D002980 1.2e-21 107.1 142 39.4
Sed0002470 Sechium edule HOM05D001670 ORTHO05D002980 1.2e-21 107.1 142 39.4
Psat4g209400 Pisum sativum HOM05D001670 ORTHO05D002980 2.7e-21 105.9 143 38.5
GSVIVG01018178001 Vitis vinifera HOM05D001670 ORTHO05D002980 2.7e-21 105.9 141 40.4
COL.COLO4_12469 Corchorus olitorius HOM05D001670 ORTHO05D002980 3.5e-21 105.5 142 43.7
TWI14G1227 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 3.5e-21 105.5 142 38.0
TPR.G28734 Trifolium pratense HOM05D001670 ORTHO05D002980 4.6e-21 105.1 143 37.8
vmacro21039 Vaccinium macrocarpon HOM05D001670 ORTHO05D002980 6.0e-21 104.8 142 44.4
arahy.Tifrunner.gnm1.ann1.1V1Y36 Arachis hypogaea HOM05D001670 ORTHO05D002980 7.9e-21 104.4 142 39.4
Thecc.01G385600 Theobroma cacao HOM05D001670 ORTHO05D002980 7.9e-21 104.4 142 41.5
CDE11G0683 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 1.0e-20 104.0 142 40.1
Oeu000038.3 Olea europaea HOM05D001670 ORTHO05D002980 1.0e-20 104.0 143 37.8
VMungo0331G0876 Vigna mungo HOM05D001670 ORTHO05D002980 1.0e-20 104.0 142 40.1
CSS0023490 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.3e-20 103.6 144 41.7
CSS0045110 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.3e-20 103.6 144 41.7
Oeu064574.1 Olea europaea HOM05D001670 ORTHO05D002980 1.3e-20 103.6 143 37.8
PGR042G0136 Punica granatum HOM05D001670 ORTHO05D002980 1.3e-20 103.6 142 39.4
Duzib268G0141 Durio zibethinus HOM05D001670 ORTHO05D002980 1.8e-20 103.2 146 39.7
arahy.Tifrunner.gnm1.ann1.5NE8AH Arachis hypogaea HOM05D001670 ORTHO05D002980 2.3e-20 102.8 142 38.7
SGA_v2.0_scaffold153G36957 Striga asiatica HOM05D001670 ORTHO05D002980 2.3e-20 102.8 135 39.3
Lj9C563G7 Lonicera japonica HOM05D001670 ORTHO05D002980 3.0e-20 102.4 142 40.1
Rhsim01G0135600 Rhododendron simsii HOM05D001670 ORTHO05D002980 3.0e-20 102.4 142 43.7
Gorai.008G107100 Gossypium raimondii HOM05D001670 ORTHO05D002980 6.7e-20 101.3 142 39.4
Lj7C538G19 Lonicera japonica HOM05D001670 ORTHO05D002980 6.7e-20 101.3 132 43.9
Lj3g0005567 Lotus japonicus HOM05D001670 ORTHO05D002980 6.7e-20 101.3 142 39.4
Cpa.g.sc914.1 Carica papaya HOM05D001670 ORTHO05D002980 8.7e-20 100.9 142 38.0
Duzib068G1107 Durio zibethinus HOM05D001670 ORTHO05D002980 1.1e-19 100.5 154 40.3
TWI59G0301 Tripterygium wilfordii HOM05D001670 ORTHO05D002980 1.5e-19 100.1 142 37.3
ATR0317G075 Amborella trichopoda HOM05D001670 ORTHO05D002980 1.9e-19 99.8 148 37.2
CSS0019437 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D011598 1.9e-19 99.8 79 64.6
Hund17061 Selenicereus undatus HOM05D001670 ORTHO05D002980 1.9e-19 99.8 145 37.9
Gorai.007G088100 Gossypium raimondii HOM05D001670 ORTHO05D002980 5.7e-19 98.2 142 38.7
Peaxi162Scf00377g00038 Petunia axillaris HOM05D001670 ORTHO05D002980 7.4e-19 97.8 147 36.7
Migut.B01578 Erythranthe guttata HOM05D001670 ORTHO05D002980 1.3e-18 97.1 142 38.0
Gohir.D11G082433 Gossypium hirsutum HOM05D001670 ORTHO05D002980 1.3e-18 97.1 142 38.0
SGA_v2.0_scaffold399G50813 Striga asiatica HOM05D001670 ORTHO05D002980 1.3e-18 97.1 133 42.9
CSS0045688 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D011598 1.6e-18 96.7 71 67.6
HPP92_007431 Vanilla planifolia HOM05D001670 ORTHO05D002980 2.2e-18 96.3 123 45.5
DCAR_015867 Daucus carota HOM05D001670 ORTHO05D002980 2.8e-18 95.9 142 37.3
Ca_23116_v3 Cicer arietinum L. HOM05D001670 ORTHO05D002980 3.7e-18 95.5 143 37.1
MSTRG.20721 Avicennia marina HOM05D001670 ORTHO05D002980 6.3e-18 94.7 131 42.0
MBI18_g37247_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.1e-17 94.0 77 63.6
Os10g0556700 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D002980 2.4e-17 92.8 122 37.7
CAN.G899.12 Capsicum annuum HOM05D001670 ORTHO05D002980 1.2e-16 90.5 147 36.1
Nitab4.5_0000706g0120 Nicotiana tabacum HOM05D001670 ORTHO05D002980 1.5e-16 90.1 147 34.0
Lalb_Chr13g0290371 Lupinus albus HOM05D001670 ORTHO05D002980 3.4e-16 89.0 148 34.5
Nitab4.5_0002304g0030 Nicotiana tabacum HOM05D001670 ORTHO05D002980 3.4e-16 89.0 147 34.7
SalBow5G2000 Salvia bowleyana HOM05D001670 ORTHO05D002980 3.4e-16 89.0 135 35.6
Lalb_Chr07g0195691 Lupinus albus HOM05D001670 ORTHO05D002980 5.9e-16 88.2 148 34.5
CiPaw.13G031300 Carya illinoinensis HOM05D001670 ORTHO05D002980 1.0e-15 87.4 76 55.3
MBI13_g35169_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.0e-15 87.4 73 63.0
DCAR_025093 Daucus carota HOM05D001670 ORTHO05D002980 1.3e-15 87.0 139 36.7
MELO3C005963.2 Cucumis melo HOM05D001670 ORTHO05D002980 2.9e-15 85.9 76 57.9
THA.LOC104801485 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 2.9e-15 85.9 141 36.2
Rhsim03G0135100 Rhododendron simsii HOM05D001670 ORTHO05D011598 6.5e-15 84.7 77 53.2
CSS0024398 Camellia sinensis var. sinensis HOM05D001670 ORTHO05D002980 1.1e-14 84.0 76 57.9
THA.LOC104814077 Tarenaya hassleriana HOM05D001670 ORTHO05D002980 1.4e-14 83.6 147 33.3
CDE09G0971 Ceratophyllum demersum HOM05D001670 ORTHO05D002980 1.9e-14 83.2 76 57.9
Sopen01g036510 Solanum pennellii HOM05D001670 ORTHO05D002980 2.5e-14 82.8 147 33.3
Os03g0102300 Oryza sativa ssp. japonica HOM05D001670 ORTHO05D011598 3.2e-14 82.4 124 38.7
unitig_0.g1315 Utricularia gibba HOM05D001670 ORTHO05D002980 4.2e-14 82.0 118 37.3
Sp1g00220 Schrenkiella parvula HOM05D001670 ORTHO05D002980 5.5e-14 81.6 143 34.3
Solyc01g090780.3 Solanum lycopersicum HOM05D001670 ORTHO05D002980 5.5e-14 81.6 147 32.7
ECA236G0609 Erigeron canadensis HOM05D001670 ORTHO05D002980 1.2e-13 80.5 142 30.3
HanXRQChr04g0123421 Helianthus annuus HOM05D001670 ORTHO05D002980 1.2e-13 80.5 147 31.3
HanXRQChr06g0168951 Helianthus annuus HOM05D001670 ORTHO05D002980 1.6e-13 80.1 147 31.3
MBI15_g06578_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 1.6e-13 80.1 73 58.9
Thhalv10006521m.g Eutrema salsugineum HOM05D001670 ORTHO05D002980 1.0e-12 77.4 142 33.8
Pp3c21_18770 Physcomitrium patens HOM05D001670 ORTHO05D002980 2.3e-12 76.3 150 31.3
Lsat_1_v5_gn_7_10221 Lactuca sativa HOM05D001670 ORTHO05D002980 3.9e-12 75.5 147 30.6
Zm00001eb404410 Zea mays HOM05D001670 ORTHO05D002980 6.7e-12 74.7 128 35.2
Gohir.D12G098300 Gossypium hirsutum HOM05D001670 ORTHO05D002980 8.8e-12 74.3 76 51.3
Zm00001eb000340 Zea mays HOM05D001670 ORTHO05D002980 1.1e-11 73.9 128 34.4
CARHR248060 Cardamine hirsuta HOM05D001670 ORTHO05D002980 2.5e-11 72.8 143 32.2
AL1G10200 Arabidopsis lyrata HOM05D001670 ORTHO05D002980 1.3e-10 70.5 142 31.0
Aa31LG1G11410 Aethionema arabicum HOM05D001670 ORTHO05D002980 1.7e-10 70.1 142 31.7
A10p00140 Brassica napus HOM05D001670 ORTHO05D002980 4.8e-10 68.6 76 44.7
BraA10t42293Z Brassica rapa HOM05D001670 ORTHO05D002980 4.8e-10 68.6 76 44.7
BcaNung05012 Brassica carinata HOM05D001670 ORTHO05D002980 8.2e-10 67.8 133 33.8
A09p69240 Brassica napus HOM05D001670 ORTHO05D002980 8.2e-10 67.8 133 33.8
C08p54060 Brassica napus HOM05D001670 ORTHO05D002980 8.2e-10 67.8 133 33.8
BolC8t52916H Brassica oleracea HOM05D001670 ORTHO05D002980 8.2e-10 67.8 133 33.8
BraA09t42277Z Brassica rapa HOM05D001670 ORTHO05D002980 8.2e-10 67.8 133 33.8
BcaC07g42342 Brassica carinata HOM05D001670 ORTHO05D002980 1.4e-09 67.0 132 32.6
C05p00130 Brassica napus HOM05D001670 ORTHO05D002980 2.4e-09 66.2 76 43.4
BolC5t28803H Brassica oleracea HOM05D001670 ORTHO05D002980 5.3e-09 65.1 76 43.4
PSO421G0693 Papaver somniferum HOM05D001670 ORTHO05D002980 5.3e-09 65.1 138 31.2
BcaB02g07859 Brassica carinata HOM05D001670 ORTHO05D002980 1.5e-08 63.5 143 32.9
A07p21180 Brassica napus HOM05D001670 ORTHO05D002980 1.5e-08 63.5 132 31.8
BraA07t29805Z Brassica rapa HOM05D001670 ORTHO05D002980 1.5e-08 63.5 132 31.8
Carub.0001s0015 Capsella rubella HOM05D001670 ORTHO05D002980 1.5e-08 63.5 143 32.2
CARHR000250 Cardamine hirsuta HOM05D001670 ORTHO05D002980 1.5e-08 63.5 76 39.5
Mapoly0037s0011 Marchantia polymorpha HOM05D001670 ORTHO05D002980 2.0e-08 63.2 157 28.7
PSO104G0201 Papaver somniferum HOM05D001670 ORTHO05D002980 2.0e-08 63.2 142 29.6
AT1G02080 Arabidopsis thaliana HOM05D001670 ORTHO05D002980 4.5e-08 62.0 142 28.2
BolC6t37249H Brassica oleracea HOM05D001670 ORTHO05D002980 5.9e-08 61.6 86 38.4
BcaC08g44594 Brassica carinata HOM05D001670 ORTHO05D002980 1.0e-07 60.8 66 42.4
C06p20660 Brassica napus HOM05D001670 ORTHO05D002980 1.0e-07 60.8 66 42.4
BcaB03g13629 Brassica carinata HOM05D001670 ORTHO05D002980 1.3e-07 60.5 74 44.6
MBI05_g15359_MAGBIO Magnolia biondii HOM05D003323 ORTHO05D011598 1.7e-07 60.1 28 89.3
Oeu061519.1 Olea europaea HOM05D001670 ORTHO05D002980 6.5e-07 58.2 143 28.0
MBI15_g40133_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 4.2e-06 55.5 66 50.0
Lj1A427G6 Lonicera japonica HOM05D001670 ORTHO05D011598 7.2e-06 54.7 80 37.5
MBI14_g39940_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 7.2e-06 54.7 43 55.8
MBI14_g28585_MAGBIO Magnolia biondii HOM05D011668 ORTHO05D011598 9.4e-06 54.3 47 53.2
MBI15_g31883_MAGBIO Magnolia biondii HOM05D011668 ORTHO05D011598 9.4e-06 54.3 47 53.2


User provided reference genes

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